FFCP PHASE1:Hg19::chr3:47932581..47932592,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4134 | |EntrezGene=4134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6862 | |HGNC=6862 | ||
|TSSclassifier=strong | |||
|UniProt=B4DSQ1 | |UniProt=B4DSQ1 | ||
|association_with_transcript=202bp_to_ENST00000441748_5end | |association_with_transcript=202bp_to_ENST00000441748_5end | ||
|cluster_id=chr3:47932581..47932592,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_29_at_MAP4_5end | |description=CAGE_peak_29_at_MAP4_5end | ||
|id=chr3:47932581..47932592,- | |id=chr3:47932581..47932592,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.03e-14;2!UBERON:0006601;1.12e-12;82!UBERON:0006241;2.14e-10;3!UBERON:0003057;2.14e-10;3!UBERON:0006222;3.32e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.28e-98!57;UBERON:0005068!8.28e-98!57;UBERON:0006241!8.28e-98!57;UBERON:0007135!8.28e-98!57;UBERON:0001017!2.54e-87!82;UBERON:0005743!1.09e-86!86;UBERON:0002616!4.59e-84!59;UBERON:0000955!6.97e-78!69;UBERON:0006238!6.97e-78!69;UBERON:0000073!1.03e-77!94;UBERON:0001016!1.03e-77!94;UBERON:0002780!1.02e-74!41;UBERON:0001890!1.02e-74!41;UBERON:0006240!1.02e-74!41;UBERON:0003080!8.41e-73!42;UBERON:0002020!1.48e-72!34;UBERON:0003528!1.48e-72!34;UBERON:0001893!1.48e-72!34;UBERON:0003075!2.90e-72!86;UBERON:0007284!2.90e-72!86;UBERON:0002791!2.62e-69!33;UBERON:0002346!1.16e-68!90;UBERON:0001869!1.02e-65!32;UBERON:0007023!6.13e-58!115;UBERON:0003056!1.55e-51!61;UBERON:0000033!8.99e-45!123;UBERON:0002619!1.25e-43!22;UBERON:0000956!1.19e-42!25;UBERON:0000203!1.19e-42!25;UBERON:0000153!2.80e-42!129;UBERON:0007811!2.80e-42!129;UBERON:0004121!2.10e-39!169;UBERON:0000924!2.81e-38!173;UBERON:0006601!2.81e-38!173;UBERON:0001950!6.14e-37!20;UBERON:0002308!2.69e-33!9;UBERON:0000125!2.69e-33!9;UBERON:0002420!2.00e-26!9;UBERON:0007245!2.00e-26!9;UBERON:0010009!2.00e-26!9;UBERON:0010011!2.00e-26!9;UBERON:0000454!2.00e-26!9;UBERON:0009663!3.85e-26!7;UBERON:0003076!1.19e-24!15;UBERON:0003057!1.19e-24!15;UBERON:0000025!6.84e-24!194;UBERON:0002298!2.97e-23!8;UBERON:0004733!7.61e-20!12;UBERON:0002028!7.61e-20!12;UBERON:0007277!7.61e-20!12;UBERON:0004732!3.28e-18!13;UBERON:0004111!2.10e-17!241;UBERON:0000369!4.16e-16!4;UBERON:0002435!4.16e-16!4;UBERON:0000204!4.16e-16!4;UBERON:0010082!4.16e-16!4;UBERON:0000200!1.93e-15!6;UBERON:0000483!3.69e-14!309;UBERON:0000477!3.92e-14!286;UBERON:0000119!6.28e-14!312;UBERON:0000349!5.42e-13!5;UBERON:0001896!7.75e-13!3;UBERON:0005290!7.75e-13!3;UBERON:0010096!7.75e-13!3;UBERON:0000064!7.77e-13!219;UBERON:0005383!1.19e-12!3;UBERON:0005382!1.19e-12!3;UBERON:0000988!1.76e-12!3;UBERON:0002021!3.60e-12!5;UBERON:0001872!4.17e-12!5;UBERON:0000475!4.35e-12!365;UBERON:0006331!4.74e-12!3;UBERON:0002771!6.41e-12!3;UBERON:0001871!7.03e-12!7;UBERON:0002680!1.25e-10!9;UBERON:0001895!1.25e-10!9;UBERON:0010092!1.25e-10!9;UBERON:0001897!2.88e-09!2;UBERON:0001954!5.42e-09!2;UBERON:0003022!5.42e-09!2;UBERON:0002421!5.42e-09!2;UBERON:0002600!5.42e-09!2;UBERON:0001873!6.33e-09!2;UBERON:0010122!6.33e-09!2;UBERON:0002148!7.12e-09!2;UBERON:0009662!7.12e-09!2;UBERON:0000062!9.58e-09!511;UBERON:0001875!1.32e-08!2;UBERON:0006514!1.32e-08!2;UBERON:0002360!5.45e-08!2;UBERON:0000094!5.45e-08!2;UBERON:0007645!5.45e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.46e-45;53!UBERON:0002616;5.46e-45;53!UBERON:0002