FFCP PHASE1:Hg19::chr5:112538977..112538988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4163 | |EntrezGene=4163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6935 | |HGNC=6935 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000506605_5end | |association_with_transcript=25bp_to_ENST00000506605_5end | ||
|cluster_id=chr5:112538977..112538988,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_14_at_MCC_5end | |description=CAGE_peak_14_at_MCC_5end | ||
|id=chr5:112538977..112538988,- | |id=chr5:112538977..112538988,- | ||
|ontology_enrichment_celltype=CL:0000147!1.82e-17!14;CL:0000148!8.08e-14!10;CL:0000541!8.08e-14!10;CL:0000333!1.37e-12!41;CL:0000223!6.36e-09!59;CL:0000133!1.56e-08!59;CL:0000243!1.78e-07!15;CL:0000125!1.78e-07!15;CL:0000030!1.78e-07!15;CL:0000339!1.78e-07!15;CL:0000221!3.95e-07!71;CL:0000066!4.10e-07!254 | |ontology_enrichment_celltype=CL:0000147!1.82e-17!14;CL:0000148!8.08e-14!10;CL:0000541!8.08e-14!10;CL:0000333!1.37e-12!41;CL:0000223!6.36e-09!59;CL:0000133!1.56e-08!59;CL:0000243!1.78e-07!15;CL:0000125!1.78e-07!15;CL:0000030!1.78e-07!15;CL:0000339!1.78e-07!15;CL:0000221!3.95e-07!71;CL:0000066!4.10e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.65e-15;10!CL:0000147;2.92e-11;14!CL:0000710;4.68e-08;20!CL:0002567;7.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.65e-15,10;CL:0000541,1.65e-15,10;CL:0000147,2.92e-11,14;CL:0000333,9.57e-10,41;CL:0000710,4.68e-08,20;CL:0000133,7.28e-07,59;CL:0002567,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.22e-17;1!UBERON:0006238;4.43e-07;10!UBERON:0003056;6.50e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!8.17e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.15e-07!5;UBERON:0005388!2.15e-07!5;UBERON:0001802!2.15e-07!5;UBERON:0003729!4.62e-07!5 | |ontology_enrichment_uberon=UBERON:0000966!2.15e-07!5;UBERON:0005388!2.15e-07!5;UBERON:0001802!2.15e-07!5;UBERON:0003729!4.62e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.38e-34;2!UBERON:0002757;2.38e-34;2!UBERON:0010134;2.38e-34;2!UBERON:0005408;2.38e-34;2!UBERON:0001899;2.38e-34;2!UBERON:0003296;9.92e-18;4!UBERON:0010133;9.92e-18;4!UBERON:0002784;9.92e-18;4!UBERON:0001894;1.50e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.18e-34,2;UBERON:0002757,2.18e-34,2;UBERON:0010134,2.18e-34,2;UBERON:0005408,2.18e-34,2;UBERON:0001899,2.18e-34,2;UBERON:0003296,9.51e-18,4;UBERON:0010133,9.51e-18,4;UBERON:0002784,9.51e-18,4;UBERON:0001894,1.46e-10,7;UBERON:0006222,1.46e-10,7 | |||
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| ||
|short_description=p14@MCC | |short_description=p14@MCC | ||
}} | }} |
Latest revision as of 18:42, 19 September 2015
Short description: | p14@MCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MCC_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 25bp_to_ENST00000506605_5end |
EntrezGene: | MCC |
HGNC: | 6935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.65e-15 | 10 |
melanoblast | 1.65e-15 | 10 |
pigment cell | 2.92e-11 | 14 |
migratory neural crest cell | 9.57e-10 | 41 |
neurecto-epithelial cell | 4.68e-08 | 20 |
neurectodermal cell | 7.28e-07 | 59 |
light melanocyte | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.18e-34 | 2 |
regional part of epithalamus | 2.18e-34 | 2 |
secretory circumventricular organ | 2.18e-34 | 2 |
circumventricular organ | 2.18e-34 | 2 |
epithalamus | 2.18e-34 | 2 |
gland of diencephalon | 9.51e-18 | 4 |
neuroendocrine gland | 9.51e-18 | 4 |
regional part of diencephalon | 9.51e-18 | 4 |
diencephalon | 1.46e-10 | 7 |
future diencephalon | 1.46e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.03e-09 | 2 |