FFCP PHASE1:Hg19::chr5:57877892..57877903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_ENST00000513316_5end | |association_with_transcript=-144bp_to_ENST00000513316_5end | ||
|cluster_id=chr5:57877892..57877903,+ | |||
|coexpression_cluster_id=C4507 | |||
|description=CAGE_peak_6_at_RAB3C_5end | |description=CAGE_peak_6_at_RAB3C_5end | ||
|id=chr5:57877892..57877903,+ | |id=chr5:57877892..57877903,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.02e-16;2!UBERON:0006601;9.07e-14;82!UBERON:0006222;6.98e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.03e-77!57;UBERON:0005068!8.03e-77!57;UBERON:0006241!8.03e-77!57;UBERON:0007135!8.03e-77!57;UBERON:0002616!8.83e-64!59;UBERON:0001017!1.41e-63!82;UBERON:0005743!2.36e-62!86;UBERON:0000955!5.77e-60!69;UBERON:0006238!5.77e-60!69;UBERON:0002780!1.96e-58!41;UBERON:0001890!1.96e-58!41;UBERON:0006240!1.96e-58!41;UBERON:0000073!2.99e-57!94;UBERON:0001016!2.99e-57!94;UBERON:0003080!8.16e-57!42;UBERON:0003075!5.18e-53!86;UBERON:0007284!5.18e-53!86;UBERON:0002346!5.09e-50!90;UBERON:0007023!6.96e-49!115;UBERON:0002020!1.85e-44!34;UBERON:0003528!1.85e-44!34;UBERON:0001893!7.83e-44!34;UBERON:0001869!9.84e-44!32;UBERON:0002791!7.25e-42!33;UBERON:0003056!2.03e-40!61;UBERON:0002619!1.47e-34!22;UBERON:0000033!2.34e-32!123;UBERON:0001950!1.31e-30!20;UBERON:0000153!3.31e-30!129;UBERON:0007811!3.31e-30!129;UBERON:0000956!7.21e-30!25;UBERON:0000203!7.21e-30!25;UBERON:0004121!1.70e-26!169;UBERON:0000924!1.54e-25!173;UBERON:0006601!1.54e-25!173;UBERON:0000025!1.09e-20!194;UBERON:0003076!4.12e-20!15;UBERON:0003057!4.12e-20!15;UBERON:0004111!6.40e-17!241;UBERON:0001894!1.98e-16!7;UBERON:0006222!1.98e-16!7;UBERON:0002308!3.49e-16!9;UBERON:0000125!3.49e-16!9;UBERON:0004733!1.30e-14!12;UBERON:0002028!1.30e-14!12;UBERON:0007277!1.30e-14!12;UBERON:0000200!8.99e-14!6;UBERON:0004732!2.49e-13!13;UBERON:0000477!2.91e-13!286;UBERON:0009663!6.76e-12!7;UBERON:0002420!8.53e-12!9;UBERON:0007245!8.53e-12!9;UBERON:0010009!8.53e-12!9;UBERON:0010011!8.53e-12!9;UBERON:0000454!8.53e-12!9;UBERON:0002021!4.33e-11!5;UBERON:0002298!1.42e-10!8;UBERON:0000369!3.31e-10!4;UBERON:0002435!3.31e-10!4;UBERON:0000204!3.31e-10!4;UBERON:0010082!3.31e-10!4;UBERON:0003296!3.80e-10!4;UBERON:0010133!3.80e-10!4;UBERON:0000483!5.35e-10!309;UBERON:0000119!9.16e-10!312;UBERON:0001871!1.72e-09!7;UBERON:0000064!3.00e-09!219;UBERON:0002680!4.13e-09!9;UBERON:0001895!4.13e-09!9;UBERON:0010092!4.13e-09!9;UBERON:0000988!2.35e-08!3;UBERON:0005383!3.59e-08!3;UBERON:0005382!3.59e-08!3;UBERON:0001896!9.60e-08!3;UBERON:0005290!9.60e-08!3;UBERON:0010096!9.60e-08!3;UBERON:0002771!1.15e-07!3;UBERON:0000475!1.19e-07!365;UBERON:0001872!1.50e-07!5;UBERON:0002240!1.96e-07!3;UBERON:0000349!2.37e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!8.03e-77!57;UBERON:0005068!8.03e-77!57;UBERON:0006241!8.03e-77!57;UBERON:0007135!8.03e-77!57;UBERON:0002616!8.83e-64!59;UBERON:0001017!1.41e-63!82;UBERON:0005743!2