FFCP PHASE1:Hg19::chr4:152148984..152149004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152503 | |EntrezGene=152503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30418 | |HGNC=30418 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000514013_5end | |association_with_transcript=64bp_to_ENST00000514013_5end | ||
|cluster_id=chr4:152148984..152149004,- | |||
|coexpression_cluster_id=C2779 | |||
|description=CAGE_peak_4_at_SH3D19_5end | |description=CAGE_peak_4_at_SH3D19_5end | ||
|id=chr4:152148984..152149004,- | |id=chr4:152148984..152149004,- | ||
|ontology_enrichment_celltype=CL:0000136!7.71e-12!15;CL:0002139!2.68e-11!24;CL:0000115!2.73e-09!35;CL:0000057!1.20e-08!75;CL:0002334!2.07e-08!12;CL:0000222!3.06e-08!119;CL:0002078!5.33e-08!44;CL:0000071!5.35e-08!18;CL:0002546!5.35e-08!18;CL:1000413!4.24e-07!9 | |ontology_enrichment_celltype=CL:0000136!7.71e-12!15;CL:0002139!2.68e-11!24;CL:0000115!2.73e-09!35;CL:0000057!1.20e-08!75;CL:0002334!2.07e-08!12;CL:0000222!3.06e-08!119;CL:0002078!5.33e-08!44;CL:0000071!5.35e-08!18;CL:0002546!5.35e-08!18;CL:1000413!4.24e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.62e-23;13!CL:0002139;1.17e-11;24!CL:0000134;1.39e-09;55!CL:0000071;6.20e-09;18!CL:0000723;1.12e-08;61!CL:0000048;1.27e-08;58!CL:1000413;2.38e-08;9!CL:0002334;2.73e-08;12!CL:0000115;1.04e-07;36!CL:0002544;3.53e-07;6!CL:0002615;4.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.14e-22,15;CL:0002139,1.14e-11,24;CL:0000071,7.81e-09,18;CL:0002546,7.81e-09,18;CL:0000115,1.04e-08,36;CL:0002334,2.94e-08,12;CL:0002078,3.14e-08,45;CL:1000413,4.03e-08,9;CL:0000213,5.42e-08,58;CL:0000215,5.42e-08,58;CL:0002544,3.94e-07,6;CL:0002615,4.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;6.20e-09;18 | |||
|ontology_enrichment_disease=DOID:2394!1.72e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.86e-12!84;UBERON:0000055!2.19e-11!69;UBERON:0001009!8.76e-11!113;UBERON:0002049!2.08e-10!79;UBERON:0007798!2.08e-10!79;UBERON:0000468!2.77e-10!659;UBERON:0004535!4.89e-10!110;UBERON:0001981!6.97e-10!60;UBERON:0007500!6.97e-10!60;UBERON:0004537!6.97e-10!60;UBERON:0006965!6.97e-10!60;UBERON:0003914!5.43e-09!118;UBERON:0004111!6.59e-09!241;UBERON:0000477!4.38e-08!286;UBERON:0001986!5.35e-08!18;UBERON:0004638!5.35e-08!18;UBERON:0004852!5.35e-08!18;UBERON:0000467!6.02e-08!625;UBERON:0007100!7.16e-08!27;UBERON:0000480!7.73e-08!626;UBERON:0000914!7.76e-08!83;UBERON:0002329!7.76e-08!83;UBERON:0003077!7.76e-08!83;UBERON:0003059!7.76e-08!83;UBERON:0007282!7.76e-08!83;UBERON:0009618!7.76e-08!83;UBERON:0007285!7.76e-08!83;UBERON:0000486!3.56e-07!82;UBERON:0000475!3.66e-07!365;UBERON:0003915!4.24e-07!9;UBERON:0004700!4.24e-07!9;UBERON:0001917!4.24e-07!9;UBERON:0000948!5.45e-07!24;UBERON:0005498!5.45e-07!24;UBERON:0004140!5.45e-07!24;UBERON:0009881!5.45e-07!24;UBERON:0004141!5.45e-07!24;UBERON:0003084!5.45e-07!24;UBERON:0007005!5.45e-07!24;UBERON:0004139!5.45e-07!24;UBERON:0004291!5.45e-07!24;UBERON:0000483!6.90e-07!309 | |ontology_enrichment_uberon=UBERON:0004872!3.86e-12!84;UBERON:0000055!2.19e-11!69;UBERON:0001009!8.76e-11!113;UBERON:0002049!2.08e-10!79;UBERON:0007798!2.08e-10!79;UBERON:0000468!2.77e-10!659;UBERON:0004535!4.89e-10!110;UBERON:0001981!6.97e-10!60;UBERON:0007500!6.97e-10!60;UBERON:0004537!6.97e-10!60;UBERON:0006965!6.97e-10!60;UBERON:0003914!5.43e-09!118;UBERON:0004111!6.59e-09!241;UBERON:0000477!4.38e-08!286;UBERON:0001986!5.35e-08!18;UBERON:0004638!5.35e-08!18;UBERON:0004852!5.35e-08!18;UBERON:0000467!6.02e-08!625;UBERON:0007100!7.16e-08!27;UBERON:0000480!7.73e-08!626;UBERON:0000914!7.76e-08!83;UBERON:0002329!7.76e-08!83;UBERON:0003077!7.76e-08!83;UBERON:0003059!7.76e-08!83;UBERON:0007