FFCP PHASE1:Hg19::chr15:33023284..33023311,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:33023284..33023311,-
|short_description=p4@CU686887
|description=CAGE_peak_4_at_CU686887_5end
|association_with_transcript=133bp_to_CU686887_5end
|Entrez...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=133bp_to_CU686887_5end | |||
|cluster_id=chr15:33023284..33023311,- | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_4_at_CU686887_5end | |||
|id=chr15:33023284..33023311,- | |||
|ontology_enrichment_celltype=CL:0000055!6.64e-25!180;CL:0000057!7.18e-23!75;CL:0002620!1.24e-14!23;CL:0000048!1.09e-13!430;CL:0000723!4.57e-13!436;CL:0000034!1.04e-12!444;CL:0002334!2.41e-10!12;CL:0000680!9.88e-09!57;CL:0000056!9.88e-09!57;CL:0000355!9.88e-09!57;CL:0002320!3.14e-08!365;CL:0000192!3.76e-08!42;CL:0000514!3.76e-08!42;CL:0002371!7.05e-08!591;CL:0000134!1.24e-07!358;CL:0000187!5.40e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.59e-13;23!CL:0002334;7.15e-13;12!CL:0000135;2.66e-09;3!CL:0000388;2.66e-09;3!CL:0000057;3.62e-08;73!CL:0000197;1.08e-07;6!CL:0000098;1.08e-07;6!CL:0002167;1.08e-07;6!CL:0000136;5.30e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.91e-27,76;CL:0002620,3.27e-13,23;CL:0002334,7.82e-13,12;CL:0000048,1.37e-11,427;CL:0000723,3.24e-11,433;CL:0000034,9.79e-11,441;CL:0000136,4.05e-10,15;CL:0000135,2.68e-09,3;CL:0000388,2.68e-09,3;CL:0000134,1.66e-08,354;CL:0002320,4.20e-08,361;CL:0000197,8.66e-08,6;CL:0000098,8.66e-08,6;CL:0002167,8.66e-08,6;CL:0000219,2.86e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.62e-09!14;DOID:17!6.15e-07!5;DOID:450!6.15e-07!5;DOID:66!6.15e-07!5;DOID:423!6.15e-07!5;DOID:0080000!6.15e-07!5;DOID:11722!6.15e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.88e-13!83;UBERON:0002329!1.88e-13!83;UBERON:0003077!1.88e-13!83;UBERON:0003059!1.88e-13!83;UBERON:0007282!1.88e-13!83;UBERON:0009618!1.88e-13!83;UBERON:0007285!1.88e-13!83;UBERON:0002199!2.95e-12!45;UBERON:0002416!2.95e-12!45;UBERON:0003102!5.84e-11!95;UBERON:0002097!1.07e-10!40;UBERON:0004290!2.02e-10!70;UBERON:0000486!7.88e-10!82;UBERON:0001135!7.22e-09!15;UBERON:0002384!1.10e-08!375;UBERON:0005256!1.11e-08!143;UBERON:0002385!7.24e-08!63;UBERON:0001015!7.24e-08!63;UBERON:0000383!7.24e-08!63;UBERON:0001134!1.07e-07!61;UBERON:0002036!1.07e-07!61;UBERON:0003082!1.07e-07!61;UBERON:0004458!2.05e-07!49;UBERON:0000992!2.43e-07!13;UBERON:0002100!9.17e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.66e-09;3!UBERON:0000043;2.66e-09;3!UBERON:0007845;2.66e-09;3!UBERON:0002199;3.34e-09;46!UBERON:0002416;3.34e-09;46!UBERON:0002097;2.19e-08;41!UBERON:0003688;1.84e-07;6!UBERON:0002358;1.84e-07;6!UBERON:0003684;1.84e-07;6!UBERON:0001178;1.84e-07;6!UBERON:0003102;1.91e-07;50!UBERON:0004457;2.37e-07;9!UBERON:0000042;2.37e-07;9!UBERON:0005406;6.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.51e-13,46;UBERON:0002416,1.51e-13,46;UBERON:0002097,1.34e-10,41;UBERON:0007846,2.68e-09,3;UBERON:0000043,2.68e-09,3;UBERON:0007845,2.68e-09,3;UBERON:0003102,4.49e-09,99;UBERON:0002384,1.02e-08,371;UBERON:0003688,1.74e-07,6;UBERON:0002358,1.74e-07,6;UBERON:0003684,1.74e-07,6;UBERON:0001178,1.74e-07,6;UBERON:0005406,6.87e-07,2 | |||
|phase1_expression=2.18014055124668,1.71280419112787,0.704772020479856,5.00366491765652,2.23480547213644,6.97870819280295,2.53299878168311,0,0,0,0,0,0,0.495065411840187,0.994192127183747,7.39557661096953,1.80808358407193,2.19093027116212,3.90346239032406,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,0,0,1.94653948121054,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45457927542978,0,0.529636723252875,1.43418310374407,1.41867352879343,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0.23486899728753,0.485618833104395,0.421352420106746,0,0.122834317311768,0,3.56400857184616,4.20353779773547,0,0,0,0,0.277064115484183,4.82875382968922,7.96868269077451,4.6573798261045,0.113432183160021,2.33206526395521,1.06778694409284,0.847727604638247,3.90118424909723,0.412210116953756,2.06112432036503,1.11670113798954,1.85653965465393,1.36411807225678,1.7670364197088,1.47279837827679,0,2.4850671476163,1.0075209822764,2.03472710772585,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,11.5783368874719,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.797814349754612,4.16029747645464,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.410952645100767,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,5.17444067511769,7.254311091561,3.86566669475954,0,0,0,0.664225598535437,1.10621501125022,0.695068915744663,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,7.29716245525991,1.53766979106841,0,3.86049410744658,4.45254199334973,1.23367755042124,1.24293207719189,0.492762936082855,0,2.20799719073923,0,0,0,0,0.728364672026868,0.786746489756545,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42735719376638,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,1.88887408098384,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0,0.744316738719335,0.316