FFCP PHASE1:Hg19::chr3:48264976..48265003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=820 | |EntrezGene=820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1472 | |HGNC=1472 | ||
|TSSclassifier=strong | |||
|UniProt=P49913 | |UniProt=P49913 | ||
|association_with_transcript=114bp_to_uc003csj.1_5end | |association_with_transcript=114bp_to_uc003csj.1_5end | ||
|cluster_id=chr3:48264976..48265003,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_CAMP_5end | |description=CAGE_peak_1_at_CAMP_5end | ||
|id=chr3:48264976..48265003,+ | |id=chr3:48264976..48265003,+ | ||
|ontology_enrichment_celltype=CL:0000766!7.38e-18!76;CL:0000738!3.88e-15!140;CL:0000094!4.90e-13!8;CL:0002194!1.53e-12!63;CL:0000576!1.53e-12!63;CL:0000040!1.53e-12!63;CL:0000559!1.53e-12!63;CL:0002009!6.97e-12!65;CL:0002057!7.84e-12!42;CL:0002087!1.37e-11!119;CL:0000037!2.37e-11!172;CL:0000566!2.37e-11!172;CL:0000860!1.38e-10!45;CL:0000839!2.06e-10!70;CL:0000557!3.81e-10!71;CL:0000763!6.43e-10!112;CL:0000049!6.43e-10!112;CL:0000988!6.93e-10!182;CL:0002032!3.35e-09!165;CL:0000837!3.35e-09!165;CL:0000081!7.06e-09!11;CL:0002031!1.76e-08!124 | |ontology_enrichment_celltype=CL:0000766!7.38e-18!76;CL:0000738!3.88e-15!140;CL:0000094!4.90e-13!8;CL:0002194!1.53e-12!63;CL:0000576!1.53e-12!63;CL:0000040!1.53e-12!63;CL:0000559!1.53e-12!63;CL:0002009!6.97e-12!65;CL:0002057!7.84e-12!42;CL:0002087!1.37e-11!119;CL:0000037!2.37e-11!172;CL:0000566!2.37e-11!172;CL:0000860!1.38e-10!45;CL:0000839!2.06e-10!70;CL:0000557!3.81e-10!71;CL:0000763!6.43e-10!112;CL:0000049!6.43e-10!112;CL:0000988!6.93e-10!182;CL:0002032!3.35e-09!165;CL:0000837!3.35e-09!165;CL:0000081!7.06e-09!11;CL:0002031!1.76e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.23e-28;8!CL:0000081;4.05e-20;11!CL:0000767;1.03e-11;3!CL:0000775;2.23e-11;3!CL:0000771;1.37e-08;2!CL:0000473;7.89e-08;39!CL:0000234;7.89e-08;39!CL:0000575;9.22e-08;2!CL:0000860;5.22e-07;33!CL:0002057;5.22e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.03e-28,8;CL:0000081,3.87e-20,11;CL:0000766,6.62e-14,72;CL:0000767,1.25e-11,3;CL:0000775,1.72e-11,3;CL:0000738,3.39e-10,136;CL:0000763,1.08e-08,108;CL:0000049,1.08e-08,108;CL:0000771,1.38e-08,2;CL:0000575,6.77e-08,2;CL:0000037,6.83e-08,168;CL:0000473,1.77e-07,48;CL:0000234,1.77e-07,48;CL:0000988,3.44e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.16e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.88e-19!102;UBERON:0003061!5.88e-19!102;UBERON:0002193!8.30e-17!112;UBERON:0007023!3.88e-15!115;UBERON:0000178!2.33e-13!15;UBERON:0000179!2.33e-13!15;UBERON:0000463!2.33e-13!15;UBERON:0002371!9.16e-09!80;UBERON:0001474!1.40e-07!86;UBERON:0002405!1.93e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!5.88e-19!102;UBERON:0003061!5.88e-19!102;UBERON:0002193!8.30e-17!112;UBERON:0007023!3.88e-15!115;UBERON:0000178!2.33e-13!15;UBERON:0000179!2.33e-13!15;UBERON:0000463!2.33e-13!15;UBERON:0002371!9.16e-09!80;UBERON:0001474!1.40e-07!86;UBERON:0002405!1.93e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.85e-26;15!UBERON:0000179;3.85e-26;15!UBERON:0000463;3.85e-26;15!UBERON:0002390;1.70e-16;32!UBERON:0002193;1.55e-08;42!UBERON:0002370;1.67e-07;2!UBERON:0005058;1.67e-07;2!UBERON:0009113;1.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.33e-26,15;UBERON:0000179,4.33e-26,15;UBERON:0000463,4.33e-26,15;UBERON:0002390,1.15e-16,98;UBERON:0003061,1.15e-16,98;UBERON:0002193,1.54e-14,108;UBERON:0007023,3.91e-09,114;UBERON:0003081,2.73e-08,203 | |||
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| ||
|short_description=p1@CAMP | |short_description=p1@CAMP | ||
}} | }} |
Latest revision as of 13:47, 18 September 2015
Short description: | p1@CAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAMP_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 114bp_to_uc003csj.1_5end |
EntrezGene: | CAMP |
HGNC: | 1472 |
UniProt: | P49913 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.03e-28 | 8 |
blood cell | 3.87e-20 | 11 |
myeloid leukocyte | 6.62e-14 | 72 |
basophil | 1.25e-11 | 3 |
neutrophil | 1.72e-11 | 3 |
leukocyte | 3.39e-10 | 136 |
myeloid cell | 1.08e-08 | 108 |
common myeloid progenitor | 1.08e-08 | 108 |
eosinophil | 1.38e-08 | 2 |
corneal epithelial cell | 6.77e-08 | 2 |
hematopoietic stem cell | 6.83e-08 | 168 |
defensive cell | 1.77e-07 | 48 |
phagocyte | 1.77e-07 | 48 |
hematopoietic cell | 3.44e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.33e-26 | 15 |
haemolymphatic fluid | 4.33e-26 | 15 |
organism substance | 4.33e-26 | 15 |
hematopoietic system | 1.15e-16 | 98 |
blood island | 1.15e-16 | 98 |
hemolymphoid system | 1.54e-14 | 108 |
adult organism | 3.91e-09 | 114 |
lateral plate mesoderm | 2.73e-08 | 203 |