FFCP PHASE1:Hg19::chr15:39885323..39885396,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39885323..39885396,+
|short_description=p16@THBS1
|description=CAGE_peak_16_at_THBS1_5end
|association_with_transcript=77bp_to_ENST00000484734_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=77bp_to_ENST00000484734_5end | |||
|cluster_id=chr15:39885323..39885396,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_16_at_THBS1_5end | |||
|id=chr15:39885323..39885396,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.45e-19!591;CL:0000055!1.59e-17!180;CL:0000057!3.61e-16!75;CL:0000144!7.99e-16!625;CL:0000548!7.86e-14!679;CL:0000004!7.86e-14!679;CL:0000255!7.86e-14!679;CL:0000222!1.64e-13!119;CL:0000012!3.36e-13!682;CL:0000115!2.57e-12!35;CL:0002139!6.24e-12!24;CL:0000220!4.48e-11!246;CL:0002078!5.19e-11!44;CL:0002321!8.27e-11!248;CL:0000071!9.33e-09!18;CL:0002546!9.33e-09!18;CL:0000213!1.73e-08!57;CL:0000215!1.73e-08!57;CL:0000063!2.03e-08!578;CL:0000723!1.22e-07!436;CL:0002334!2.75e-07!12;CL:0000048!2.91e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.91e-14;24!CL:0000115;1.26e-11;36!CL:0000071;9.46e-10;18!CL:0002334;8.54e-09;12!CL:0002078;1.33e-07;45!CL:0002620;4.74e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.80e-17,76;CL:0002139,2.83e-14,24;CL:0000115,1.12e-13,36;CL:0002078,8.38e-11,45;CL:0000222,6.45e-10,121;CL:0000071,8.07e-10,18;CL:0002546,8.07e-10,18;CL:0000723,4.59e-09,433;CL:0002334,7.82e-09,12;CL:0000048,2.25e-08,427;CL:0000213,2.63e-08,58;CL:0000215,2.63e-08,58;CL:0000034,3.00e-08,441;CL:0002321,2.67e-07,250;CL:0002620,5.04e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002546;9.46e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.27e-17!69;UBERON:0002049!2.12e-16!79;UBERON:0007798!2.12e-16!79;UBERON:0004872!2.74e-15!84;UBERON:0001981!4.82e-15!60;UBERON:0007500!4.82e-15!60;UBERON:0004537!4.82e-15!60;UBERON:0006965!4.82e-15!60;UBERON:0001009!2.65e-13!113;UBERON:0004535!4.99e-13!110;UBERON:0001637!6.99e-12!42;UBERON:0003509!6.99e-12!42;UBERON:0004572!6.99e-12!42;UBERON:0003914!1.02e-11!118;UBERON:0000468!1.54e-11!659;UBERON:0000480!6.19e-11!626;UBERON:0000467!7.86e-11!625;UBERON:0000490!2.59e-09!138;UBERON:0000487!9.16e-09!22;UBERON:0001986!9.33e-09!18;UBERON:0004638!9.33e-09!18;UBERON:0004852!9.33e-09!18;UBERON:0004573!2.32e-08!33;UBERON:0004571!2.32e-08!33;UBERON:0003102!3.26e-08!95;UBERON:0006914!3.91e-08!25;UBERON:0000926!1.36e-07!448;UBERON:0004120!1.36e-07!448;UBERON:0006603!1.36e-07!448;UBERON:0003081!2.20e-07!216;UBERON:0002199!6.80e-07!45;UBERON:0002416!6.80e-07!45;UBERON:0000914!7.97e-07!83;UBERON:0002329!7.97e-07!83;UBERON:0003077!7.97e-07!83;UBERON:0003059!7.97e-07!83;UBERON:0007282!7.97e-07!83;UBERON:0009618!7.97e-07!83;UBERON:0007285!7.97e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.46e-10;18!UBERON:0001986;9.46e-10;18!UBERON:0004852;9.46e-10;18!UBERON:0000487;1.82e-09;22!UBERON:0001637;2.34e-09;42!UBERON:0003509;2.34e-09;42!UBERON:0004572;2.34e-09;42!UBERON:0007500;8.89e-09;56!UBERON:0001981;8.89e-09;56!UBERON:0004537;8.89e-09;56!UBERON:0000055;1.13e-08;65!UBERON:0005631;6.10e-08;10!UBERON:0000158;6.10e-08;10!UBERON:0006914;1.14e-07;25!UBERON:0003688;1.35e-07;6!UBERON:0002358;1.35e-07;6!UBERON:0003684;1.35e-07;6!UBERON:0001178;1.35e-07;6!UBERON:0002097;3.06e-07;41!UBERON:0002199;3.91e-07;46!UBERON:0002416;3.91e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.55e-16,68;UBERON:0002049,2.27e-13,78;UBERON:0007798,2.27e-13,78;UBERON:0007500,8.05e-13,59;UBERON:0001981,8.05e-13,59;UBERON:0004537,8.05e-13,59;UBERON:0006965,8.05e-13,59;UBERON:0004872,2.06e-12,83;UBERON:0001637,1.87e-11,42;UBERON:0003509,1.87e-11,42;UBERON:0004572,1.87e-11,42;UBERON:0002199,2.11e-10,46;UBERON:0002416,2.11e-10,46;UBERON:0004535,5.71e-10,109;UBERON:0003102,7.08e-10,99;UBERON:0004638,8.07e-10,18;UBERON:0001986,8.07e-10,18;UBERON:0004852,8.07e-10,18;UBERON:0001009,9.41e-10,112;UBERON:0000487,1.69e-09,22;UBERON:0002097,3.05e-09,41;UBERON:0003914,2.08e-08,117;UBERON:0006914,1.07e-07,25;UBERON:0003688,1.35e-07,6;UBERON:0002358,1.35e-07,6;UBERON:0003684,1.35e-07,6;UBERON:0001178,1.35e-07,6;UBERON:0005631,1.59e-07,14;UBERON:0000158,1.59e-07,14;UBERON:0004871,1.74e-07,8;UBERON:0004573,5.61e-07,33;UBERON:0004571,5.61e-07,33;UBERON:0004923,7.71e-07,66 | |||
