FFCP PHASE1:Hg19::chr5:175612149..175612227,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000510850,ENST00000512260,ENST00000515403_5end | |association_with_transcript=0bp_to_ENST00000510850,ENST00000512260,ENST00000515403_5end | ||
|cluster_id=chr5:175612149..175612227,- | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_1_at_ENST00000510850_5end,CAGE_peak_1_at_ENST00000512260_5end,CAGE_peak_1_at_ENST00000515403_5end | |description=CAGE_peak_1_at_ENST00000510850_5end,CAGE_peak_1_at_ENST00000512260_5end,CAGE_peak_1_at_ENST00000515403_5end | ||
|id=chr5:175612149..175612227,- | |id=chr5:175612149..175612227,- | ||
|ontology_enrichment_celltype=CL:0000057!5.47e-11!75;CL:0000055!1.15e-08!180;CL:0002556!1.45e-07!6;CL:0002552!7.60e-07!5 | |ontology_enrichment_celltype=CL:0000057!5.47e-11!75;CL:0000055!1.15e-08!180;CL:0002556!1.45e-07!6;CL:0002552!7.60e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002552;1.02e-10;5!CL:0002363;2.09e-07;2!CL:0002367;2.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.03e-10,5;CL:0000057,3.50e-09,76;CL:0002367,2.09e-07,2;CL:0002363,2.16e-07,2;CL:0000008,2.16e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.09e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!6.84e-09!239;DOID:2531!8.53e-09!51;DOID:0060083!8.53e-09!51;DOID:162!1.15e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.13e-15;8!DOID:2531;5.92e-11;51!DOID:0060083;5.92e-11;51!DOID:1240;2.30e-10;39!DOID:8692;4.71e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.14e-17,51;DOID:0060083,4.14e-17,51;DOID:1036,5.33e-15,8;DOID:1240,5.99e-12,39;DOID:8692,4.49e-09,31;DOID:0050686,5.24e-09,137;DOID:162,3.99e-07,235;DOID:14566,7.97e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001758!1.45e-07!6;UBERON:0003672!1.45e-07!6 | |ontology_enrichment_uberon=UBERON:0001758!1.45e-07!6;UBERON:0003672!1.45e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001444;1.68e-07;48!UBERON:0003566;2.09e-07;2!UBERON:0001777;2.09e-07;2!UBERON:0005969;2.75e-07;2!UBERON:0003956;2.75e-07;2!UBERON:0000007;3.92e-07;2!UBERON:0000033;9.49e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001444,3.09e-08,49;UBERON:0005969,2.09e-07,2;UBERON:0003956,2.09e-07,2;UBERON:0003566,2.16e-07,2;UBERON:0001777,2.16e-07,2;UBERON:0000007,4.52e-07,2;UBERON:0000153,5.03e-07,62;UBERON:0007811,5.03e-07,62;UBERON:0000033,7.23e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.46480320348181,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,20.3672462398943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,2.10889288650417,2.18512053781224,1.71141546463335,0.448346041655403,1.40921398372518,0.485618833104395,0,3.47062091133319,7.61572767332961,2.06651562351531,2.37600571456411,0.247266929278557,0,0,8.58514181165738,4.12891115577482,5.81834642516784,0.877955241761676,0.612975591598039,0.150238058906597,0,1.25572744982203,0,0,0.900273288253207,0,0,0.18611685633159,1.18143432568886,0.876933046450788,0,0,0,0.355009592516614,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0,0,1.3032332212413,6.23960871167747,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.621984346622316,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,5.19276793395697,3.6988097517864,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,1.99267679560631,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.492762936082855,0,0.116210378459959,0,0,0,0,0,0,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0.154048617114644,0.460511024178389,1.10269257987624,0.537101224341368,0.580066775656914,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89736586882858,4.54915136318478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.7051769746595,0.318852545457645,0,0,0,0,0,0,1.72347885350326,0,0,0,0.201799707191048,0,0,0,0,0,40.0545595574183,0,0,0.811367035427949,0,33.8368812210839,0.561421621224659,0,0,239.714719580856,0,0,0,0,0,0,0.445234820091624,7.25137046597742,0.211125408127993,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8581951691074,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,16.1225331443152,4.73750887296079,5.48975096089671,4.02771808742022,4.17458211993207,32.2641255330169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0.970722711091971,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.274083849293502,0.794858446811959,0.0633107959558787,0,0.64127056201227,0,0,0,0.114536596165916,0,0.14405479798815,2.23654564017779,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0.873385142327441,0,0,0,0,0,0,4.48768659948658,0,0,0.160753148465019,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,72.651880863165,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0.400027764663154,0.343395705182793,0,0,8.47527253792135,0,0,0,1.62065732026684,0.489473409012935,0.71635536432595,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,1.63804924423206,0.491545817507439,0,0,0,46.3258295287594,0,5.8913904080589,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,1.27078232765372,3.4324388592045,0,0,0.0752103283492573,6.0511520611056,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,0,0,2.81393990975393,0,0,0,1.21393120847326,2.27662191351298,0.177404740325278,0,0.685