379424718726,1.14378116354295,0,0,0,0,0.539617372749944,0.823611089208164,1.06031162111118,0,0,1.26377536871694,0.48763373908959,0.487426979262569,1.05650146756755,0.545999645631943,0.424216295861138,0,0,0,0,0,0,1.62328301570163,0,0,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7430910327651,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0.151230923763239,0.466311601748341,2.06997209985487,0.477890301491107,0,0.155262956876259,0.414706207840855,2.12673371646396,2.60872530905867,0.300515217994437,0,0.406870733204662,2.54588122883583,0.214821114084977,5.10437135866343,0.796191777397232,0,1.71697852591396,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7201740261367,0,0,3.87943538059752,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,7.13693881688831,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,4.83593523616777,4.62175628631418,3.02838593486652,0.252332849670158,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=2.18014055124668,1.71280419112787,0.704772020479856,5.00366491765652,2.23480547213644,6.97870819280295,2.53299878168311,0,0,0,0,0,0,0.495065411840187,0.994192127183747,7.39557661096953,1.80808358407193,2.19093027116212,3.90346239032406,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.00267582127178,0,0,1.94653948121054,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45457927542978,0,0.529636723252875,1.43418310374407,1.41867352879343,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0.23486899728753,0.485618833104395,0.421352420106746,0,0.122834317311768,0,3.56400857184616,4.20353779773547,0,0,0,0,0.277064115484183,4.82875382968922,7.96868269077451,4.6573798261045,0.113432183160021,2.33206526395521,1.06778694409284,0.847727604638247,3.90118424909723,0.412210116953756,2.06112432036503,1.11670113798954,1.85653965465393,1.36411807225678,1.7670364197088,1.47279837827679,0,2.4850671476163,1.0075209822764,2.03472710772585,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,11.5783368874719,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.797814349754612,4.16029747645464,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.410952645100767,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,5.17444067511769,7.254311091561,3.86566669475954,0,0,0,0.664225598535437,1.10621501125022,0.695068915744663,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,7.29716245525991,1.53766979106841,0,3.86049410744658,4.45254199334973,1.23367755042124,1.24293207719189,0.492762936082855,0,2.20799719073923,0,0,0,0,0.728364672026868,0.786746489756545,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42735719376638,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,1.88887408098384,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0,0.744316738719335,0.316379424718726,1.14378116354295,0,0,0,0,0.539617372749944,0.823611089208164,1.06031162111118,0,0,1.26377536871694,0.48763373908959,0.487426979262569,1.05650146756755,0.545999645631943,0.424216295861138,0,0,0,0,0,0,1.62328301570163,0,0,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7430910327651,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0.151230923763239,0.466311601748341,2.06997209985487,0.477890301491107,0,0.155262956876259,0.414706207840855,2.12673371646396,2.60872530905867,0.300515217994437,0,0.406870733204662,2.54588122883583,0.214821114084977,5.10437135866343,0.796191777397232,0,1.71697852591396,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7201740261367,0,0,3.87943538059752,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,7.13693881688831,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,4.83593523616777,4.62175628631418,3.02838593486652,0.252332849670158,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p4@CU686887 | |||
}} | }} |
Latest revision as of 00:48, 25 July 2015
Short description: | p4@CU686887 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU686887_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 133bp_to_CU686887_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.91e-27 | 76 |
skin fibroblast | 3.27e-13 | 23 |
preadipocyte | 7.82e-13 | 12 |
multi fate stem cell | 1.37e-11 | 427 |
somatic stem cell | 3.24e-11 | 433 |
stem cell | 9.79e-11 | 441 |
fat cell | 4.05e-10 | 15 |
fibrocyte | 2.68e-09 | 3 |
tendon cell | 2.68e-09 | 3 |
mesenchymal cell | 1.66e-08 | 354 |
connective tissue cell | 4.20e-08 | 361 |
receptor cell | 8.66e-08 | 6 |
sensory epithelial cell | 8.66e-08 | 6 |
olfactory epithelial cell | 8.66e-08 | 6 |
motile cell | 2.86e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
integument | 1.51e-13 | 46 |
integumental system | 1.51e-13 | 46 |
skin of body | 1.34e-10 | 41 |
dense regular connective tissue | 2.68e-09 | 3 |
tendon | 2.68e-09 | 3 |
regular connective tissue | 2.68e-09 | 3 |
surface structure | 4.49e-09 | 99 |
connective tissue | 1.02e-08 | 371 |
omentum | 1.74e-07 | 6 |
peritoneum | 1.74e-07 | 6 |
abdominal cavity | 1.74e-07 | 6 |
visceral peritoneum | 1.74e-07 | 6 |
perirenal fat | 6.87e-07 | 2 |