FFCP PHASE1:Hg19::chr4:24202276..24202277,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:24202276..24202277,- | |||
|coexpression_cluster_id=C449 | |||
|description=CAGE_peak_at_chr4:24202276..24202277,- | |description=CAGE_peak_at_chr4:24202276..24202277,- | ||
|id=chr4:24202276..24202277,- | |id=chr4:24202276..24202277,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.04e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.72e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000997;7.48e-30;1!UBERON:0005056;7.48e-30;1!UBERON:0004176;7.48e-30;1!UBERON:0001874;2.37e-29;1!UBERON:0002771;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0001052;2.26e-08;4!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0003528;2.10e-07;34!UBERON:0002020;2.10e-07;34!UBERON:0002021;5.08e-07;5!UBERON:0004907;6.04e-07;5 | |||
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|short_description=p@chr4:24202276..24202277,- | |short_description=p@chr4:24202276..24202277,- | ||
}} | }} |
Latest revision as of 04:28, 30 July 2015
Short description: | p@chr4:24202276..24202277, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:24202276..24202277, - |
Coexpression cluster: | C449_epidermoid_anaplastic_occipital_oral_middle_Wilms_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 7.48e-30 | 1 |
external female genitalia | 7.48e-30 | 1 |
putamen | 4.20e-29 | 1 |
middle temporal gyrus | 2.05e-15 | 2 |
caudate-putamen | 1.20e-10 | 3 |
dorsal striatum | 1.20e-10 | 3 |
regional part of nervous system | 7.58e-09 | 53 |
regional part of brain | 7.58e-09 | 53 |
regional part of telencephalon | 2.06e-08 | 32 |
cerebral hemisphere | 2.06e-08 | 32 |
neural tube | 2.10e-08 | 56 |
neural rod | 2.10e-08 | 56 |
future spinal cord | 2.10e-08 | 56 |
neural keel | 2.10e-08 | 56 |
rectum | 2.11e-08 | 4 |
corpus striatum | 2.61e-08 | 4 |
striatum | 2.61e-08 | 4 |
ventral part of telencephalon | 2.61e-08 | 4 |
future corpus striatum | 2.61e-08 | 4 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
telencephalon | 5.73e-08 | 34 |
occipital lobe | 5.08e-07 | 5 |
lower digestive tract | 5.70e-07 | 5 |
brain | 6.43e-07 | 68 |
future brain | 6.43e-07 | 68 |
regional part of forebrain | 9.61e-07 | 41 |
forebrain | 9.61e-07 | 41 |
anterior neural tube | 9.61e-07 | 41 |
future forebrain | 9.61e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.72e-09 | 14 |