FFCP PHASE1:Hg19::chr7:29603521..29603533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222171 | |EntrezGene=222171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |HGNC=22310 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |UniProt=Q8IV56,A4D1A1 | ||
|association_with_transcript=94bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |association_with_transcript=94bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | ||
|cluster_id=chr7:29603521..29603533,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_4_at_PRR15_5end | |description=CAGE_peak_4_at_PRR15_5end | ||
|id=chr7:29603521..29603533,+ | |id=chr7:29603521..29603533,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-12!254 | |ontology_enrichment_celltype=CL:0000066!1.29e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.58e-27;19!CL:0002577;3.86e-15;3!CL:0002541;1.87e-14;3!CL:0002536;1.06e-10;2!CL:0002554;1.09e-09;2!CL:0002537;1.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.26e-27,19;CL:0002577,3.87e-15,3;CL:0002541,1.34e-14,3;CL:0002536,1.06e-10,2;CL:0002554,6.02e-10,2;CL:0002537,1.86e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.56e-14!106;DOID:299!5.02e-10!25;DOID:0050687!1.70e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:299;4.63e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,5.08e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.47e-14!14;UBERON:0000158!2.47e-14!14;UBERON:0003124!7.06e-11!7;UBERON:0009569!3.07e-10!113;UBERON:0000077!6.50e-10!130;UBERON:0000466!7.32e-10!126;UBERON:0004119!1.68e-09!169;UBERON:0000925!1.68e-09!169;UBERON:0006595!1.68e-09!169;UBERON:0004921!5.62e-09!129;UBERON:0004185!5.62e-09!129;UBERON:0001007!2.01e-08!155;UBERON:0001555!2.01e-08!155;UBERON:0007026!2.01e-08!155;UBERON:0005177!2.66e-08!107;UBERON:0000478!7.59e-08!24;UBERON:0000464!9.97e-08!104;UBERON:0003100!2.60e-07!41;UBERON:0003064!5.00e-07!37;UBERON:0002100!7.22e-07!216;UBERON:0001987!7.40e-07!4;UBERON:0004340!7.40e-07!4;UBERON:0003886!7.48e-07!63 | |ontology_enrichment_uberon=UBERON:0005631!2.47e-14!14;UBERON:0000158!2.47e-14!14;UBERON:0003124!7.06e-11!7;UBERON:0009569!3.07e-10!113;UBERON:0000077!6.50e-10!130;UBERON:0000466!7.32e-10!126;UBERON:0004119!1.68e-09!169;UBERON:0000925!1.68e-09!169;UBERON:0006595!1.68e-09!169;UBERON:0004921!5.62e-09!129;UBERON:0004185!5.62e-09!129;UBERON:0001007!2.01e-08!155;UBERON:0001555!2.01e-08!155;UBERON:0007026!2.01e-08!155;UBERON:0005177!2.66e-08!107;UBERON:0000478!7.59e-08!24;UBERON:0000464!9.97e-08!104;UBERON:0003100!2.60e-07!41;UBERON:0003064!5.00e-07!37;UBERON:0002100!7.22e-07!216;UBERON:0001987!7.40e-07!4;UBERON:0004340!7.40e-07!4;UBERON:0003886!7.48e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.19e-28;10!UBERON:0000158;4.19e-28;10!UBERON:0000478;3.90e-21;24!UBERON:0000305;3.46e-16;7!UBERON:0003124;1.87e-14;3!UBERON:0000920;1.87e-14;3!UBERON:0001987;1.82e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.50e-38,14;UBERON:0000158,5.50e-38,14;UBERON:0003124,7.03e-24,7;UBERON:0000478,3.51e-21,24;UBERON:0000305,3.70e-16,7;UBERON:0000920,1.34e-14,3;UBERON:0004871,4.19e-14,8;UBERON:0001987,1.83e-11,4;UBERON:0004340,1.83e-11,4;UBERON:0004923,1.80e-07,66;UBERON:0002110,8.80e-07,3;UBERON:0006242,8.80e-07,3 | |||
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| ||
|short_description=p4@PRR15 | |short_description=p4@PRR15 | ||
}} | }} |
Latest revision as of 04:32, 18 September 2015
Short description: | p4@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRR15_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 94bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.26e-27 | 19 |
placental epithelial cell | 3.87e-15 | 3 |
chorionic membrane mesenchymal stem cell | 1.34e-14 | 3 |
amniotic epithelial cell | 1.06e-10 | 2 |
fibroblast of lymphatic vessel | 6.02e-10 | 2 |
amnion mesenchymal stem cell | 1.86e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.50e-38 | 14 |
membranous layer | 5.50e-38 | 14 |
chorion | 7.03e-24 | 7 |
extraembryonic structure | 3.51e-21 | 24 |
amnion | 3.70e-16 | 7 |
egg chorion | 1.34e-14 | 3 |
somatic layer of lateral plate mesoderm | 4.19e-14 | 8 |
placenta | 1.83e-11 | 4 |
allantois | 1.83e-11 | 4 |
organ component layer | 1.80e-07 | 66 |
gallbladder | 8.80e-07 | 3 |
gall bladder primordium | 8.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.08e-08 | 25 |