780;8.23e-41;41!UBERON:0001890;8.23e-41;41!UBERON:0003528;2.78e-40;34!UBERON:0002020;2.78e-40;34!UBERON:0002791;1.61e-38;32!UBERON:0001893;4.85e-38;34!UBERON:0001869;2.69e-37;32!UBERON:0002298;4.19e-29;6!UBERON:0002619;5.07e-28;22!UBERON:0000369;1.25e-27;4!UBERON:0002435;1.25e-27;4!UBERON:0000204;1.25e-27;4!UBERON:0000125;3.44e-27;9!UBERON:0002308;3.44e-27;9!UBERON:0002420;6.53e-27;9!UBERON:0007245;6.53e-27;9!UBERON:0010009;6.53e-27;9!UBERON:0010011;6.53e-27;9!UBERON:0000454;6.53e-27;9!UBERON:0001017;1.88e-26;75!UBERON:0000956;1.33e-24;25!UBERON:0000203;1.33e-24;25!UBERON:0009663;2.45e-24;7!UBERON:0000955;1.28e-23;68!UBERON:0000349;3.65e-22;5!UBERON:0001896;1.34e-21;3!UBERON:0005290;1.34e-21;3!UBERON:0005383;3.55e-21;3!UBERON:0005382;3.55e-21;3!UBERON:0004733;1.05e-20;12!UBERON:0002028;1.05e-20;12!UBERON:0001016;1.93e-20;83!UBERON:0001950;9.46e-20;20!UBERON:0004732;4.48e-19;13!UBERON:0001897;3.86e-15;2!UBERON:0010225;3.86e-15;2!UBERON:0001873;1.03e-14;2!UBERON:0001954;1.03e-14;2!UBERON:0003022;1.03e-14;2!UBERON:0002421;1.03e-14;2!UBERON:0002600;1.03e-14;2!UBERON:0007023;5.67e-13;114!UBERON:0000988;2.14e-10;3!UBERON:0002240;2.14e-10;3!UBERON:0005174;2.14e-10;3!UBERON:0001137;2.14e-10;3!UBERON:0001870;4.10e-10;3!UBERON:0001894;1.44e-09;7!UBERON:0001871;2.17e-09;6!UBERON:0011216;4.73e-09;132!UBERON:0002336;9.76e-09;1!UBERON:0011215;9.76e-09;1!UBERON:0001018;9.76e-09;1!UBERON:0002473;9.76e-09;1!UBERON:0005340;9.76e-09;1!UBERON:0003544;9.76e-09;1!UBERON:0005970;9.76e-09;1!UBERON:0002316;9.76e-09;1!UBERON:0001020;9.76e-09;1!UBERON:0002437;9.76e-09;1!UBERON:0001882;3.32e-08;1!UBERON:0002022;3.32e-08;1!UBERON:0001874;3.32e-08;1!UBERON:0005403;3.32e-08;1!UBERON:0010314;4.54e-08;132!UBERON:0002784;5.25e-08;4!UBERON:0002680;1.11e-07;9!UBERON:0001895;1.11e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.44e-84,56;UBERON:0005068,8.44e-84,56;UBERON:0006241,8.44e-84,56;UBERON:0007135,8.44e-84,56;UBERON:0000073,2.68e-75,53;UBERON:0002616,2.68e-75,53;UBERON:0001017,1.79e-65,81;UBERON:0000955,3.62e-62,68;UBERON:0006238,3.62e-62,68;UBERON:0001016,1.23e-58,89;UBERON:0003075,3.43e-56,82;UBERON:0007284,3.43e-56,82;UBERON:0002780,4.53e-55,41;UBERON:0001890,4.53e-55,41;UBERON:0003080,4.53e-55,41;UBERON:0006240,4.53e-55,41;UBERON:0002346,2.09e-53,86;UBERON:0001893,1.21e-46,34;UBERON:0003528,1.29e-46,34;UBERON:0002020,1.29e-46,34;UBERON:0010371,1.71e-43,104;UBERON:0002791,3.00e-43,32;UBERON:0001869,3.00e-43,32;UBERON:0007023,8.88e-37,114;UBERON:0003056,3.77e-36,61;UBERON:0010314,2.14e-33,132;UBERON:0002298,2.99e-29,6;UBERON:0003076,3.79e-29,15;UBERON:0003057,3.79e-29,15;UBERON:0004121,7.01e-29,171;UBERON:0000924,7.01e-29,171;UBERON:0006601,7.01e-29,171;UBERON:0002619,1.16e-27,22;UBERON:0000369,1.26e-27,4;UBERON:0002435,1.26e-27,4;UBERON:0000204,1.26e-27,4;UBERON:0010082,1.26e-27,4;UBERON:0000125,2.76e-27,9;UBERON:0002308,2.76e-27,9;UBERON:0002420,3.48e-27,9;UBERON:0007245,3.48e-27,9;UBERON:0010009,3.48e-27,9;UBERON:0010011,3.48e-27,9;UBERON:0000454,3.48e-27,9;UBERON:0009663,2.04e-24,7;UBERON:0000956,2.77e-24,25;UBERON:0000203,2.77e-24,25;UBERON:0000349,2.50e-22,5;UBERON:0001896,9.48e-22,3;UBERON:0005290,9.48e-22,3;UBERON:0010096,9.48e-22,3;UBERON:0000025,1.36e-21,192;UBERON:0005383,2.05e-21,3;UBERON:0005382,2.05e-21,3;UBERON:0011216,4.70e-21,223;UBERON:0004733,9.26e-21,12;UBERON:0002028,9.26e-21,12;UBERON:0007