FFCP PHASE1:Hg19::chr3:52485849..52485879,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7134 | |EntrezGene=7134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11943 | |HGNC=11943 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=127bp_to_ENST00000461086_5end | |association_with_transcript=127bp_to_ENST00000461086_5end | ||
|cluster_id=chr3:52485849..52485879,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_TNNC1_5end | |description=CAGE_peak_4_at_TNNC1_5end | ||
|id=chr3:52485849..52485879,- | |id=chr3:52485849..52485879,- | ||
|ontology_enrichment_celltype=CL:0000188!3.01e-21!9 | |ontology_enrichment_celltype=CL:0000188!3.01e-21!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.28e-11;65!UBERON:0010226;4.86e-10;1!UBERON:0010227;5.54e-10;1!UBERON:0004874;1.01e-09;1!UBERON:0000358;1.25e-09;1!UBERON:0006298;1.99e-09;1!UBERON:0004140;1.99e-09;1!UBERON:0005062;2.41e-09;4!UBERON:0007284;2.41e-09;4 | |||
|ontology_enrichment_disease=DOID:114!3.27e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.45e-18;2!DOID:178;7.50e-10;1!DOID:326;7.50e-10;1!DOID:3978;7.50e-10;1!DOID:3394;7.50e-10;1!DOID:5844;7.50e-10;1!DOID:1287;1.49e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.45e-18,2;DOID:178,7.50e-10,1;DOID:326,7.50e-10,1;DOID:3978,7.50e-10,1;DOID:3394,7.50e-10,1;DOID:5844,7.50e-10,1;DOID:1287,1.49e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.10e-12!27;UBERON:0001630!2.50e-10!2;UBERON:0005090!2.50e-10!2;UBERON:0000341!7.90e-10!2;UBERON:0003103!2.30e-09!69;UBERON:0007023!4.10e-08!115;UBERON:0004151!4.33e-07!3;UBERON:0001723!5.98e-07!3;UBERON:0001033!5.98e-07!3;UBERON:0010056!5.98e-07!3;UBERON:0003978!6.52e-07!3;UBERON:0009751!6.52e-07!3;UBERON:0000946!6.52e-07!3;UBERON:0002523!6.52e-07!3;UBERON:0005983!6.52e-07!3;UBERON:0002165!6.52e-07!3;UBERON:0002062!6.52e-07!3;UBERON:0007280!6.52e-07!3 | |ontology_enrichment_uberon=UBERON:0007100!8.10e-12!27;UBERON:0001630!2.50e-10!2;UBERON:0005090!2.50e-10!2;UBERON:0000341!7.90e-10!2;UBERON:0003103!2.30e-09!69;UBERON:0007023!4.10e-08!115;UBERON:0004151!4.33e-07!3;UBERON:0001723!5.98e-07!3;UBERON:0001033!5.98e-07!3;UBERON:0010056!5.98e-07!3;UBERON:0003978!6.52e-07!3;UBERON:0009751!6.52e-07!3;UBERON:0000946!6.52e-07!3;UBERON:0002523!6.52e-07!3;UBERON:0005983!6.52e-07!3;UBERON:0002165!6.52e-07!3;UBERON:0002062!6.52e-07!3;UBERON:0007280!6.52e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.31e-20;25!UBERON:0005090;2.15e-18;2!UBERON:0001630;2.15e-18;2!UBERON:0004151;1.66e-12;3!UBERON:0001723;3.37e-12;3!UBERON:0001033;3.37e-12;3!UBERON:0003978;3.67e-12;3!UBERON:0000946;3.67e-12;3!UBERON:0001389;3.74e-10;1!UBERON:0000026;3.74e-10;1!UBERON:0008784;3.74e-10;1!UBERON:0006058;3.74e-10;1!UBERON:0003663;3.74e-10;1!UBERON:0004256;3.74e-10;1!UBERON:0004708;3.74e-10;1!UBERON:0002101;3.74e-10;1!UBERON:0004709;3.74e-10;1!UBERON:0002529;3.74e-10;1!UBERON:0010538;3.74e-10;1!UBERON:0003661;3.74e-10;1!UBERON:0010890;3.74e-10;1!UBERON:0002471;3.74e-10;1!UBERON:0001383;3.74e-10;1!UBERON:0010758;3.74e-10;1!UBERON:0010707;3.74e-10;1!UBERON:0000978;3.74e-10;1!UBERON:0002103;3.74e-10;1!UBERON:0001665;3.74e-10;1!UBERON:0003823;3.74e-10;1!UBERON:0000154;3.74e-10;1!UBERON:0010709;3.74e-10;1!UBERON:0002084;4.86e-10;1!UBERON:0002082;4.86e-10;1!UBERON:0002079;5.54e-10;1!UBERON:0002426;5.54e-10;1!UBERON:0003831;5.54e-10;1!UBERON:0003898;5.54e-10;1!UBERON:0004830;5.54e-10;1!UBERON:0003830;5.54e-10;1!UBERON:0005175;5.54e-10;1!UBERON:0001774;5.54e-10;1!UBERON:0001103;5.54e-10;1!UBERON:0002135;8.90e-10;1!UBERON:0000989;1.01e-09;1!UBERON:0002146;1.01e-09;1!UBERON:0008811;1.01e-09;1!UBERON:0005623;1.01e-09;1!UBERON:0000948;1.92e-09;22!UBERON:0001736;1.99e-09;1!UBERON:0001301;1.99e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.71e-19,27;UBERON:0005090,2.06e-18,2;UBERON:0001630,2.06e-18,2;UBERON:0007023,5.80e-14,114;UBERON:0003103,4.14e-13,68;UBERON:0004151,1.71e-12,3;UBERON:0001723,3.19e-12,3;UBERON:0001033,3.19e-12,3;UBERON:0010056,3.19e-12,3;UBERON:0003978,3.77e-12,3;UBERON