FFCP PHASE1:Hg19::chr5:179221043..179221054,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4056 | |EntrezGene=4056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6719 | |HGNC=6719 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000486713_5end | |association_with_transcript=9bp_to_ENST00000486713_5end | ||
|cluster_id=chr5:179221043..179221054,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_3_at_LTC4S_5end | |description=CAGE_peak_3_at_LTC4S_5end | ||
|id=chr5:179221043..179221054,+ | |id=chr5:179221043..179221054,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.51e-10!112;CL:0000049!1.51e-10!112;CL:0002274!7.22e-07!5;CL:0000457!7.22e-07!5;CL:0002191!7.22e-07!5;CL:0000097!7.22e-07!5;CL:0000831!7.22e-07!5;CL:0002028!7.22e-07!5 | |ontology_enrichment_celltype=CL:0000763!1.51e-10!112;CL:0000049!1.51e-10!112;CL:0002274!7.22e-07!5;CL:0000457!7.22e-07!5;CL:0002191!7.22e-07!5;CL:0000097!7.22e-07!5;CL:0000831!7.22e-07!5;CL:0002028!7.22e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.18e-19;5!CL:0000163;9.67e-11;9!CL:0000763;2.36e-09;100!CL:0001014;1.20e-08;2!CL:0001016;1.20e-08;2!CL:0000764;3.70e-08;2!CL:0000558;3.70e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.31e-26,108;CL:0000049,3.31e-26,108;CL:0000097,1.14e-19,5;CL:0002028,1.14e-19,5;CL:0002032,5.47e-15,161;CL:0000837,5.47e-15,161;CL:0000037,4.85e-14,168;CL:0000988,6.20e-13,177;CL:0000163,9.51e-11,9;CL:0001014,1.20e-08,2;CL:0001016,1.20e-08,2;CL:0000764,3.98e-08,2;CL:0000765,3.98e-08,2;CL:0000050,3.98e-08,2;CL:0000038,3.98e-08,2;CL:0000558,3.98e-08,2;CL:0000547,3.98e-08,2;CL:0000549,3.98e-08,2;CL:0000550,3.98e-08,2;CL:0000552,3.98e-08,2;CL:0000557,2.55e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000049;6.24e-08;108!UBERON:0006965;7.12e-08;2 | |||
|ontology_enrichment_disease=DOID:8692!6.57e-13!31;DOID:1240!1.54e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.06e-32;31!DOID:1240;5.34e-20;39!DOID:2531;2.55e-11;51!DOID:0060083;2.55e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.17e-33,31;DOID:1240,8.64e-26,39;DOID:2531,1.24e-18,51;DOID:0060083,1.24e-18,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.82e-27!115;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!8.82e-27!115;UBERON:0001049!1.14e-07!57;UBERON:0005068!1.14e-07!57;UBERON:0006241!1.14e-07!57;UBERON:0007135!1.14e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0,0,0,1.34349284543955,0.647787332037959,1.28787783817093,0.581592955118259,0.377875943688809,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,2.37045676297569,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0,7.31420598941885,0.670700859703636,0.767175371061182,0.361439152384566,0,0,1.5905718941022,0.973269740605272,0,0,0.087834785693126,0.72038491523742,0,0,0.324547393654683,0.870648686496336,2.92507513141503,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.72101972449288,0.354668382198357,1.68203280042692,0,0.49333509683432,0.622422070799533,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.340296549480063,0.358779271377724,0,0,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,5.88034845542168,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,8.86793828212698,92.4508557138873,19.4888428608326,28.6798707299753,20.3250317816472,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0,0,0,0.232420756919918,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,2.3529190592241,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,6.58611925728295,0.5745161103971,0.211673582723883,0,2.80797178113459,2.05411211129873,0.313359791546046,0,1.52362600021443,0.1605880751037,0.403599414382095,2.12923118845163,2.74804275804612,4.60861146462687,3.13146551049382,2.66958626739054,1.17232857241224,0,0,18.3909861363669,17.6528143038845,7.04935025439248,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,16.8818882174868,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.886642856860642,0,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0,0,0,8.47693384533134,6.98089063980657,0,0,0,0,3.65554131654871,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0,0,1.14581926067151,0.802577647298789,1.40558667435203,0,0,0,0.394584402849391,0,0.61214552326098,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.379864775735272,0,0,1.49417096317547,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.273810757783986,1.27746588066972,0.429765441419957,0,1.67569440763353,1.60412296808179,0.717873024576814,0.599037001496973,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,4.72445172258151,19.3450488639487,0.546746009922222,0,0.630445658393585,0.262272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,1.97022049798414,0,0,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.78602152549833,6.62782488555513,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,1.34699795506368,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.844712203265363,0,0,0,0.691292180758654,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0.0788617450012534,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0.762764190934334,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.253663240775627,0,0,1.48863353516788,0.175871244359621,0,0,0.336283722218824,0,0,0.354809480650555,0,0,0.271878931907327,0.394636641377094,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,1.29068207646083,0,0,0.846774100381858,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0.785233868459781,0.891139200981258,0.8453114551668,0,0.469919589899268,0.386747327841463,0,