.36e-62!86;UBERON:0000955!5.77e-60!69;UBERON:0006238!5.77e-60!69;UBERON:0002780!1.96e-58!41;UBERON:0001890!1.96e-58!41;UBERON:0006240!1.96e-58!41;UBERON:0000073!2.99e-57!94;UBERON:0001016!2.99e-57!94;UBERON:0003080!8.16e-57!42;UBERON:0003075!5.18e-53!86;UBERON:0007284!5.18e-53!86;UBERON:0002346!5.09e-50!90;UBERON:0007023!6.96e-49!115;UBERON:0002020!1.85e-44!34;UBERON:0003528!1.85e-44!34;UBERON:0001893!7.83e-44!34;UBERON:0001869!9.84e-44!32;UBERON:0002791!7.25e-42!33;UBERON:0003056!2.03e-40!61;UBERON:0002619!1.47e-34!22;UBERON:0000033!2.34e-32!123;UBERON:0001950!1.31e-30!20;UBERON:0000153!3.31e-30!129;UBERON:0007811!3.31e-30!129;UBERON:0000956!7.21e-30!25;UBERON:0000203!7.21e-30!25;UBERON:0004121!1.70e-26!169;UBERON:0000924!1.54e-25!173;UBERON:0006601!1.54e-25!173;UBERON:0000025!1.09e-20!194;UBERON:0003076!4.12e-20!15;UBERON:0003057!4.12e-20!15;UBERON:0004111!6.40e-17!241;UBERON:0001894!1.98e-16!7;UBERON:0006222!1.98e-16!7;UBERON:0002308!3.49e-16!9;UBERON:0000125!3.49e-16!9;UBERON:0004733!1.30e-14!12;UBERON:0002028!1.30e-14!12;UBERON:0007277!1.30e-14!12;UBERON:0000200!8.99e-14!6;UBERON:0004732!2.49e-13!13;UBERON:0000477!2.91e-13!286;UBERON:0009663!6.76e-12!7;UBERON:0002420!8.53e-12!9;UBERON:0007245!8.53e-12!9;UBERON:0010009!8.53e-12!9;UBERON:0010011!8.53e-12!9;UBERON:0000454!8.53e-12!9;UBERON:0002021!4.33e-11!5;UBERON:0002298!1.42e-10!8;UBERON:0000369!3.31e-10!4;UBERON:0002435!3.31e-10!4;UBERON:0000204!3.31e-10!4;UBERON:0010082!3.31e-10!4;UBERON:0003296!3.80e-10!4;UBERON:0010133!3.80e-10!4;UBERON:0000483!5.35e-10!309;UBERON:0000119!9.16e-10!312;UBERON:0001871!1.72e-09!7;UBERON:0000064!3.00e-09!219;UBERON:0002680!4.13e-09!9;UBERON:0001895!4.13e-09!9;UBERON:0010092!4.13e-09!9;UBERON:0000988!2.35e-08!3;UBERON:0005383!3.59e-08!3;UBERON:0005382!3.59e-08!3;UBERON:0001896!9.60e-08!3;UBERON:0005290!9.60e-08!3;UBERON:0010096!9.60e-08!3;UBERON:0002771!1.15e-07!3;UBERON:0000475!1.19e-07!365;UBERON:0001872!1.50e-07!5;UBERON:0002240!1.96e-07!3;UBERON:0000349!2.37e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.85e-31;53!UBERON:0002616;1.85e-31;53!UBERON:0003528;1.88e-31;34!UBERON:0002020;1.88e-31;34!UBERON:0002780;3.09e-30;41!UBERON:0001890;3.09e-30;41!UBERON:0000125;4.44e-30;9!UBERON:0002308;4.44e-30;9!UBERON:0001894;1.18e-27;7!UBERON:0000955;9.03e-25;68!UBERON:0001869;1.34e-24;32!UBERON:0002791;1.41e-24;32!UBERON:0000988;6.49e-24;3!UBERON:0005383;1.53e-23;3!UBERON:0005382;1.53e-23;3!UBERON:0001893;2.76e-22;34!UBERON:0002298;4.91e-21;6!UBERON:0001017;5.02e-21;75!UBERON:0003296;4.27e-18;4!UBERON:0010133;4.27e-18;4!UBERON:0000369;8.09e-18;4!UBERON:0002435;8.09e-18;4!UBERON:0000204;8.09e-18;4!UBERON:0009663;1.20e-17;7!UBERON:0000007;2.02e-16;2!UBERON:0001873;2.02e-16;2!UBERON:0002148;2.02e-16;2!UBERON:0006331;2.02e-16;2!UBERON:0009662;2.02e-16;2!UBERON:0001016;3.80e-16;83!UBERON:0004733;5.14e-16;12!UBERON:0002028;5.14e-16;12!UBERON:0002619;1.05e-15;22!UBERON:0004732;8.97e-15;13!UBERON:0002680;