FFCP PHASE1:Hg19::chr3:186714356..186714377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000485105_5end | |association_with_transcript=-32bp_to_ENST00000485105_5end | ||
|cluster_id=chr3:186714356..186714377,+ | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_6_at_ST6GAL1_5end | |description=CAGE_peak_6_at_ST6GAL1_5end | ||
|id=chr3:186714356..186714377,+ | |id=chr3:186714356..186714377,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.33e-26!24;CL:0000826!2.33e-26!24;CL:0000236!9.11e-17!14;CL:0000738!6.76e-14!140;CL:0002087!1.51e-12!119;CL:0000542!3.12e-12!53;CL:0000051!3.12e-12!53;CL:0000838!2.10e-11!52;CL:0002031!5.10e-10!124;CL:0000037!7.35e-10!172;CL:0000566!7.35e-10!172;CL:0000988!1.37e-08!182;CL:0002032!8.92e-08!165;CL:0000837!8.92e-08!165 | |ontology_enrichment_celltype=CL:0000945!2.33e-26!24;CL:0000826!2.33e-26!24;CL:0000236!9.11e-17!14;CL:0000738!6.76e-14!140;CL:0002087!1.51e-12!119;CL:0000542!3.12e-12!53;CL:0000051!3.12e-12!53;CL:0000838!2.10e-11!52;CL:0002031!5.10e-10!124;CL:0000037!7.35e-10!172;CL:0000566!7.35e-10!172;CL:0000988!1.37e-08!182;CL:0002032!8.92e-08!165;CL:0000837!8.92e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.25e-32;24!CL:0000236;3.19e-27;13!CL:0000542;1.61e-09;53!CL:0000784;7.15e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.13e-32,24;CL:0000826,1.13e-32,24;CL:0000236,7.92e-30,14;CL:0000542,8.01e-14,53;CL:0000051,8.01e-14,53;CL:0000838,1.41e-12,52;CL:0000784,6.58e-09,3;CL:0000738,2.84e-08,136;CL:0002087,3.42e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.61e-09;53!UBERON:0004872;5.89e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-38!115;UBERON:0000178!3.20e-13!15;UBERON:0000179!3.20e-13!15;UBERON:0000463!3.20e-13!15;UBERON:0002390!2.62e-08!102;UBERON:0003061!2.62e-08!102;UBERON:0002193!3.20e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.44e-17;15!UBERON:0000179;7.44e-17;15!UBERON:0000463;7.44e-17;15!UBERON:0002390;3.80e-11;32!UBERON:0002193;5.04e-08;42!UBERON:0004921;6.30e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.04e-21,114;UBERON:0000178,7.79e-17,15;UBERON:0000179,7.79e-17,15;UBERON:0000463,7.79e-17,15 | |||
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| ||
|short_description=p6@ST6GAL1 | |short_description=p6@ST6GAL1 | ||
}} | }} |
Latest revision as of 06:01, 17 September 2015
Short description: | p6@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ST6GAL1_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | -32bp_to_ENST00000485105_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.13e-32 | 24 |
pro-B cell | 1.13e-32 | 24 |
B cell | 7.92e-30 | 14 |
lymphocyte | 8.01e-14 | 53 |
common lymphoid progenitor | 8.01e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.41e-12 | 52 |
plasmacytoid dendritic cell | 6.58e-09 | 3 |
leukocyte | 2.84e-08 | 136 |
nongranular leukocyte | 3.42e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.04e-21 | 114 |
blood | 7.79e-17 | 15 |
haemolymphatic fluid | 7.79e-17 | 15 |
organism substance | 7.79e-17 | 15 |