FFCP PHASE1:Hg19::chr15:37391588..37391604,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:37391588..37391604,-
|short_description=p11@MEIS2
|description=CAGE_peak_11_at_MEIS2_5end
|association_with_transcript=0bp_to_ENST00000397620,ENST00000557...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4212 | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |HGNC=7001 | ||
|TSSclassifier=strong | |||
|UniProt=B3KPQ6 | |UniProt=B3KPQ6 | ||
|association_with_transcript=0bp_to_ENST00000397620,ENST00000557796,NM_172316,uc001zjm.2_5end | |||
|cluster_id=chr15:37391588..37391604,- | |||
|description=CAGE_peak_11_at_MEIS2_5end | |||
|id=chr15:37391588..37391604,- | |||
|ontology_enrichment_celltype=CL:0000055!2.59e-16!180;CL:0000057!6.40e-10!75;CL:0002620!9.67e-09!23;CL:0000183!9.92e-08!59;CL:0000187!2.58e-07!54;CL:0000220!3.42e-07!246;CL:0000222!3.51e-07!119;CL:0000680!4.43e-07!57;CL:0000056!4.43e-07!57;CL:0000355!4.43e-07!57;CL:0002321!8.11e-07!248;CL:0000393!9.81e-07!60;CL:0000211!9.81e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.12e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.05e-10,76;CL:0000222,6.89e-09,121;CL:0002620,9.24e-09,23;CL:0000187,6.19e-08,55;CL:0000393,1.25e-07,61;CL:0000211,1.25e-07,61;CL:0000680,4.11e-07,58;CL:0000056,4.11e-07,58;CL:0000355,4.11e-07,58;CL:0000192,8.05e-07,43;CL:0000514,8.05e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.62e-07;5!DOID:450;8.62e-07;5!DOID:66;8.62e-07;5!DOID:423;8.62e-07;5!DOID:0080000;8.62e-07;5!DOID:11722;8.62e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.20e-07,5;DOID:450,8.20e-07,5;DOID:66,8.20e-07,5;DOID:423,8.20e-07,5;DOID:0080000,8.20e-07,5;DOID:11722,8.20e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.19e-15!365;UBERON:0000468!4.32e-14!659;UBERON:0000467!1.25e-12!625;UBERON:0000480!1.26e-12!626;UBERON:0000481!9.23e-12!347;UBERON:0000483!6.57e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002100!3.89e-08!216;UBERON:0003104!6.49e-08!238;UBERON:0009142!6.49e-08!238;UBERON:0000062!6.98e-08!511;UBERON:0004111!1.03e-07!241;UBERON:0000922!1.49e-07!612;UBERON:0005256!1.77e-07!143;UBERON:0002050!1.93e-07!605;UBERON:0005423!1.93e-07!605;UBERON:0000923!3.61e-07!604;UBERON:0005291!3.61e-07!604;UBERON:0006598!3.61e-07!604;UBERON:0002532!3.61e-07!604;UBERON:0005156!6.11e-07!59;UBERON:0000990!6.11e-07!59;UBERON:0002385!8.89e-07!63;UBERON:0001015!8.89e-07!63;UBERON:0000383!8.89e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;6.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.20e-08,78;UBERON:0002385,3.78e-07,64;UBERON:0001015,3.78e-07,64;UBERON:0000383,3.78e-07,64;UBERON:0001135,4.06e-07,15;UBERON:0001134,7.16e-07,62;UBERON:0002036,7.16e-07,62;UBERON:0003082,7.16e-07,62;UBERON:0003104,7.80e-07,160;UBERON:0009142,7.80e-07,160;UBERON:0005256,8.87e-07,122 | |||
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| ||
|short_description=p11@MEIS2 | |||
}} | }} |
Latest revision as of 08:27, 17 September 2015
Short description: | p11@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MEIS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397620, ENST00000557796, NM_172316, uc001zjm.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | B3KPQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.05e-10 | 76 |
mesodermal cell | 6.89e-09 | 121 |
skin fibroblast | 9.24e-09 | 23 |
muscle cell | 6.19e-08 | 55 |
electrically responsive cell | 1.25e-07 | 61 |
electrically active cell | 1.25e-07 | 61 |
muscle precursor cell | 4.11e-07 | 58 |
myoblast | 4.11e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.11e-07 | 58 |
smooth muscle cell | 8.05e-07 | 43 |
smooth muscle myoblast | 8.05e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.20e-08 | 78 |
muscle tissue | 3.78e-07 | 64 |
musculature | 3.78e-07 | 64 |
musculature of body | 3.78e-07 | 64 |
smooth muscle tissue | 4.06e-07 | 15 |
skeletal muscle tissue | 7.16e-07 | 62 |
striated muscle tissue | 7.16e-07 | 62 |
myotome | 7.16e-07 | 62 |
mesenchyme | 7.80e-07 | 160 |
entire embryonic mesenchyme | 7.80e-07 | 160 |
trunk mesenchyme | 8.87e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.20e-07 | 5 |
myotonic disease | 8.20e-07 | 5 |
muscle tissue disease | 8.20e-07 | 5 |
myopathy | 8.20e-07 | 5 |
muscular disease | 8.20e-07 | 5 |
myotonic dystrophy | 8.20e-07 | 5 |