FFCP PHASE1:Hg19::chr3:129324660..129324676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:129324660..129324676,+ | |||
|coexpression_cluster_id=C4280 | |||
|description=CAGE_peak_at_chr3:129324660..129324676,+ | |description=CAGE_peak_at_chr3:129324660..129324676,+ | ||
|id=chr3:129324660..129324676,+ | |id=chr3:129324660..129324676,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.21e-16!35;CL:0002078!2.35e-13!44;CL:0002139!2.57e-10!24;CL:0000213!2.68e-09!57;CL:0000215!2.68e-09!57;CL:0000057!2.49e-08!75;CL:0000222!2.51e-07!119;CL:0000055!2.64e-07!180;CL:0000071!6.08e-07!18;CL:0002546!6.08e-07!18 | |ontology_enrichment_celltype=CL:0000115!3.21e-16!35;CL:0002078!2.35e-13!44;CL:0002139!2.57e-10!24;CL:0000213!2.68e-09!57;CL:0000215!2.68e-09!57;CL:0000057!2.49e-08!75;CL:0000222!2.51e-07!119;CL:0000055!2.64e-07!180;CL:0000071!6.08e-07!18;CL:0002546!6.08e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.48e-17;36!CL:0002139;2.73e-12;24!CL:0002078;8.57e-12;45!CL:0000071;5.08e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.96e-21,36;CL:0002078,1.94e-17,45;CL:0002139,1.74e-12,24;CL:0000213,5.45e-11,58;CL:0000215,5.45e-11,58;CL:0000071,3.31e-08,18;CL:0002546,3.31e-08,18;CL:0000222,7.05e-08,121;CL:0000057,2.01e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;5.08e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.08e-07!18;UBERON:0004638!6.08e-07!18;UBERON:0004852!6.08e-07!18 | |ontology_enrichment_uberon=UBERON:0001986!6.08e-07!18;UBERON:0004638!6.08e-07!18;UBERON:0004852!6.08e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.08e-08;18!UBERON:0001986;5.08e-08;18!UBERON:0004852;5.08e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.31e-08,18;UBERON:0001986,3.31e-08,18;UBERON:0004852,3.31e-08,18 | |||
|phase1_expression=6.17706489519893,8.13581990785736,4.79244973926302,5.00366491765652,6.70441641640932,9.59572376510406,0,3.15859936713415,8.61912573059467,0.491467873003018,1.39560233594486,2.62129646556207,1.58260186937072,0.990130823680373,1.32558950291166,0,0.602694528023977,0,0.487932798790507,1.23121058076788,2.44800829493104,1.56727360739044,0.572471974262113,4.51685602740518,6.90484517771415,0,0,0,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0,0,0.293600439334847,1.10799081706375,1.60435557976113,1.95309783644267,11.6436046604761,7.12566065241755,3.60605794687861,0.581592955118259,0,0.970336244751265,0.929716147622738,0.411167888021826,0.619412741790207,1.1507695692886,0.256160706529101,0,0.344745680736619,0,1.35426486594342,1.31769637679823,0.818718450173537,0,0.612167784741805,0,0,0.659702600373432,0.997318288108159,0.426224750532694,0.870627715885752,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0,0,0.633765858935825,1.06302149982522,0.209658645508376,0.673971786878971,1.20141514273205,0.803627933485401,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,1.17903228824749,0.616804496998528,0,0,0,0,0.222820913770347,0,0,0,0.512365278902701,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,2.01606743224732,3.7441627409691,1.73789284659359,0,4.02420515822182,1.79007586580942,0,0.50133791063589,2.02785126545153,0,0,0.567208902984407,1.77383517970051,1.22968699970376,1.24430121722827,0,0,3.24547393654683,2.96020553408754,7.44564578905645,0.238490624305342,0,0.371457501329565,0.39752481473341,2.58070378531837,7.98423153697467,1.69592382577203,19.7164735018656,15.1314923067037,0.626984899610432,7.75250277507987,8.89415656716776,5.69025041699939,8.45941565929209,1.52054421143703,18.7927784312091,2.94130464276695,24.3042584364528,4.37568668591991,4.71511682514957,4.50445921933289,3.06633274931766,0,8.24407847686833,0,0,0,10.933382937297,0.759783069987479,0.794455084879313,2.58152958673932,3.19201543978521,0,0,2.71334303258876,0.311211035399766,4.98429486657846,4.41347138406339,2.27036141467397,4.60940