FFCP PHASE1:Hg19::chr4:86525299..86525314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHH1 | |UniProt=D6RHH1 | ||
|association_with_transcript=0bp_to_ENST00000512201_5end | |association_with_transcript=0bp_to_ENST00000512201_5end | ||
|cluster_id=chr4:86525299..86525314,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_27_at_ARHGAP24_5end | |description=CAGE_peak_27_at_ARHGAP24_5end | ||
|id=chr4:86525299..86525314,+ | |id=chr4:86525299..86525314,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.76e-09!24;CL:0000826!6.76e-09!24;CL:0000236!2.38e-08!14;CL:0000842!9.63e-07!3 | |ontology_enrichment_celltype=CL:0000945!6.76e-09!24;CL:0000826!6.76e-09!24;CL:0000236!2.38e-08!14;CL:0000842!9.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000785;6.62e-41;1!CL:0000819;6.62e-41;1!CL:0000945;1.19e-15;24!CL:0002144;1.83e-14;3!CL:0000236;3.03e-13;13!CL:0000542;1.91e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,6.62e-41,1;CL:0000785,3.11e-21,2;CL:0000955,3.11e-21,2;CL:0000818,3.11e-21,2;CL:0000954,3.11e-21,2;CL:0000816,3.11e-21,2;CL:0000945,1.19e-15,24;CL:0000826,1.19e-15,24;CL:0000817,1.22e-14,3;CL:0002144,1.83e-14,3;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53;CL:0000236,2.37e-12,14;CL:0000838,1.18e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000954;3.11e-21;2!CL:0000051;1.91e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;6.62e-41;1!DOID:8675;6.62e-41;1!DOID:12603;9.91e-41;1!DOID:0060058;6.93e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.62e-41,1;DOID:8675,6.62e-41,1;DOID:12603,9.91e-41,1;DOID:0060058,6.39e-17,10;DOID:2531,8.01e-08,51;DOID:0060083,8.01e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.34e-15!115;UBERON:0000988!4.47e-14!3;UBERON:0003076!3.54e-10!15;UBERON:0003057!3.54e-10!15;UBERON:0002148!7.97e-10!2;UBERON:0009662!7.97e-10!2;UBERON:0002298!5.61e-09!8;UBERON:0002308!2.23e-08!9;UBERON:0000125!2.23e-08!9;UBERON:0002106!4.30e-07!3;UBERON:0002240!4.30e-07!3;UBERON:0004854!4.30e-07!3;UBERON:0009034!4.30e-07!3;UBERON:0002095!4.30e-07!3;UBERON:0004782!4.30e-07!3;UBERON:0003281!4.30e-07!3;UBERON:0009664!4.30e-07!3;UBERON:0002296!4.30e-07!3;UBERON:0005602!4.30e-07!3;UBERON:0001179!4.30e-07!3;UBERON:0006293!4.30e-07!3;UBERON:0006331!8.07e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.34e-15!115;UBERON:0000988!4.47e-14!3;UBERON:0003076!3.54e-10!15;UBERON:0003057!3.54e-10!15;UBERON:0002148!7.97e-10!2;UBERON:0009662!7.97e-10!2;UBERON:0002298!5.61e-09!8;UBERON:0002308!2.23e-08!9;UBERON:0000125!2.23e-08!9;UBERON:0002106!4.30e-07!3;UBERON:0002240!4.30e-07!3;UBERON:0004854!4.30e-07!3;UBERON:0009034!4.30e-07!3;UBERON:0002095!4.30e-07!3;UBERON:0004782!4.30e-07!3;UBERON:0003281!4.30e-07!3;UBERON:0009664!4.30e-07!3;UBERON:0002296!4.30e-07!3;UBERON:0005602!4.30e-07!3;UBERON:0001179!4.30e-07!3;UBERON:0006293!4.30e-07!3;UBERON:0006331!8.07e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.83e-14;3!UBERON:0001915;1.83e-14;3!UBERON:0001982;1.83e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.83e-14,3;UBERON:0001915,1.83e-14,3;UBERON:0001982,1.83e-14,3 | |||
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| ||
|short_description=p27@ARHGAP24 | |short_description=p27@ARHGAP24 | ||
}} | }} |
Latest revision as of 03:28, 19 September 2015
Short description: | p27@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ARHGAP24_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 0bp_to_ENST00000512201_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | D6RHH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 6.62e-41 | 1 |
mature B cell | 3.11e-21 | 2 |
pre-B-II cell | 3.11e-21 | 2 |
transitional stage B cell | 3.11e-21 | 2 |
small pre-B-II cell | 3.11e-21 | 2 |
immature B cell | 3.11e-21 | 2 |
lymphocyte of B lineage | 1.19e-15 | 24 |
pro-B cell | 1.19e-15 | 24 |
precursor B cell | 1.22e-14 | 3 |
capillary endothelial cell | 1.83e-14 | 3 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
B cell | 2.37e-12 | 14 |
lymphoid lineage restricted progenitor cell | 1.18e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.83e-14 | 3 |
endothelium of capillary | 1.83e-14 | 3 |
capillary | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.62e-41 | 1 |
lymphosarcoma | 6.62e-41 | 1 |
acute leukemia | 9.91e-41 | 1 |
lymphoma | 6.39e-17 | 10 |
hematologic cancer | 8.01e-08 | 51 |
immune system cancer | 8.01e-08 | 51 |