FFCP PHASE1:Hg19::chr6:146350744..146350749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2911 | |EntrezGene=2911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4593 | |HGNC=4593 | ||
|TSSclassifier=strong | |||
|UniProt=Q59HC2 | |UniProt=Q59HC2 | ||
|association_with_transcript=77bp_to_AB208837_5end | |association_with_transcript=77bp_to_AB208837_5end | ||
|cluster_id=chr6:146350744..146350749,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_8_at_GRM1_5end | |description=CAGE_peak_8_at_GRM1_5end | ||
|id=chr6:146350744..146350749,+ | |id=chr6:146350744..146350749,+ | ||
|ontology_enrichment_celltype=CL:0000785!2.31e-21!2;CL:0000955!2.31e-21!2;CL:0000818!2.31e-21!2;CL:0000954!2.31e-21!2;CL:0000816!2.31e-21!2;CL:0000945!5.54e-20!24;CL:0000826!5.54e-20!24;CL:0000817!1.41e-14!3;CL:0000946!9.57e-12!1;CL:0000786!9.57e-12!1;CL:0000980!9.57e-12!1;CL:0000819!2.18e-11!1;CL:0000838!7.45e-09!52;CL:0002322!9.20e-09!5;CL:0000542!1.13e-08!53;CL:0000051!1.13e-08!53 | |ontology_enrichment_celltype=CL:0000785!2.31e-21!2;CL:0000955!2.31e-21!2;CL:0000818!2.31e-21!2;CL:0000954!2.31e-21!2;CL:0000816!2.31e-21!2;CL:0000945!5.54e-20!24;CL:0000826!5.54e-20!24;CL:0000817!1.41e-14!3;CL:0000946!9.57e-12!1;CL:0000786!9.57e-12!1;CL:0000980!9.57e-12!1;CL:0000819!2.18e-11!1;CL:0000838!7.45e-09!52;CL:0002322!9.20e-09!5;CL:0000542!1.13e-08!53;CL:0000051!1.13e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.39e-66;1!CL:0000786;2.39e-66;1!CL:0000945;4.20e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.39e-66,1;CL:0000786,2.39e-66,1;CL:0000980,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000817,3.27e-23,3;CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000954;5.04e-34;2!UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:630!1.60e-11!1;DOID:0050177!1.60e-11!1;DOID:0050427!1.60e-11!1;DOID:0060073!2.18e-11!1;DOID:8675!2.18e-11!1;DOID:0060058!8.24e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.38e-27;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.38e-27,10 | |||
|ontology_enrichment_uberon=UBERON:0002680!6.37e-18!9;UBERON:0001895!6.37e-18!9;UBERON:0010092!6.37e-18!9;UBERON:0002771!4.42e-14!3;UBERON:0000988!6.58e-14!3;UBERON:0004733!1.65e-13!12;UBERON:0002028!1.65e-13!12;UBERON:0007277!1.65e-13!12;UBERON:0001049!1.40e-12!57;UBERON:0005068!1.40e-12!57;UBERON:0006241!1.40e-12!57;UBERON:0007135!1.40e-12!57;UBERON:0004732!1.73e-12!13;UBERON:0002616!4.03e-12!59;UBERON:0001950!1.33e-11!20;UBERON:0001871!1.39e-11!7;UBERON:0002022!4.44e-11!1;UBERON:0003076!7.49e-11!15;UBERON:0003057!7.49e-11!15;UBERON:0002619!1.38e-10!22;UBERON:0000955!4.64e-10!69;UBERON:0006238!4.64e-10!69;UBERON:0002020!1.06e-09!34;UBERON:0003528!1.06e-09!34;UBERON:0000956!2.37e-09!25;UBERON:0000203!2.37e-09!25;UBERON:0001017!2.56e-08!82;UBERON:0003075!5.45e-08!86;UBERON:0007284!5.45e-08!86;UBERON:0005743!6.93e-08!86;UBERON:0002037!9.90e-08!6;UBERON:0006215!9.90e-08!6;UBERON:0002346!1.38e-07!90;UBERON:0000200!1.74e-07!6;UBERON:0001869!2.44e-07!32;UBERON:0002791!4.06e-07!33;UBERON:0000073!4.83e-07!94;UBERON:0001016!4.83e-07!94;UBERON:0001893!6.54e-07!34 | |ontology_enrichment_uberon=UBERON:0002680!6.37e-18!9;UBERON:0001895!6.37e-18!9;UBERON:0010092!6.37e-18!9;UBERON:0002771!4.42e-14!3;UBERON:0000988!6.58e-14!3;UBERON:0004733!1.65e-13!12;UBERON:0002028!1.65e-13!12;UBERON:0007277!1.65e-13!12;UBERON:0001049!1.40e-12!57;UBERON:0005068!1.40e-12!57;UBERON:0006241!1.40e-12!57;UBERON:0007135!1.40e-12!57;UBERON:0004732!1.73e-12!13;UBERON:0002616!4.03e-12!59;UBERON:0001950!1.33e-11!20;UBERON:0001871!1.39e-11!7;UBERON:0002022!4.44e-11!1;UBERON:0003076!7.49e-11!15;UBERON:0003057!7.49e-11!15;UBERON:0002619!1.38e-10!22;UBERON:0000955!4.64e-10!69;UBERON:0006238!4.64e-10!69;UBERON:0002020!1.06e-09!34;UBERON:0003528!1.06e-09!34;UBERON:0000956!2.37e-09!25;UBERON:0000203!2.37e-09!25;UBERON:0001017!2.56e-08!82;UBERON:0003075!5.45e-08!86;UBERON:0007284!5.45e-08!86;UBERON:0005743!6.93e-08!86;UBERON:0002037!9.90e-08!6;UBERON:0006215!9.90e-08!6;UBERON:0002346!1.38e-07!90;UBERON:0000200!1.74e-07!6;UBERON:0001869!2.44e-07!32;UBERON:0002791!4.06e-07!33;UBERON:0000073!4.83e-07!94;UBERON:0001016!4.83e-07!94;UBERON:0001893!6.54e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p8@GRM1 | |short_description=p8@GRM1 | ||
}} | }} |
Latest revision as of 22:52, 15 September 2015
Short description: | p8@GRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRM1_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 77bp_to_AB208837_5end |
EntrezGene: | GRM1 |
HGNC: | 4593 |
UniProt: | Q59HC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.39e-66 | 1 |
plasma cell | 2.39e-66 | 1 |
plasmablast | 2.39e-66 | 1 |
mature B cell | 5.04e-34 | 2 |
pre-B-II cell | 5.04e-34 | 2 |
transitional stage B cell | 5.04e-34 | 2 |
small pre-B-II cell | 5.04e-34 | 2 |
immature B cell | 5.04e-34 | 2 |
precursor B cell | 3.27e-23 | 3 |
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.38e-27 | 10 |