277,9.26e-21,12;UBERON:0001950,2.20e-19,20;UBERON:0004732,3.98e-19,13;UBERON:0004111,2.31e-16,240;UBERON:0001897,2.36e-15,2;UBERON:0010225,2.36e-15,2;UBERON:0001954,7.31e-15,2;UBERON:0003022,7.31e-15,2;UBERON:0002421,7.31e-15,2;UBERON:0002600,7.31e-15,2;UBERON:0001873,9.67e-15,2;UBERON:0010122,9.67e-15,2;UBERON:0000483,8.02e-12,306;UBERON:0000119,1.16e-11,309;UBERON:0002240,1.48e-10,3;UBERON:0005174,1.48e-10,3;UBERON:0001137,1.48e-10,3;UBERON:0000988,2.05e-10,3;UBERON:0001870,9.79e-10,3;UBERON:0001894,1.25e-09,7;UBERON:0006222,1.25e-09,7;UBERON:0001871,2.05e-09,6;UBERON:0002336,9.79e-09,1;UBERON:0011215,9.79e-09,1;UBERON:0001018,9.79e-09,1;UBERON:0002473,9.79e-09,1;UBERON:0005340,9.79e-09,1;UBERON:0003544,9.79e-09,1;UBERON:0005970,9.79e-09,1;UBERON:0002316,9.79e-09,1;UBERON:0001020,9.79e-09,1;UBERON:0002437,9.79e-09,1;UBERON:0001874,2.02e-08,1;UBERON:0002022,3.10e-08,1;UBERON:0002784,4.12e-08,4;UBERON:0001882,5.82e-08,1;UBERON:0005403,5.82e-08,1;UBERON:0002680,1.14e-07,9;UBERON:0001895,1.14e-07,9;UBERON:0010092,1.14e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.20596438625408,0,2.10100593869327,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03305098413047,0,1.40558667435203,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0,0,0,0,0,1.57948847310864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45637617086946,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,1.1267183763585,1.72022758707021,1.55300672151593,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,1.27707087245721,0.41023272848151,1.00828678488687,0.96820153449905,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,0.826747186004736,0.887821342714695,0,0,0,0,0,0,0,0,0,0,0,0,1.56330385846713,0.920818829879887,0,0,0,1.72827148907602,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,1.78227840196252,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,1.29183831362738,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,2.89612388413307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,1.77148277162768,1.20596438625408,0,2.10100593869327,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03305098413047,0,1.40558667435203,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0,0,0,0,0,1.57948847310864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45637617086946,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,1.1267183763585,1.72022758707021,1.55300672151593,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,1.27707087245721,0.41023272848151,1.00828678488687,0.96820153449905,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,0.826747186004736,0.887821342714695,0,0,0,0,0,0,0,0,0,0,0,0,1.56330385846713,0.920818829879887,0,0,0,1.72827148907602,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,1.78227840196252,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,1.29183831362738,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,2.89612388413307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p29@MAP4 | |short_description=p29@MAP4 | ||
}} | }} |
Latest revision as of 13:09, 18 September 2015
Short description: | p29@MAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_MAP4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 202bp_to_ENST00000441748_5end |
EntrezGene: | MAP4 |
HGNC: | 6862 |
UniProt: | B4DSQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data