FFCP PHASE1:Hg19::chr5:138725012..138725016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:138725012..138725016,- | |||
|coexpression_cluster_id=C2805 | |||
|description=CAGE_peak_at_chr5:138725012..138725016,- | |description=CAGE_peak_at_chr5:138725012..138725016,- | ||
|id=chr5:138725012..138725016,- | |id=chr5:138725012..138725016,- | ||
|ontology_enrichment_celltype=CL:0000945!4.36e-25!24;CL:0000826!4.36e-25!24;CL:0000542!1.29e-24!53;CL:0000051!1.29e-24!53;CL:0000838!1.82e-22!52;CL:0000236!5.28e-17!14;CL:0000817!3.00e-12!3;CL:0000738!4.65e-09!140;CL:0000785!1.05e-08!2;CL:0000955!1.05e-08!2;CL:0000818!1.05e-08!2;CL:0000954!1.05e-08!2;CL:0000816!1.05e-08!2;CL:0002087!3.73e-08!119;CL:0000037!3.46e-07!172;CL:0000566!3.46e-07!172 | |ontology_enrichment_celltype=CL:0000945!4.36e-25!24;CL:0000826!4.36e-25!24;CL:0000542!1.29e-24!53;CL:0000051!1.29e-24!53;CL:0000838!1.82e-22!52;CL:0000236!5.28e-17!14;CL:0000817!3.00e-12!3;CL:0000738!4.65e-09!140;CL:0000785!1.05e-08!2;CL:0000955!1.05e-08!2;CL:0000818!1.05e-08!2;CL:0000954!1.05e-08!2;CL:0000816!1.05e-08!2;CL:0002087!3.73e-08!119;CL:0000037!3.46e-07!172;CL:0000566!3.46e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000784;5.74e-23;3!CL:0000945;2.38e-11;24!CL:0000542;6.95e-11;53!CL:0000451;5.98e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.12e-22,3;CL:0000945,1.92e-11,24;CL:0000826,1.92e-11,24;CL:0000542,3.92e-11,53;CL:0000051,3.92e-11,53;CL:0000738,4.34e-09,136;CL:0000838,4.38e-08,52;CL:0000037,3.26e-07,168;CL:0000451,7.15e-07,10;CL:0000988,8.32e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.95e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.12e-13!10;DOID:2531!5.02e-10!51;DOID:0060083!5.02e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;7.36e-18;1!DOID:0060058;1.47e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.22e-17,1;DOID:0060058,1.47e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.17e-13!7;UBERON:0003408!1.94e-09!10;UBERON:0002370!2.56e-09!4;UBERON:0005058!2.56e-09!4;UBERON:0009113!2.56e-09!4;UBERON:0003295!2.56e-09!4;UBERON:0005562!2.56e-09!4;UBERON:0000974!2.99e-09!10 | |ontology_enrichment_uberon=UBERON:0004177!2.17e-13!7;UBERON:0003408!1.94e-09!10;UBERON:0002370!2.56e-09!4;UBERON:0005058!2.56e-09!4;UBERON:0009113!2.56e-09!4;UBERON:0003295!2.56e-09!4;UBERON:0005562!2.56e-09!4;UBERON:0000974!2.99e-09!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;7.36e-18;1!UBERON:0001961;7.36e-18;1!UBERON:0001744;7.36e-18;1!UBERON:0001042;7.36e-18;1!UBERON:0001735;7.36e-18;1!UBERON:0002370;1.33e-09;2!UBERON:0006562;1.33e-09;2!UBERON:0005058;1.33e-09;2!UBERON:0009113;1.33e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.70e-17,1;UBERON:0001961,1.70e-17,1;UBERON:0001744,1.70e-17,1;UBERON:0001735,1.70e-17,1;UBERON:0001042,1.47e-07,10;UBERON:0009145,1.47e-07,10;UBERON:0006562,5.98e-07,11 | |||
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| ||
|short_description=p@chr5:138725012..138725016,- | |short_description=p@chr5:138725012..138725016,- | ||
}} | }} |
Latest revision as of 10:22, 30 July 2015
Short description: | p@chr5:138725012..138725016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:138725012..138725016, - |
Coexpression cluster: | C2805_Hodgkin_chronic_thymus_b_Burkitt_plasma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.12e-22 | 3 |
lymphocyte of B lineage | 1.92e-11 | 24 |
pro-B cell | 1.92e-11 | 24 |
lymphocyte | 3.92e-11 | 53 |
common lymphoid progenitor | 3.92e-11 | 53 |
leukocyte | 4.34e-09 | 136 |
lymphoid lineage restricted progenitor cell | 4.38e-08 | 52 |
hematopoietic stem cell | 3.26e-07 | 168 |
dendritic cell | 7.15e-07 | 10 |
hematopoietic cell | 8.32e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.70e-17 | 1 |
mucosa-associated lymphoid tissue | 1.70e-17 | 1 |
lymphoid tissue | 1.70e-17 | 1 |
tonsillar ring | 1.70e-17 | 1 |
chordate pharynx | 1.47e-07 | 10 |
pharyngeal region of foregut | 1.47e-07 | 10 |
pharynx | 5.98e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.22e-17 | 1 |
lymphoma | 1.47e-07 | 10 |