FFCP PHASE1:Hg19::chrX:151903253..151903273,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158511 | |EntrezGene=158511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24294 | |HGNC=24294 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PB30 | |UniProt=Q6PB30 | ||
|association_with_transcript=0bp_to_ENST00000361211,ENST00000370291,ENST00000452779_5end | |association_with_transcript=0bp_to_ENST00000361211,ENST00000370291,ENST00000452779_5end | ||
|cluster_id=chrX:151903253..151903273,+ | |||
|coexpression_cluster_id=C2956 | |||
|description=CAGE_peak_2_at_CSAG1_5end | |description=CAGE_peak_2_at_CSAG1_5end | ||
|id=chrX:151903253..151903273,+ | |id=chrX:151903253..151903273,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.63e-19;29 | |||
|ontology_enrichment_disease=DOID:162!6.65e-20!235;DOID:14566!4.88e-19!239;DOID:0050687!1.52e-18!143;DOID:305!2.61e-13!106;DOID:0050686!4.83e-08!137;DOID:0050615!7.84e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1115;3.82e-11;20!DOID:0050615;2.19e-08;16!DOID:201;8.26e-08;6!DOID:0060100;8.26e-08;6!DOID:0050687;1.05e-07;143!DOID:5409;2.04e-07;4!DOID:1325;3.14e-07;7!DOID:3904;3.14e-07;7!DOID:1324;7.31e-07;15!DOID:305;7.41e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.82e-32,235;DOID:14566,4.34e-31,239;DOID:0050687,7.46e-25,143;DOID:305,3.12e-17,106;DOID:0050686,8.63e-15,137;DOID:1115,3.92e-11,20;DOID:0050615,2.27e-08,16;DOID:201,9.05e-08,6;DOID:0060100,9.05e-08,6;DOID:5409,2.07e-07,4;DOID:1325,3.20e-07,7;DOID:3904,3.20e-07,7;DOID:1324,7.59e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000955!5.47e-19!69;UBERON:0006238!5.47e-19!69;UBERON:0001049!1.03e-17!57;UBERON:0005068!1.03e-17!57;UBERON:0006241!1.03e-17!57;UBERON:0007135!1.03e-17!57;UBERON:0001017!2.26e-17!82;UBERON:0005743!5.33e-17!86;UBERON:0002616!8.43e-17!59;UBERON:0000073!2.54e-15!94;UBERON:0001016!2.54e-15!94;UBERON:0002780!3.95e-15!41;UBERON:0001890!3.95e-15!41;UBERON:0006240!3.95e-15!41;UBERON:0003080!1.30e-14!42;UBERON:0001737!4.30e-14!9;UBERON:0001893!4.35e-13!34;UBERON:0002020!4.71e-13!34;UBERON:0003528!4.71e-13!34;UBERON:0002619!6.13e-13!22;UBERON:0001950!7.07e-13!20;UBERON:0002791!3.65e-12!33;UBERON:0001869!1.78e-11!32;UBERON:0003075!4.69e-11!86;UBERON:0007284!4.69e-11!86;UBERON:0000956!6.05e-11!25;UBERON:0000203!6.05e-11!25;UBERON:0002346!3.62e-10!90;UBERON:0003056!7.55e-09!61;UBERON:0008947!2.28e-08!38;UBERON:0003258!2.28e-08!38;UBERON:0000033!1.19e-07!123;UBERON:0007023!1.87e-07!115;UBERON:0002021!6.54e-07!5;UBERON:0000153!6.98e-07!129;UBERON:0007811!6.98e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.48e-24;9!UBERON:0001557;5.48e-24;9!UBERON:0000072;4.70e-13;37!UBERON:0000065;1.18e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.25e-24,9;UBERON:0008947,9.76e-14,38;UBERON:0003258,9.76e-14,38;UBERON:0001557,1.80e-10,19;UBERON:0000072,2.02e-10,47;UBERON:0000065,1.27e-08,54 | |||
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| ||
|short_description=p2@CSAG1 | |short_description=p2@CSAG1 | ||
}} | }} |
Latest revision as of 23:00, 19 September 2015
Short description: | p2@CSAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSAG1_5end |
Coexpression cluster: | C2956_endometrial_nonsmall_cholangiocellular_liposarcoma_lymphangiectasia_medulloblastoma_melanoma |
Association with transcript: | 0bp_to_ENST00000361211, ENST00000370291, ENST00000452779_5end |
EntrezGene: | CSAG1 |
HGNC: | 24294 |
UniProt: | Q6PB30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.25e-24 | 9 |
respiratory primordium | 9.76e-14 | 38 |
endoderm of foregut | 9.76e-14 | 38 |
upper respiratory tract | 1.80e-10 | 19 |
segment of respiratory tract | 2.02e-10 | 47 |
respiratory tract | 1.27e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.82e-32 | 235 |
disease of cellular proliferation | 4.34e-31 | 239 |
cell type cancer | 7.46e-25 | 143 |
carcinoma | 3.12e-17 | 106 |
organ system cancer | 8.63e-15 | 137 |
sarcoma | 3.92e-11 | 20 |
respiratory system cancer | 2.27e-08 | 16 |
connective tissue cancer | 9.05e-08 | 6 |
musculoskeletal system cancer | 9.05e-08 | 6 |
lung small cell carcinoma | 2.07e-07 | 4 |
bronchus cancer | 3.20e-07 | 7 |
bronchogenic carcinoma | 3.20e-07 | 7 |
lung cancer | 7.59e-07 | 15 |