282!7.76e-08!83;UBERON:0009618!7.76e-08!83;UBERON:0007285!7.76e-08!83;UBERON:0000486!3.56e-07!82;UBERON:0000475!3.66e-07!365;UBERON:0003915!4.24e-07!9;UBERON:0004700!4.24e-07!9;UBERON:0001917!4.24e-07!9;UBERON:0000948!5.45e-07!24;UBERON:0005498!5.45e-07!24;UBERON:0004140!5.45e-07!24;UBERON:0009881!5.45e-07!24;UBERON:0004141!5.45e-07!24;UBERON:0003084!5.45e-07!24;UBERON:0007005!5.45e-07!24;UBERON:0004139!5.45e-07!24;UBERON:0004291!5.45e-07!24;UBERON:0000483!6.90e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.37e-13;9!UBERON:0000042;9.37e-13;9!UBERON:0003688;1.48e-11;6!UBERON:0002358;1.48e-11;6!UBERON:0003684;1.48e-11;6!UBERON:0001178;1.48e-11;6!UBERON:0001013;1.57e-10;14!UBERON:0004638;6.20e-09;18!UBERON:0001986;6.20e-09;18!UBERON:0004852;6.20e-09;18!UBERON:0006914;1.90e-08;25!UBERON:0003915;2.38e-08;9!UBERON:0004700;2.38e-08;9!UBERON:0001917;2.38e-08;9!UBERON:0000487;7.26e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.15e-11,6;UBERON:0002358,1.15e-11,6;UBERON:0003684,1.15e-11,6;UBERON:0001178,1.15e-11,6;UBERON:0001013,1.84e-10,14;UBERON:0004457,3.44e-09,12;UBERON:0000042,3.44e-09,12;UBERON:0004638,7.81e-09,18;UBERON:0001986,7.81e-09,18;UBERON:0004852,7.81e-09,18;UBERON:0006914,2.25e-08,25;UBERON:0003915,4.03e-08,9;UBERON:0004700,4.03e-08,9;UBERON:0001917,4.03e-08,9;UBERON:0004535,1.56e-07,109;UBERON:0002049,2.18e-07,78;UBERON:0007798,2.18e-07,78;UBERON:0004872,2.50e-07,83;UBERON:0001009,4.00e-07,112;UBERON:0000487,8.68e-07,22;UBERON:0000055,8.74e-07,68 | |||
|phase1_expression=13.8075568245623,5.99481466894753,19.733616573436,5.00366491765652,12.9618717383913,3.48935409640147,2.53299878168311,1.26343974685366,1.30592814099919,0,0.697801167972428,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.511450247374121,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,3.18019851786728,1.72046919021225,2.42998351125316,2.26123176769604,0.838998872419812,1.10047216776027,1.25396979922086,1.55050055501597,0.71153252537342,1.67360306382335,0.805658634218294,0,0.976248230192678,1.10298924103761,0.81014194788176,3.21479021822687,1.57170560838319,1.68917220724983,0,0,1.28241220751285,0,0,0.436094052142534,0,0.506522046658319,1.98613771219828,0.573673241497627,0,0.560677600142307,0,0,2.17847724779836,0.942974704487816,0,3.02714855289863,2.88087962239999,0,0.936480230490962,1.1409436430889,0.149448680551801,0.23486899728753,0.323745888736263,0,0.408308342509787,0.245668634623536,1.03325781175765,0,0.494533858557114,0,0,0.673344455816265,0.625592599359821,0.831192346452549,0.438977620880838,0,0.600952235626387,0.113432183160021,0.179389635688862,0.427114777637135,0,0.600182192168805,0.206105058476878,0.257640540045629,0,0.675105328965065,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0.57978255948989,0.818238361772504,1.72082757233402,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,6.50115099244771,6.49691533502627,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0,0.548751427043128,0,0,0.185176890317059,0,0,0,0,0.352226082707465,1.73239737313289,0.925971025153221,1.14152491340759,0,0,0,0,0,0.93733833986777,2.35174979478403,1.84307626415102,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,2.06834745212444,3.57656445851882,0,0,1.04007436911366,0,0,0,5.43316375900961,1.62786481617433,0,0,3.909311436168,0,2.71295439353627,2.61460037580088,1.79951384127703,0,0,0,0,0,0,1.15825045334063,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,0,0,0.315404830067869,0.117141414992713,1.50473049863859,4.5481500811197,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,6.94701861892575,1.38115775959256,2.24528075546459,6.79137491055215,2.55853624533352,1.60853921143608,2.96836132889