|phase1_expression=21.4380487539257,34.2560838225573,11.9811243481575,39.0285863577209,10.2801051718276,29.6595098194125,2.53299878168311,1.26343974685366,0.522371256399677,2.21160542851358,2.09340350391728,2.83973783769224,6.33040747748289,0.495065411840187,0,6.05092631806598,4.21886169616784,10.2243412654232,5.85519358548608,0.123121058076788,0.204000691244253,0,0.572471974262113,0.273748850145768,0.753255837568817,0,0,0,0.393364276848904,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,1.66198622559563,3.20871115952227,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,1.16318591023652,0,0,4.18372266430232,0,0.309706370895104,5.75384784644301,0.256160706529101,0.47296445977717,4.82643953031266,0.645484683583826,0,5.08254316765033,0.545812300115692,0,7.03992952453076,1.28371610830437,0,1.31940520074686,0.199463657621632,0.426224750532694,15.381089647315,0.56738522469114,0.622822248995575,6.28121663141858,0,0.434377689410233,4.84319602106695,0.736555271975129,0.316462387440884,0,0,0,0.22465726229299,1.80212271409808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,0.722878304769133,4.51204119572301,2.31754430337318,1.5905718941022,6.8128881842369,0.378139268656271,0.221729397462564,0.263504357079378,0.130979075497713,1.45718115317017,0.370784442784429,0,0,0,0,0,0,4.17401055470081,0.860234595106124,2.42998351125316,5.08777147731609,3.35599548967925,8.52865930014209,8.98678356108286,3.10100111003195,3.20189636418039,6.35969164252873,2.81980521976403,5.32190474002959,5.85748938115607,4.77962004449629,7.29127753093584,3.66128885964727,1.34717623575702,2.70267553159973,1.53316637465883,0.949265659568129,7.32806975721629,0,0,2.18047026071267,20.8728219712034,7.59783069987479,5.29636723252875,2.29469296599051,0.354668382198357,3.92474320099615,10.6748995729705,8.14002909776628,0.933633106199299,0.404132016209064,2.61539044981534,0.605429710579726,1.15235184896,0.234321431833797,0,0,0.298897361103602,0,0,0,1.02077085627447,0.737005903870608,1.34323515528495,4.75201142912821,17.5559519787775,1.82032272387605,0,0.673344455816265,0.250237039743928,0.277064115484183,2.63386572528503,16.8568287689461,7.96261712204963,2.38207584636044,12.7366641339092,12.5998859402955,13.1397778718928,6.30191301777245,3.40073346486848,7.21393512127762,7.81690796592677,10.9704615956823,4.48210223741514,5.80597680761463,10.1254888506529,4.0411514204703,8.52023022039874,3.42557133973977,5.76506013855658,1.35282597214308,3.81844568827169,0.860413786167011,0.121973706129595,0,0,0,0,0,9.38697193978896,18.6539872075937,12.4321429217232,8.8229906326076,5.77503585335668,0.354920400119532,0.842923450390509,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,1.86575485194663,2.24803506515239,1.80952150340936,1.85176890317059,0,1.03993478527958,2.88662684050547,0.231860809950154,0.117408694235822,6.92958949253154,12.0376233269919,15.4105863310025,2.37061319387782,0,0,0,0,1.87467667973554,6.2153387433578,2.69372684760534,2.86587272649115,1.16253575405585,4.98397482914775,0,0,0,0,0,0.126995788584338,0,0,0,0.925447434329912,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.904902010304444,0,0,3.72313363218819,7.28052058379563,0.771622122786426,1.41849132023278,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0,0,0,0,5.5113716763064,2.29723871668228,0,2.17171960001369,1.84928690295345,1.79060963239896,0,0,0,0.128343036279748,0,0,2.31986643833309,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,13.9340477225641,33.3662209050692,11.8276811275451,8.66846470946078,1.80567659836631,4.5481500811197,1.03473071292505,1.32845119707087,1.65932251687533,4.60483156680839,0.195801157462