FFCP PHASE1:Hg19::chr15:48623317..48623356,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:48623317..48623356,+
|short_description=p3@DUT
|description=CAGE_peak_3_at_DUT_5end
|association_with_transcript=25bp_to_ENST00000559416_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1854 | |EntrezGene=1854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3078 | |HGNC=3078 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000559416_5end | |||
|cluster_id=chr15:48623317..48623356,+ | |||
|description=CAGE_peak_3_at_DUT_5end | |||
|id=chr15:48623317..48623356,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.61e-11!52;CL:0000037!4.73e-11!172;CL:0000566!4.73e-11!172;CL:0000542!5.60e-11!53;CL:0000051!5.60e-11!53;CL:0000988!2.47e-10!182;CL:0002032!6.26e-10!165;CL:0000837!6.26e-10!165;CL:0000084!1.41e-09!25;CL:0000827!1.41e-09!25;CL:0000791!2.61e-09!18;CL:0000789!2.61e-09!18;CL:0002420!2.61e-09!18;CL:0002419!2.61e-09!18;CL:0000790!2.61e-09!18;CL:0002087!5.74e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.32e-11;18!CL:0000789;4.32e-11;18!CL:0002419;4.32e-11;18!CL:0000084;1.36e-10;25!CL:0000625;2.19e-07;11!CL:0000542;3.29e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.10e-11,18;CL:0000789,3.10e-11,18;CL:0002420,3.10e-11,18;CL:0002419,3.10e-11,18;CL:0000790,3.10e-11,18;CL:0000838,9.03e-11,52;CL:0000084,9.55e-11,25;CL:0000827,9.55e-11,25;CL:0000542,2.69e-10,53;CL:0000051,2.69e-10,53;CL:0000037,1.69e-09,168;CL:0000988,9.40e-09,177;CL:0002032,2.27e-08,161;CL:0000837,2.27e-08,161;CL:0000625,1.51e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.32e-11;18!CL:0000051;3.29e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!3.04e-08!39;DOID:2531!6.17e-08!51;DOID:0060083!6.17e-08!51;DOID:8692!3.45e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.77e-08;31!DOID:1240;3.55e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.00e-09,39;DOID:2531,1.26e-08,51;DOID:0060083,1.26e-08,51;DOID:8692,1.27e-08,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@DUT | |||
}} | }} |
Latest revision as of 21:49, 17 September 2015
Short description: | p3@DUT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DUT_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000559416_5end |
EntrezGene: | DUT |
HGNC: | 3078 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.10e-11 | 18 |
alpha-beta T cell | 3.10e-11 | 18 |
immature T cell | 3.10e-11 | 18 |
mature T cell | 3.10e-11 | 18 |
immature alpha-beta T cell | 3.10e-11 | 18 |
lymphoid lineage restricted progenitor cell | 9.03e-11 | 52 |
T cell | 9.55e-11 | 25 |
pro-T cell | 9.55e-11 | 25 |
lymphocyte | 2.69e-10 | 53 |
common lymphoid progenitor | 2.69e-10 | 53 |
hematopoietic stem cell | 1.69e-09 | 168 |
hematopoietic cell | 9.40e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.27e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.27e-08 | 161 |
CD8-positive, alpha-beta T cell | 1.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.00e-09 | 39 |
hematologic cancer | 1.26e-08 | 51 |
immune system cancer | 1.26e-08 | 51 |
myeloid leukemia | 1.27e-08 | 31 |