FFCP PHASE1:Hg19::chr6:113697400..113697411,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:113697400..113697411,- | |||
|coexpression_cluster_id=C2837 | |||
|description=CAGE_peak_at_chr6:113697400..113697411,- | |description=CAGE_peak_at_chr6:113697400..113697411,- | ||
|id=chr6:113697400..113697411,- | |id=chr6:113697400..113697411,- | ||
|ontology_enrichment_celltype=CL:0000057!6.93e-37!75;CL:0002620!2.92e-35!23;CL:0000055!1.81e-24!180;CL:0002594!1.59e-09!4;CL:0000048!2.35e-09!430;CL:0000723!5.22e-09!436;CL:0000034!1.46e-08!444;CL:0000135!1.46e-08!3;CL:0000386!1.46e-08!3;CL:0000388!1.46e-08!3;CL:0002334!2.86e-08!12;CL:0002579!3.21e-07!3;CL:0000134!4.76e-07!358 | |ontology_enrichment_celltype=CL:0000057!6.93e-37!75;CL:0002620!2.92e-35!23;CL:0000055!1.81e-24!180;CL:0002594!1.59e-09!4;CL:0000048!2.35e-09!430;CL:0000723!5.22e-09!436;CL:0000034!1.46e-08!444;CL:0000135!1.46e-08!3;CL:0000386!1.46e-08!3;CL:0000388!1.46e-08!3;CL:0002334!2.86e-08!12;CL:0002579!3.21e-07!3;CL:0000134!4.76e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.44e-42;23!CL:0000135;1.94e-17;3!CL:0000388;1.94e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.99e-42,23;CL:0000057,7.00e-26,76;CL:0000135,2.50e-17,3;CL:0000388,2.50e-17,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.10e-12!5;DOID:450!1.10e-12!5;DOID:66!1.10e-12!5;DOID:423!1.10e-12!5;DOID:0080000!1.10e-12!5;DOID:11722!1.10e-12!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;1.04e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.07e-21!45;UBERON:0002416!5.07e-21!45;UBERON:0002097!4.47e-20!40;UBERON:0003102!1.01e-12!95;UBERON:0001310!1.59e-09!4;UBERON:0000043!1.46e-08!3;UBERON:0002384!3.07e-07!375 | |ontology_enrichment_uberon=UBERON:0002199!5.07e-21!45;UBERON:0002416!5.07e-21!45;UBERON:0002097!4.47e-20!40;UBERON:0003102!1.01e-12!95;UBERON:0001310!1.59e-09!4;UBERON:0000043!1.46e-08!3;UBERON:0002384!3.07e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.94e-17;3!UBERON:0000043;1.94e-17;3!UBERON:0007845;1.94e-17;3!UBERON:0002097;7.10e-17;41!UBERON:0002199;1.03e-13;46!UBERON:0002416;1.03e-13;46!UBERON:0003102;3.96e-11;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.99e-23,41;UBERON:0002199,8.80e-21,46;UBERON:0002416,8.80e-21,46;UBERON:0007846,2.50e-17,3;UBERON:0000043,2.50e-17,3;UBERON:0007845,2.50e-17,3;UBERON:0003102,2.52e-11,99 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,1.32409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0.561803226808994,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0.554128230968366,0,1.5324389789951,0.751190294532984,0,0.538168907066586,0.85422955527427,0.211931901159562,1.20036438433761,0.824420233907511,2.31876486041066,1.67505170698431,1.18143432568886,1.85130309806277,1.26216887122057,0.184099797284599,0.161646056818812,2.13005755509969,1.0075209822764,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.788512075169673,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.492762936082855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,7.15629691498771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0,0,0,0.457680136793847,0,0.310874401165561,0,0.318593534327405,0,0.155262956876259,0,0.797525143673985,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,2.31522474323834,0,0.895444205407437,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:113697400..113697411,- | |short_description=p@chr6:113697400..113697411,- | ||
}} | }} |
Latest revision as of 18:28, 30 July 2015
Short description: | p@chr6:113697400..113697411, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:113697400..113697411, - |
Coexpression cluster: | C2837_liposarcoma_Fibroblast_Ewing_Olfactory_mesothelioma_Smooth_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.99e-42 | 23 |
fibroblast | 7.00e-26 | 76 |
fibrocyte | 2.50e-17 | 3 |
tendon cell | 2.50e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.99e-23 | 41 |
integument | 8.80e-21 | 46 |
integumental system | 8.80e-21 | 46 |
dense regular connective tissue | 2.50e-17 | 3 |
tendon | 2.50e-17 | 3 |
regular connective tissue | 2.50e-17 | 3 |
surface structure | 2.52e-11 | 99 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.15e-14 | 1 |