FFCP PHASE1:Hg19::chr15:28344426..28344431,-: Difference between revisions
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|id=chr15:28344426..28344431,-
|short_description=p2@OCA2
|description=CAGE_peak_2_at_OCA2_5end
|association_with_transcript=7bp_to_ENST00000431101_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4948 | |EntrezGene=4948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8101 | |HGNC=8101 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDV3 | |UniProt=C9JDV3 | ||
|association_with_transcript=7bp_to_ENST00000431101_5end | |||
|cluster_id=chr15:28344426..28344431,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_OCA2_5end | |||
|id=chr15:28344426..28344431,- | |||
|ontology_enrichment_celltype=CL:0000148!6.63e-36!10;CL:0000541!6.63e-36!10;CL:0000147!1.97e-25!14;CL:0002567!4.51e-23!3;CL:0000710!1.33e-22!20;CL:0000075!1.87e-16!27;CL:0002077!2.94e-13!33;CL:0000133!2.23e-10!59;CL:0000333!5.38e-10!41;CL:0002566!5.59e-09!1;CL:0000325!1.37e-08!39;CL:0000221!2.14e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.24e-120;10!CL:0000147;6.25e-86;14!CL:0002567;3.54e-74;3!CL:0000710;2.79e-60;20!CL:0000075;9.55e-45;27!CL:0002077;2.41e-31;34!CL:0002566;2.16e-26;1!CL:0000149;1.59e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.06e-120,10;CL:0000541,5.06e-120,10;CL:0000147,7.09e-86,14;CL:0002567,4.55e-74,3;CL:0000710,3.04e-60,20;CL:0000075,1.02e-44,27;CL:0002077,1.42e-35,34;CL:0000333,3.53e-28,41;CL:0002566,2.16e-26,1;CL:0000133,6.47e-20,59;CL:0000221,1.95e-16,72;CL:0000149,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;8.69e-11;59!CL:0000221;4.91e-09;72 | |||
|ontology_enrichment_disease=DOID:1909!1.35e-15!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.37e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.21e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.70e-10!3;UBERON:0005290!1.70e-10!3;UBERON:0010096!1.70e-10!3;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@OCA2 | |||
}} | }} |
Latest revision as of 02:05, 17 September 2015
Short description: | p2@OCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OCA2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 7bp_to_ENST00000431101_5end |
EntrezGene: | OCA2 |
HGNC: | 8101 |
UniProt: | C9JDV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.06e-120 | 10 |
melanoblast | 5.06e-120 | 10 |
pigment cell | 7.09e-86 | 14 |
light melanocyte | 4.55e-74 | 3 |
neurecto-epithelial cell | 3.04e-60 | 20 |
columnar/cuboidal epithelial cell | 1.02e-44 | 27 |
ecto-epithelial cell | 1.42e-35 | 34 |
migratory neural crest cell | 3.53e-28 | 41 |
dark melanocyte | 2.16e-26 | 1 |
neurectodermal cell | 6.47e-20 | 59 |
ectodermal cell | 1.95e-16 | 72 |
visual pigment cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.21e-13 | 2 |