6.13e-14;9!UBERON:0001895;6.13e-14;9!UBERON:0000956;8.37e-14;25!UBERON:0000203;8.37e-14;25!UBERON:0002420;8.88e-14;9!UBERON:0007245;8.88e-14;9!UBERON:0010009;8.88e-14;9!UBERON:0010011;8.88e-14;9!UBERON:0000454;8.88e-14;9!UBERON:0001950;1.04e-12;20!UBERON:0001870;2.15e-11;3!UBERON:0007023;7.65e-11;114!UBERON:0002784;5.99e-09;4!UBERON:0002022;6.98e-09;1!UBERON:0001874;6.98e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.40e-61,56;UBERON:0005068,2.40e-61,56;UBERON:0006241,2.40e-61,56;UBERON:0007135,2.40e-61,56;UBERON:0000073,4.88e-59,53;UBERON:0002616,4.88e-59,53;UBERON:0000955,9.58e-45,68;UBERON:0006238,9.58e-45,68;UBERON:0002780,1.11e-43,41;UBERON:0001890,1.11e-43,41;UBERON:0003080,1.11e-43,41;UBERON:0006240,1.11e-43,41;UBERON:0001017,5.26e-41,81;UBERON:0003075,5.26e-41,82;UBERON:0007284,5.26e-41,82;UBERON:0002346,5.93e-39,86;UBERON:0001016,1.23e-36,89;UBERON:0003528,1.77e-34,34;UBERON:0002020,1.77e-34,34;UBERON:0010371,1.20e-31,104;UBERON:0000125,3.63e-30,9;UBERON:0002308,3.63e-30,9;UBERON:0003056,1.14e-28,61;UBERON:0001894,1.03e-27,7;UBERON:0006222,1.03e-27,7;UBERON:0007023,4.31e-26,114;UBERON:0002791,4.97e-26,32;UBERON:0001869,4.97e-26,32;UBERON:0001893,1.94e-24,34;UBERON:0000988,3.34e-24,3;UBERON:0010314,3.35e-24,132;UBERON:0005383,1.36e-23,3;UBERON:0005382,1.36e-23,3;UBERON:0002298,3.80e-21,6;UBERON:0000025,4.55e-19,192;UBERON:0003076,3.96e-18,15;UBERON:0003057,3.96e-18,15;UBERON:0003296,4.95e-18,4;UBERON:0010133,4.95e-18,4;UBERON:0000369,7.43e-18,4;UBERON:0002435,7.43e-18,4;UBERON:0000204,7.43e-18,4;UBERON:0010082,7.43e-18,4;UBERON:0009663,1.25e-17,7;UBERON:0004121,1.32e-17,171;UBERON:0000924,1.32e-17,171;UBERON:0006601,1.32e-17,171;UBERON:0011216,3.08e-17,223;UBERON:0002148,1.37e-16,2;UBERON:0006331,1.37e-16,2;UBERON:0009662,1.37e-16,2;UBERON:0001873,1.88e-16,2;UBERON:0010122,1.88e-16,2;UBERON:0000007,2.99e-16,2;UBERON:0004733,3.93e-16,12;UBERON:0002028,3.93e-16,12;UBERON:0007277,3.93e-16,12;UBERON:0002619,1.60e-15,22;UBERON:0004732,7.01e-15,13;UBERON:0004111,1.79e-14,240;UBERON:0002680,4.09e-14,9;UBERON:0001895,4.09e-14,9;UBERON:0010092,4.09e-14,9;UBERON:0002420,9.19e-14,9;UBERON:0007245,9.19e-14,9;UBERON:0010009,9.19e-14,9;UBERON:0010011,9.19e-14,9;UBERON:0000454,9.19e-14,9;UBERON:0000956,1.21e-13,25;UBERON:0000203,1.21e-13,25;UBERON:0001950,1.49e-12,20;UBERON:0001870,2.93e-11,3;UBERON:0000483,1.75e-10,306;UBERON:0000119,2.42e-10,309;UBERON:0002784,5.54e-09,4;UBERON:0001874,6.72e-09,1;UBERON:0002022,1.07e-08,1 | |||
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|short_description=p6@RAB3C | |short_description=p6@RAB3C | ||
}} | }} |
Latest revision as of 06:27, 18 September 2015
Short description: | p6@RAB3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAB3C_5end |
Coexpression cluster: | C4507_large_thalamus_small_pituitary_medial_Mast_locus |
Association with transcript: | -144bp_to_ENST00000513316_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data