FFCP PHASE1:Hg19::chr6:1389690..1389700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:1389690..1389700,- | |||
|description=CAGE_peak_at_chr6:1389690..1389700,- | |description=CAGE_peak_at_chr6:1389690..1389700,- | ||
|id=chr6:1389690..1389700,- | |id=chr6:1389690..1389700,- | ||
|ontology_enrichment_celltype=CL:0002556!2.00e-10!6;CL:0002552!2.15e-09!5;CL:0000057!2.30e-08!75 | |ontology_enrichment_celltype=CL:0002556!2.00e-10!6;CL:0002552!2.15e-09!5;CL:0000057!2.30e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002552;9.94e-38;5!CL:0002574;5.37e-13;1!CL:0002556;1.04e-08;6!CL:0002598;3.92e-07;2!CL:0002600;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,9.52e-38,5;CL:0002574,9.73e-13,1;CL:0002556,1.08e-08,6;CL:0002598,3.28e-07,2;CL:0002600,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;4.37e-25;2!DOID:0050619;5.37e-13;1!DOID:1357;5.37e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.38e-25,2;DOID:0050619,3.33e-13,1;DOID:1357,3.33e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000153!2.97e-13!129;UBERON:0007811!2.97e-13!129;UBERON:0000033!8.23e-13!123;UBERON:0001007!1.66e-10!155;UBERON:0001555!1.66e-10!155;UBERON:0007026!1.66e-10!155;UBERON:0001758!2.00e-10!6;UBERON:0003672!2.00e-10!6;UBERON:0000165!1.03e-09!28;UBERON:0000930!1.03e-09!28;UBERON:0004119!2.92e-09!169;UBERON:0000925!2.92e-09!169;UBERON:0006595!2.92e-09!169;UBERON:0000475!9.85e-09!365;UBERON:0001444!1.53e-08!48;UBERON:0000064!2.45e-08!219;UBERON:0007023!2.78e-08!115;UBERON:0000075!3.11e-07!13;UBERON:0005944!3.11e-07!13;UBERON:0004288!3.11e-07!13;UBERON:0003089!3.11e-07!13;UBERON:0000481!3.76e-07!347;UBERON:0003102!5.10e-07!95;UBERON:0003129!7.09e-07!11 | |ontology_enrichment_uberon=UBERON:0000153!2.97e-13!129;UBERON:0007811!2.97e-13!129;UBERON:0000033!8.23e-13!123;UBERON:0001007!1.66e-10!155;UBERON:0001555!1.66e-10!155;UBERON:0007026!1.66e-10!155;UBERON:0001758!2.00e-10!6;UBERON:0003672!2.00e-10!6;UBERON:0000165!1.03e-09!28;UBERON:0000930!1.03e-09!28;UBERON:0004119!2.92e-09!169;UBERON:0000925!2.92e-09!169;UBERON:0006595!2.92e-09!169;UBERON:0000475!9.85e-09!365;UBERON:0001444!1.53e-08!48;UBERON:0000064!2.45e-08!219;UBERON:0007023!2.78e-08!115;UBERON:0000075!3.11e-07!13;UBERON:0005944!3.11e-07!13;UBERON:0004288!3.11e-07!13;UBERON:0003089!3.11e-07!13;UBERON:0000481!3.76e-07!347;UBERON:0003102!5.10e-07!95;UBERON:0003129!7.09e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001828;9.71e-24;8!UBERON:0003729;9.80e-15;13!UBERON:0000165;1.02e-14;28!UBERON:0000344;1.30e-14;20!UBERON:0001764;5.37e-13;1!UBERON:0001825;5.37e-13;1!UBERON:0000033;2.09e-11;50!UBERON:0007811;3.47e-11;52!UBERON:0000161;3.68e-10;19!UBERON:0000166;3.68e-10;19!UBERON:0001444;5.23e-10;48!UBERON:0000153;5.17e-09;54!UBERON:0001758;1.04e-08;6!UBERON:0003672;1.04e-08;6!UBERON:0001555;3.53e-08;54!UBERON:0003129;1.38e-07;7!UBERON:0002702;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,9.45e-24,8;UBERON:0003729,9.65e-15,13;UBERON:0000344,1.40e-14,20;UBERON:0000165,3.41e-14,29;UBERON:0000930,3.41e-14,29;UBERON:0001764,3.33e-13,1;UBERON:0001825,3.33e-13,1;UBERON:0000033,1.51e-12,56;UBERON:0000153,2.99e-11,62;UBERON:0007811,2.99e-11,62;UBERON:0001444,4.19e-11,49;UBERON:0000166,8.31e-09,22;UBERON:0001758,1.08e-08,6;UBERON:0003672,1.08e-08,6;UBERON:0003129,1.43e-07,7;UBERON:0002702,2.91e-07,2;UBERON:0001004,3.73e-07,74 | |||
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|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,1.02077085627447,0.491337269247072,1.85986406116378,3.56400857184616,1.48360157567134,0,0,1.34668891163253,0.750711119231785,1.38532057742091,0.438977620880838,0.612975591598039,0.751190294532984,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0,0.484938170456436,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0,0,0,0,0,1.04260337361699,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.328508624055237,0,0.232420756919918,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,1.535386747868,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0.872901148395775,0.176512253383001,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,1.57054096250234,1.77213635993397,0.244052529803926,0.250381861413,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0.352675943690684,1.2249819094128,0.449604575675217,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.19024743058172,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.78493092850514,0,0,0,0,0,1.50100742770978,0.94808167039636,0,0,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.231522474323834,0.874238242015829,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,2.92134555298607,0,0,1.10440093535229,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.12729431655633,0.202117188958219,0,0.684466602170562,0.134704106029175,0.286888821570705,0.332660356546013,0.244209805832924,0,3.8614456457388,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:1389690..1389700,- | |short_description=p@chr6:1389690..1389700,- | ||
}} | }} |
Latest revision as of 20:10, 30 July 2015
Short description: | p@chr6:1389690..1389700, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:1389690..1389700, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 9.52e-38 | 5 |
stromal cell of pancreas | 9.73e-13 | 1 |
fibroblast of periodontium | 1.08e-08 | 6 |
bronchial smooth muscle cell | 3.28e-07 | 2 |
smooth muscle cell of trachea | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 9.45e-24 | 8 |
mouth mucosa | 9.65e-15 | 13 |
mucosa | 1.40e-14 | 20 |
mouth | 3.41e-14 | 29 |
stomodeum | 3.41e-14 | 29 |
maxillary sinus | 3.33e-13 | 1 |
paranasal sinus | 3.33e-13 | 1 |
head | 1.51e-12 | 56 |
anterior region of body | 2.99e-11 | 62 |
craniocervical region | 2.99e-11 | 62 |
subdivision of head | 4.19e-11 | 49 |
oral opening | 8.31e-09 | 22 |
periodontium | 1.08e-08 | 6 |
dentition | 1.08e-08 | 6 |
skull | 1.43e-07 | 7 |
middle frontal gyrus | 2.91e-07 | 2 |
respiratory system | 3.73e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.38e-25 | 2 |
paranasal sinus cancer | 3.33e-13 | 1 |
maxillary sinus cancer | 3.33e-13 | 1 |