739583999,1.40592859100278,3.1216007683032,0.570471821544449,3.28787097213962,0.352303495931295,0.647491777472526,1.26405726032024,0.816616685019573,1.96534907698829,2.9964476540972,2.37600571456411,2.47266929278557,0,0.718618141816238,1.5150250255866,1.62654075833553,0,0,0.612975591598039,1.35214253015937,1.47461838108027,3.7671823494661,1.06778694409284,1.90738711043606,1.50045548042201,0.618315175430633,3.34932702059318,3.16398655763703,1.68776332241266,0.584622030967192,1.51460264546469,0.552299391853796,0.969876340912871,2.4850671476163,0.503760491138201,2.20428770003634,0,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.518305275076852,1.7662459561294,0,0,7.71889125831462,0,3.71494342425583,3.60939740834793,2.24782920075703,1.68584690078102,2.16909926895134,2.31617342738027,2.17879444092406,0.71181185733329,1.21348177344148,1.76599318612811,1.53898862778556,13.2867981832437,18.231430594448,2.8810180793198,2.94017422771084,0,0.982827216677626,1.18157981336281,0,0,0.686271241194102,0,0,0,0.0925884451585296,1.3032332212413,3.11980435583874,1.44331342025273,1.15930404975077,0.352226082707465,6.49649014924832,9.25971025153221,5.89787871927255,8.69224837755203,4.29243081047436,11.0797652739329,7.02012795417713,16.4980590140488,0,0,0,0,0,0,0,1.23267807618516,0.621984346622316,0.576479813667846,1.13618190083742,0.888970520090367,0,1.17217447210047,0,2.67351481028641,2.70308752059526,1.71495859578347,1.12131084345361,0.43596006883328,1.466765716419,0.258543431515556,42.9187735022259,3.381211010224,1.86156681609409,2.08014873822732,1.54324424557285,4.25547396069835,0.532844358032199,2.14466990487221,7.5967024754802,1.64648067356154,1.62868092146868,2.13235169245527,0.791951872933429,0,0,0.399891964728228,13.378615870531,13.0586843772353,23.1917333431335,1.4377491329495,2.29723871668228,0,0.723906533337896,1.84928690295345,1.07436577943937,0,0.197030760201927,0.862510299438069,2.05348858047597,0.254094624222463,0,0.773288812777695,1.00509759200609,1.91381625495949,0.749007023947182,0,0,2.08575535922538,8.50289885801451,2.98391526069709,6.44709670745502,7.13715955188647,5.36188211115378,4.09994952474496,0.300946099727719,0,2.0694614258501,0.664225598535437,0.184369168541703,1.65078867489357,9.98585903059977,10.9805895619474,0.620304078368662,0.862856803274467,1.60091336705167,1.81876542867756,3.32870879020994,1.20956117331872,5.95458738765064,5.21770709179412,10.6650835884568,5.12556597022804,3.07024349440022,11.903190164627,5.93672265779964,0.308419387605311,3.01854933032316,0.328508624055237,1.03850885836724,1.74315567689939,0,0,0,0.459257792658427,0.182091168006717,1.18011973463482,0.451199612907412,0.847168708148562,3.92174884588428,4.38417673959782,0.949964660035881,17.0600076106345,7.48412303216669,8.63663664408557,13.880452742126,2.98041081298238,4.51520796469368,0,1.66215201785745,2.0148727924996,0,0,0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| ||
|short_description=p@chr3:129324660..129324676,+ | |short_description=p@chr3:129324660..129324676,+ | ||
}} | }} |
Latest revision as of 15:44, 29 July 2015
Short description: | p@chr3:129324660..129324676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:129324660..129324676, + |
Coexpression cluster: | C4280_Renal_Mesenchymal_Hepatic_Endothelial_Macrophage_CD14_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.96e-21 | 36 |
meso-epithelial cell | 1.94e-17 | 45 |
endothelial cell of vascular tree | 1.74e-12 | 24 |
lining cell | 5.45e-11 | 58 |
barrier cell | 5.45e-11 | 58 |
blood vessel endothelial cell | 3.31e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.31e-08 | 18 |
mesodermal cell | 7.05e-08 | 121 |
fibroblast | 2.01e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.31e-08 | 18 |
endothelium | 3.31e-08 | 18 |
cardiovascular system endothelium | 3.31e-08 | 18 |