:0009751,3.77e-12,3;UBERON:0000946,3.77e-12,3;UBERON:0002523,3.77e-12,3;UBERON:0005983,3.77e-12,3;UBERON:0002165,3.77e-12,3;UBERON:0002062,3.77e-12,3;UBERON:0007280,3.77e-12,3;UBERON:0005418,3.74e-10,1;UBERON:0001389,3.74e-10,1;UBERON:0000026,3.74e-10,1;UBERON:0008784,3.74e-10,1;UBERON:0006058,3.74e-10,1;UBERON:0003663,3.74e-10,1;UBERON:0004256,3.74e-10,1;UBERON:0004708,3.74e-10,1;UBERON:0002101,3.74e-10,1;UBERON:0004709,3.74e-10,1;UBERON:0002529,3.74e-10,1;UBERON:0010538,3.74e-10,1;UBERON:0003661,3.74e-10,1;UBERON:0010890,3.74e-10,1;UBERON:0002471,3.74e-10,1;UBERON:0001383,3.74e-10,1;UBERON:0004357,3.74e-10,1;UBERON:0004347,3.74e-10,1;UBERON:0005420,3.74e-10,1;UBERON:0005732,3.74e-10,1;UBERON:0010758,3.74e-10,1;UBERON:0010707,3.74e-10,1;UBERON:0000978,3.74e-10,1;UBERON:0002103,3.74e-10,1;UBERON:0001665,3.74e-10,1;UBERON:0003823,3.74e-10,1;UBERON:0000154,3.74e-10,1;UBERON:0010709,3.74e-10,1;UBERON:0005733,3.74e-10,1;UBERON:0005730,3.74e-10,1;UBERON:0002084,4.87e-10,1;UBERON:0002082,4.87e-10,1;UBERON:0010226,4.87e-10,1;UBERON:0002426,5.31e-10,1;UBERON:0003831,5.31e-10,1;UBERON:0003898,5.31e-10,1;UBERON:0004830,5.31e-10,1;UBERON:0003830,5.31e-10,1;UBERON:0005175,5.31e-10,1;UBERON:0001774,5.31e-10,1;UBERON:0001103,5.31e-10,1;UBERON:0010084,5.31e-10,1;UBERON:0002079,5.79e-10,1;UBERON:0002135,8.91e-10,1;UBERON:0000989,9.70e-10,1;UBERON:0008811,9.70e-10,1;UBERON:0006258,9.70e-10,1;UBERON:0005876,9.70e-10,1;UBERON:0004874,9.70e-10,1;UBERON:0002146,1.06e-09,1;UBERON:0005623,1.06e-09,1;UBERON:0001736,1.91e-09,1;UBERON:0006298,1.91e-09,1;UBERON:0001301,2.46e-09,1;UBERON:0000948,1.27e-08,24;UBERON:0005498,1.27e-08,24;UBERON:0004140,1.27e-08,24;UBERON:0009881,1.27e-08,24;UBERON:0004141,1.27e-08,24;UBERON:0003084,1.27e-08,24;UBERON:0007005,1.27e-08,24;UBERON:0004139,1.27e-08,24;UBERON:0004291,1.27e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.827019434907183,0,0.290033387828457,0.255679882248303,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,2.2562765983567,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,4.18923601908381,3.66656678418694,0,5.39133301347276,12.4475553959606,5.13294352116307,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14695326373367,9.26928758511604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,3.96968942711435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1857209296974,5.95444279766233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8602088235638,0.476128862927481,0,0,0.112131862580613,0,1.41482032270754,6.96693593270276,2.39563310759697,0,0,0.99798106963804,0,0,0,0,2.34640942403454,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.827019434907183,0,0.290033387828457,0.255679882248303,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,2.2562765983567,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,4.18923601908381,3.66656678418694,0,5.39133301347276,12.4475553959606,5.13294352116307,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14695326373367,9.26928758511604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,3.96968942711435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1857209296974,5.95444279766233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8602088235638,0.476128862927481,0,0,0.112131862580613,0,1.41482032270754,6.96693593270276,2.39563310759697,0,0,0.99798106963804,0,0,0,0,2.34640942403454,0,0,0,1.00636896795513,0 | ||
|short_description=p4@TNNC1 | |short_description=p4@TNNC1 | ||
}} | }} |
Latest revision as of 23:53, 18 September 2015
Short description: | p4@TNNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNNC1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 127bp_to_ENST00000461086_5end |
EntrezGene: | TNNC1 |
HGNC: | 11943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.45e-18 | 2 |
vascular disease | 7.50e-10 | 1 |
ischemia | 7.50e-10 | 1 |
extrinsic cardiomyopathy | 7.50e-10 | 1 |
myocardial ischemia | 7.50e-10 | 1 |
myocardial infarction | 7.50e-10 | 1 |
cardiovascular system disease | 1.49e-09 | 4 |