982,0.154209693802656,0.710246901252508,0.9033987161519,1.03850885836724,0.348631135379878,0,1.00253235151642,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,1.14853107599234,0,0,0,0.154048617114644,0,0,1.50388342815583,0.145016693914229,0.170453254832202,0.178064071293475,0.495854746082934,0.192190067365106,2.04180339991335,0,0.464845549297286,0.31481234683064,0,1.54016790088044,0,0,1.29726953372744,0.715624433709956,0,0,1.14378116354295,0,0.42793898803392,0,0,1.07923474549989,1.09814811894422,0.471249609382746,0.404364963146632,0,0.421258456238981,0.48763373908959,2.68084838594413,0,0,2.2624869112594,0,0,0.66343897524122,3.94605796728386,0,0,0,0.30982349809975,0,0.143411352204052,0.982490410131212,0,0.709522128141196,2.11107635297664,2.96365403663912,0,0,0,0,0,1.60044461320525,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79049075631364,0,0,0,3.34242278632766,0,3.99308912729002,0.994147647766298,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,1.1837208676432,0,2.22273980289274,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,3.19001159731919,0.732780747214898,2.66517388009317,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,1.32686346755009,0,0,0,0,0.404406797884062,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,1.64881328030313,0,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.837847203816763,2.97908551215189,0.717873024576814,0.399358000997982,0.429226048136571,0.669514372325618,0.53746777989381,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,1.98627591109629,0,1.62899880526114,0,0.653174720218818,0,0,0.340776043570843,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,2.88326013932776,0.943225830597996,1.65695622138878,0.496166021811951,0,0,0,8.16026705054211,12.534494701135,16.2363155684635,18.0329946890392,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0.895528817321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| ||
|short_description=p4@SH3D19 | |short_description=p4@SH3D19 | ||
}} | }} |
Latest revision as of 02:36, 16 September 2015
Short description: | p4@SH3D19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SH3D19_5end |
Coexpression cluster: | C2779_Adipocyte_mature_adipose_Preadipocyte_Fibroblast_Mesenchymal_Hair |
Association with transcript: | 64bp_to_ENST00000514013_5end |
EntrezGene: | SH3D19 |
HGNC: | 30418 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.14e-22 | 15 |
endothelial cell of vascular tree | 1.14e-11 | 24 |
blood vessel endothelial cell | 7.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.81e-09 | 18 |
endothelial cell | 1.04e-08 | 36 |
preadipocyte | 2.94e-08 | 12 |
meso-epithelial cell | 3.14e-08 | 45 |
endothelial cell of artery | 4.03e-08 | 9 |
lining cell | 5.42e-08 | 58 |
barrier cell | 5.42e-08 | 58 |
aortic endothelial cell | 3.94e-07 | 6 |
adipocyte of omentum tissue | 4.22e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.15e-11 | 6 |
peritoneum | 1.15e-11 | 6 |
abdominal cavity | 1.15e-11 | 6 |
visceral peritoneum | 1.15e-11 | 6 |
adipose tissue | 1.84e-10 | 14 |
cavity lining | 3.44e-09 | 12 |
serous membrane | 3.44e-09 | 12 |
blood vessel endothelium | 7.81e-09 | 18 |
endothelium | 7.81e-09 | 18 |
cardiovascular system endothelium | 7.81e-09 | 18 |
squamous epithelium | 2.25e-08 | 25 |
endothelial tube | 4.03e-08 | 9 |
arterial system endothelium | 4.03e-08 | 9 |
endothelium of artery | 4.03e-08 | 9 |
cardiovascular system | 1.56e-07 | 109 |
vasculature | 2.18e-07 | 78 |
vascular system | 2.18e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 2.50e-07 | 83 |
circulatory system | 4.00e-07 | 112 |
simple squamous epithelium | 8.68e-07 | 22 |
vessel | 8.74e-07 | 68 |