0,0,0,0,1.37618785021362,1.29005624836306,0,0.475940431336403,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.724030971033267,0.639701945702943,0.714193294391221,0,0,0,0,0.606351566874658,0.870866991587845,0.684466602170562,0.134704106029175,0.358611026963382,1.33064142618405,0,0,0,0,0,0.977931553462932,0.406896178315738,0,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0,0,0,1.34349284543955,0.647787332037959,1.28787783817093,0.581592955118259,0.377875943688809,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,2.37045676297569,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0,7.31420598941885,0.670700859703636,0.767175371061182,0.361439152384566,0,0,1.5905718941022,0.973269740605272,0,0,0.087834785693126,0.72038491523742,0,0,0.324547393654683,0.870648686496336,2.92507513141503,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,1.72101972449288,0.354668382198357,1.68203280042692,0,0.49333509683432,0.622422070799533,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.340296549480063,0.358779271377724,0,0,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,5.88034845542168,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,8.86793828212698,92.4508557138873,19.4888428608326,28.6798707299753,20.3250317816472,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0.431428401637234,0.106727557803444,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0,0,0,0.232420756919918,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,2.3529190592241,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,6.58611925728295,0.5745161103971,0.211673582723883,0,2.80797178113459,2.05411211129873,0.313359791546046,0,1.52362600021443,0.1605880751037,0.403599414382095,2.12923118845163,2.74804275804612,4.60861146462687,3.13146551049382,2.66958626739054,1.17232857241224,0,0,18.3909861363669,17.6528143038845,7.04935025439248,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,16.8818882174868,0.197286811273867,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.886642856860642,0,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0,0,0,8.47693384533134,6.98089063980657,0,0,0,0,3.65554131654871,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0,0,1.14581926067151,0.802577647298789,1.40558667435203,0,0,0,0.394584402849391,0,0.61214552326098,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.379864775735272,0,0,1.49417096317547,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.273810757783986,1.27746588066972,0.429765441419957,0,1.67569440763353,1.60412296808179,0.717873024576814,0.599037001496973,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,4.72445172258151,19.3450488639487,0.546746009922222,0,0.630445658393585,0.262272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,1.97022049798414,0,0,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.78602152549833,6.62782488555513,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,1.34699795506368,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.844712203265363,0,0,0,0.691292180758654,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0.0788617450012534,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.484100767249525,0,0,0,0,0,0,0.762764190934334,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.253663240775627,0,0,1.48863353516788,0.175871244359621,0,0,0.336283722218824,0,0,0.354809480650555,0,0,0.271878931907327,0.394636641377094,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,1.29068207646083,0,0,0.846774100381858,0,0,0,0,0,0,1.29485767437579,0.102662806856247,0,0,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0.245148321753905,0,0.785233868459781,0.891139200981258,0.8453114551668,0,0.469919589899268,0.386747327841463,0,0,0,0,0,1.37618785021362,1.29005624836306,0,0.475940431336403,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.724030971033267,0.639701945702943,0.714193294391221,0,0,0,0,0.606351566874658,0.870866991587845,0.684466602170562,0.134704106029175,0.358611026963382,1.33064142618405,0,0,0,0,0,0.977931553462932,0.406896178315738,0,2.01273793591026,0 | ||
|short_description=p3@LTC4S | |short_description=p3@LTC4S | ||
}} | }} |
Latest revision as of 09:20, 17 September 2015
Short description: | p3@LTC4S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LTC4S_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 9bp_to_ENST00000486713_5end |
EntrezGene: | LTC4S |
HGNC: | 6719 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.31e-26 | 108 |
common myeloid progenitor | 3.31e-26 | 108 |
mast cell | 1.14e-19 | 5 |
basophil mast progenitor cell | 1.14e-19 | 5 |
hematopoietic oligopotent progenitor cell | 5.47e-15 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-15 | 161 |
hematopoietic stem cell | 4.85e-14 | 168 |
hematopoietic cell | 6.20e-13 | 177 |
endocrine cell | 9.51e-11 | 9 |
CD1a-positive Langerhans cell | 1.20e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.20e-08 | 2 |
erythroid lineage cell | 3.98e-08 | 2 |
erythroblast | 3.98e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 3.98e-08 | 2 |
erythroid progenitor cell | 3.98e-08 | 2 |
reticulocyte | 3.98e-08 | 2 |
proerythroblast | 3.98e-08 | 2 |
basophilic erythroblast | 3.98e-08 | 2 |
polychromatophilic erythroblast | 3.98e-08 | 2 |
orthochromatic erythroblast | 3.98e-08 | 2 |
granulocyte monocyte progenitor cell | 2.55e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.17e-33 | 31 |
leukemia | 8.64e-26 | 39 |
hematologic cancer | 1.24e-18 | 51 |
immune system cancer | 1.24e-18 | 51 |