741,0.343143423810856,0.413536052245775,0,0.426910231213777,0,6.65741758041988,2.72151263996712,21.3372714724148,40.2070370014724,46.8702357703233,8.45718385087626,22.515118958935,34.2618852035884,10.3892646511494,3.23840356985577,1.9531789784444,0.574890092096664,1.03850885836724,1.74315567689939,0.120859449591622,7.01772646061497,0.184161977871793,1.95184561879831,0.728364672026868,1.44236856455367,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,2.55140557914773,2.37507507712353,15.4227252690289,0.270946437543853,0,0.509752546090077,1.66215201785745,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0.574265537996172,8.45078319847478,6.42735719376638,0.193341436584244,0.308097234229289,0.460511024178389,0.275673144969061,0.429680979473094,0.870100163485371,0.596586391912706,0.534192213880424,2.31398881505369,3.2672311452068,6.76347376221296,0.708104465988849,0,5.98143458978216,0,0.616067160352178,0.532306030317022,0.869932992075073,1.8532421910392,0.429374660225974,0,1.89827654831236,0.190630193923825,0.255897791311334,0,0,1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|phase1_expression=21.4380487539257,34.2560838225573,11.9811243481575,39.0285863577209,10.2801051718276,29.6595098194125,2.53299878168311,1.26343974685366,0.522371256399677,2.21160542851358,2.09340350391728,2.83973783769224,6.33040747748289,0.495065411840187,0,6.05092631806598,4.21886169616784,10.2243412654232,5.85519358548608,0.123121058076788,0.204000691244253,0,0.572471974262113,0.273748850145768,0.753255837568817,0,0,0,0.393364276848904,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,1.66198622559563,3.20871115952227,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,1.16318591023652,0,0,4.18372266430232,0,0.309706370895104,5.75384784644301,0.256160706529101,0.47296445977717,4.82643953031266,0.645484683583826,0,5.08254316765033,0.545812300115692,0,7.03992952453076,1.28371610830437,0,1.31940520074686,0.199463657621632,0.426224750532694,15.381089647315,0.56738522469114,0.622822248995575,6.28121663141858,0,0.434377689410233,4.84319602106695,0.736555271975129,0.316462387440884,0,0,0,0.22465726229299,1.80212271409808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,0.722878304769133,4.51204119572301,2.31754430337318,1.5905718941022,6.8128881842369,0.378139268656271,0.221729397462564,0.263504357079378,0.130979075497713,1.45718115317017,0.370784442784429,0,0,0,0,0,0,4.17401055470081,0.860234595106124,2.42998351125316,5.08777147731609,3.35599548967925,8.52865930014209,8.98678356108286,3.10100111003195,3.20189636418039,6.35969164252873,2.81980521976403,5.32190474002959,5.85748938115607,4.77962004449629,7.29127753093584,3.66128885964727,1.34717623575702,2.70267553159973,1.53316637465883,0.949265659568129,7.32806975721629,0,0,2.18047026071267,20.8728219712034,7.59783069987479,5.29636723252875,2.29469296599051,0.354668382198357,3.92474320099615,10.6748995729705,8.14002909776628,0.933633106199299,0.404132016209064,2.61539044981534,0.605429710579726,1.15235184896,0.234321431833797,0,0,0.298897361103602,0,0,0,1.02077085627447,0.737005903870608,1.34323515528495,4.75201142912821,17.5559519787775,1.82032272387605,0,0.673344455816265,0.250237039743928,0.277064115484183,2.63386572528503,16.8568287689461,7.96261712204963,2.38207584636044,12.7366641339092,12.5998859402955,13.1397778718928,6.30191301777245,3.40073346486848,7.21393512127762,7.81690796592677,10.9704615956823,4.48210223741514,5.80597680761463,10.1254888506529,4.0411514204703,8.52023022039874,3.42557133973977,5.76506013855658,1.35282597214308,3.81844568827169,0.860413786167011,0.121973706129595,0,0,0,0,0,9.38697193978896,18.6539872075937,12.4321429217232,8.8229906326076,5.77503585335668,0.354920400119532,0.842923450390509,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,1.86575485194663,2.24803506515239,1.80952150340936,1.85176890317059,0,1.03993478527958,2.88662684050547,0.231860809950154,0.117408694235822,6.92958949253154