952037749674,0.0679697329768317,0,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0,2.05417695252545,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,4.61306097991642,0,0,0,0,0,0,37.0048441800145,0,0,0.109940516745429,49.5158126898689,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0.101988829741982,0,0,0,18.7173384599051,66.4551042787323,0,0,0,0.714193294391221,0,0,2.80329656451534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.46480320348181,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,20.3672462398943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,2.10889288650417,2.18512053781224,1.71141546463335,0.448346041655403,1.40921398372518,0.485618833104395,0,3.47062091133319,7.61572767332961,2.06651562351531,2.37600571456411,0.247266929278557,0,0,8.58514181165738,4.12891115577482,5.81834642516784,0.877955241761676,0.612975591598039,0.150238058906597,0,1.25572744982203,0,0,0.900273288253207,0,0,0.18611685633159,1.18143432568886,0.876933046450788,0,0,0,0.355009592516614,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0,0,1.3032332212413,6.23960871167747,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.621984346622316,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,5.19276793395697,3.6988097517864,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,1.99267679560631,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.492762936082855,0,0.116210378459959,0,0,0,0,0,0,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0.154048617114644,0.460511024178389,1.10269257987624,0.537101224341368,0.580066775656914,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89736586882858,4.54915136318478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.7051769746595,0.318852545457645,0,0,0,0,0,0,1.72347885350326,0,0,0,0.201799707191048,0,0,0,0,0,40.0545595574183,0,0,0.811367035427949,0,33.8368812210839,0.561421621224659,0,0,239.714719580856,0,0,0,0,0,0,0.445234820091624,7.25137046597742,0.211125408127993,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8581951691074,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,16.1225331443152,4.73750887296079,5.48975096089671,4.02771808742022,4.17458211993207,32.2641255330169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0.970722711091971,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0,0.274083849293502,0.794858446811959,0.0633107959558787,0,0.64127056201227,0,0,0,0.114536596165916,0,0.14405479798815,2.23654564017779,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0.873385142327441,0,0,0,0,0,0,4.48768659948658,0,0,0.160753148465019,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,72.651880863165,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0.400027764663154,0.343395705182793,0,0,8.47527253792135,0,0,0,1.62065732026684,0.489473409012935,0.71635536432595,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,1.63804924423206,0.491545817507439,0,0,0,46.3258295287594,0,5.8913904080589,0,0,0,0,0,0.109209638192014,0,0,0,0,0.954013051960256,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,1.27078232765372,3.4324388592045,0,0,0.0752103283492573,6.0511520611056,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,0,0,2.81393990975393,0,0,0,1.21393120847326,2.27662191351298,0.177404740325278,0,0.685952037749674,0.0679697329768317,0,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0,2.05417695252545,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,4.61306097991642,0,0,0,0,0,0,37.0048441800145,0,0,0.109940516745429,49.5158126898689,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0.101988829741982,0,0,0,18.7173384599051,66.4551042787323,0,0,0,0.714193294391221,0,0,2.80329656451534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000510850,p1@ENST00000512260,p1@ENST00000515403 | |short_description=p1@ENST00000510850,p1@ENST00000512260,p1@ENST00000515403 | ||
}} | }} |
Latest revision as of 13:26, 30 July 2015
Short description: | p1@ENST00000510850, p1@ENST00000512260, p1@ENST00000515403 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000510850_5end, CAGE_peak_1_at_ENST00000512260_5end, CAGE_peak_1_at_ENST00000515403_5end |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | 0bp_to_ENST00000510850, ENST00000512260, ENST00000515403_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.03e-10 | 5 |
fibroblast | 3.50e-09 | 76 |
trabecular meshwork cell | 2.09e-07 | 2 |
keratocyte | 2.16e-07 | 2 |
migratory cranial neural crest cell | 2.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subdivision of head | 3.09e-08 | 49 |
reticulum trabeculare | 2.09e-07 | 2 |
aqueous drainage system | 2.09e-07 | 2 |
head connective tissue | 2.16e-07 | 2 |
substantia propria of cornea | 2.16e-07 | 2 |
pituitary gland | 4.52e-07 | 2 |
anterior region of body | 5.03e-07 | 62 |
craniocervical region | 5.03e-07 | 62 |
head | 7.23e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.14e-17 | 51 |
immune system cancer | 4.14e-17 | 51 |
chronic leukemia | 5.33e-15 | 8 |
leukemia | 5.99e-12 | 39 |
myeloid leukemia | 4.49e-09 | 31 |
organ system cancer | 5.24e-09 | 137 |
cancer | 3.99e-07 | 235 |
disease of cellular proliferation | 7.97e-07 | 239 |