,12.0376233269919,15.4105863310025,2.37061319387782,0,0,0,0,1.87467667973554,6.2153387433578,2.69372684760534,2.86587272649115,1.16253575405585,4.98397482914775,0,0,0,0,0,0.126995788584338,0,0,0,0.925447434329912,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.904902010304444,0,0,3.72313363218819,7.28052058379563,0.771622122786426,1.41849132023278,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0,0,0,0,5.5113716763064,2.29723871668228,0,2.17171960001369,1.84928690295345,1.79060963239896,0,0,0,0.128343036279748,0,0,2.31986643833309,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0,0,13.9340477225641,33.3662209050692,11.8276811275451,8.66846470946078,1.80567659836631,4.5481500811197,1.03473071292505,1.32845119707087,1.65932251687533,4.60483156680839,0.195801157462741,0.343143423810856,0.413536052245775,0,0.426910231213777,0,6.65741758041988,2.72151263996712,21.3372714724148,40.2070370014724,46.8702357703233,8.45718385087626,22.515118958935,34.2618852035884,10.3892646511494,3.23840356985577,1.9531789784444,0.574890092096664,1.03850885836724,1.74315567689939,0.120859449591622,7.01772646061497,0.184161977871793,1.95184561879831,0.728364672026868,1.44236856455367,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,2.55140557914773,2.37507507712353,15.4227252690289,0.270946437543853,0,0.509752546090077,1.66215201785745,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0.574265537996172,8.45078319847478,6.42735719376638,0.193341436584244,0.308097234229289,0.460511024178389,0.275673144969061,0.429680979473094,0.870100163485371,0.596586391912706,0.534192213880424,2.31398881505369,3.2672311452068,6.76347376221296,0.708104465988849,0,5.98143458978216,0,0.616067160352178,0.532306030317022,0.869932992075073,1.8532421910392,0.429374660225974,0,1.89827654831236,0.190630193923825,0.255897791311334,0,0,1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| ||
|short_description=p16@THBS1 | |||
}} | }} |
Latest revision as of 11:21, 17 September 2015
Short description: | p16@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 77bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.80e-17 | 76 |
endothelial cell of vascular tree | 2.83e-14 | 24 |
endothelial cell | 1.12e-13 | 36 |
meso-epithelial cell | 8.38e-11 | 45 |
mesodermal cell | 6.45e-10 | 121 |
blood vessel endothelial cell | 8.07e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.07e-10 | 18 |
somatic stem cell | 4.59e-09 | 433 |
preadipocyte | 7.82e-09 | 12 |
multi fate stem cell | 2.25e-08 | 427 |
lining cell | 2.63e-08 | 58 |
barrier cell | 2.63e-08 | 58 |
stem cell | 3.00e-08 | 441 |
embryonic cell | 2.67e-07 | 250 |
skin fibroblast | 5.04e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
vessel | 5.55e-16 | 68 |
vasculature | 2.27e-13 | 78 |
vascular system | 2.27e-13 | 78 |
epithelial tube open at both ends | 8.05e-13 | 59 |
blood vessel | 8.05e-13 | 59 |
blood vasculature | 8.05e-13 | 59 |
vascular cord | 8.05e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 2.06e-12 | 83 |
artery | 1.87e-11 | 42 |
arterial blood vessel | 1.87e-11 | 42 |
arterial system | 1.87e-11 | 42 |
integument | 2.11e-10 | 46 |
integumental system | 2.11e-10 | 46 |
cardiovascular system | 5.71e-10 | 109 |
surface structure | 7.08e-10 | 99 |
blood vessel endothelium | 8.07e-10 | 18 |
endothelium | 8.07e-10 | 18 |
cardiovascular system endothelium | 8.07e-10 | 18 |
circulatory system | 9.41e-10 | 112 |
simple squamous epithelium | 1.69e-09 | 22 |
skin of body | 3.05e-09 | 41 |
epithelial tube | 2.08e-08 | 117 |
squamous epithelium | 1.07e-07 | 25 |
omentum | 1.35e-07 | 6 |
peritoneum | 1.35e-07 | 6 |
abdominal cavity | 1.35e-07 | 6 |
visceral peritoneum | 1.35e-07 | 6 |
extraembryonic membrane | 1.59e-07 | 14 |
membranous layer | 1.59e-07 | 14 |
somatic layer of lateral plate mesoderm | 1.74e-07 | 8 |
systemic artery | 5.61e-07 | 33 |
systemic arterial system | 5.61e-07 | 33 |
organ component layer | 7.71e-07 | 66 |