FFCP PHASE1:Hg19::chr8:22437713..22437748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64236 | |EntrezGene=64236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13992 | |HGNC=13992 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0X3,C9K0F0 | |UniProt=C9J0X3,C9K0F0 | ||
|association_with_transcript=0bp_to_ENST00000426493,ENST00000429812_5end | |association_with_transcript=0bp_to_ENST00000426493,ENST00000429812_5end | ||
|cluster_id=chr8:22437713..22437748,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_PDLIM2_5end | |description=CAGE_peak_5_at_PDLIM2_5end | ||
|id=chr8:22437713..22437748,+ | |id=chr8:22437713..22437748,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.68e-30!172;CL:0000566!9.68e-30!172;CL:0000988!2.44e-26!182;CL:0002032!2.82e-26!165;CL:0000837!2.82e-26!165;CL:0000838!3.00e-24!52;CL:0000738!1.07e-23!140;CL:0000542!1.69e-23!53;CL:0000051!1.69e-23!53;CL:0000084!5.82e-23!25;CL:0000827!5.82e-23!25;CL:0002087!8.91e-20!119;CL:0000791!1.23e-19!18;CL:0000789!1.23e-19!18;CL:0002420!1.23e-19!18;CL:0002419!1.23e-19!18;CL:0000790!1.23e-19!18;CL:0002031!1.24e-19!124;CL:0000625!1.42e-12!11;CL:0000763!6.50e-08!112;CL:0000049!6.50e-08!112;CL:0000624!9.22e-08!6 | |ontology_enrichment_celltype=CL:0000037!9.68e-30!172;CL:0000566!9.68e-30!172;CL:0000988!2.44e-26!182;CL:0002032!2.82e-26!165;CL:0000837!2.82e-26!165;CL:0000838!3.00e-24!52;CL:0000738!1.07e-23!140;CL:0000542!1.69e-23!53;CL:0000051!1.69e-23!53;CL:0000084!5.82e-23!25;CL:0000827!5.82e-23!25;CL:0002087!8.91e-20!119;CL:0000791!1.23e-19!18;CL:0000789!1.23e-19!18;CL:0002420!1.23e-19!18;CL:0002419!1.23e-19!18;CL:0000790!1.23e-19!18;CL:0002031!1.24e-19!124;CL:0000625!1.42e-12!11;CL:0000763!6.50e-08!112;CL:0000049!6.50e-08!112;CL:0000624!9.22e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.05e-40;18!CL:0000789;1.05e-40;18!CL:0002419;1.05e-40;18!CL:0000084;8.35e-39;25!CL:0000625;2.21e-25;11!CL:0000624;5.58e-15;6!CL:0000542;2.46e-12;53!CL:0000898;1.18e-08;3!CL:0000226;3.07e-07;3!CL:0000842;3.07e-07;3!CL:0000623;4.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.72e-41,18;CL:0000789,6.72e-41,18;CL:0002420,6.72e-41,18;CL:0002419,6.72e-41,18;CL:0000790,6.72e-41,18;CL:0000084,6.82e-39,25;CL:0000827,6.82e-39,25;CL:0000625,1.79e-25,11;CL:0000838,1.64e-22,52;CL:0000542,5.96e-22,53;CL:0000051,5.96e-22,53;CL:0000037,2.03e-20,168;CL:0000988,9.79e-19,177;CL:0002032,2.57e-17,161;CL:0000837,2.57e-17,161;CL:0000624,5.07e-15,6;CL:0000738,1.02e-12,136;CL:0002087,2.35e-10,115;CL:0002031,8.15e-09,120;CL:0000898,1.00e-08,3;CL:0000226,2.80e-07,3;CL:0000842,2.80e-07,3;CL:0000623,3.07e-07,3;CL:0000825,3.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.05e-40;18!CL:0000051;2.46e-12;53 | |||
|ontology_enrichment_disease=DOID:1240!6.15e-11!39;DOID:2531!1.32e-10!51;DOID:0060083!1.32e-10!51;DOID:8692!3.61e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.84e-10;39!DOID:2531;7.97e-09;51!DOID:0060083;7.97e-09;51!DOID:8692;9.64e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.53e-13,39;DOID:2531,1.95e-11,51;DOID:0060083,1.95e-11,51;DOID:8692,2.18e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.51e-08!102;UBERON:0003061!3.51e-08!102;UBERON:0000178!1.42e-07!15;UBERON:0000179!1.42e-07!15;UBERON:0000463!1.42e-07!15;UBERON:0002193!1.85e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!3.51e-08!102;UBERON:0003061!3.51e-08!102;UBERON:0000178!1.42e-07!15;UBERON:0000179!1.42e-07!15;UBERON:0000463!1.42e-07!15;UBERON:0002193!1.85e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-16;15!UBERON:0000179;1.90e-16;15!UBERON:0000463;1.90e-16;15!UBERON:0002390;1.15e-11;32!UBERON:0004177;2.66e-07;5!UBERON:0005057;2.66e-07;5!UBERON:0002193;3.17e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.62e-16,15;UBERON:0000179,1.62e-16,15;UBERON:0000463,1.62e-16,15;UBERON:0004177,1.65e-11,7;UBERON:0005057,1.65e-11,7;UBERON:0002370,6.70e-10,4;UBERON:0005058,6.70e-10,4;UBERON:0009113,6.70e-10,4;UBERON:0003295,6.70e-10,4;UBERON:0005562,6.70e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.57470412614962,0.314843125254717,2.36018566109342,1.15148819429164,0.309632246632152,0.919421224478927,0.90361775633475,0.369754010166788,1.00707360754392,0.284338464974843,0.293600439334847,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.515151135268373,0,0.377875943688809,0,0.464858073811369,0,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0.211255286311942,0,0,0.22465726229299,0,0.48217676009124,1.14005097496499,0.79566670879636,1.0959849225878,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,0,0.526768169550154,3.34406609193516,5.10913991573914,3.28962398399215,10.1983762188314,5.86660079940463,7.57516489175573,21.4309401248702,9.91553066278045,7.9543595018206,7.75368631042674,10.0197429593056,6.40456598628376,9.10415432919148,6.24864037493969,6.90875044464621,8.11448640058147,7.1177550317789,7.49114318651197,8.36284190439814,7.81834464613207,7.66440987203842,5.49803912772208,4.80737414837055,7.96413535810242,6.51083453856419,4.75226022224187,5.27012916772205,6.39933055772092,4.99722906209383,5.6826540490564,4.10563998460523,3.42731463482045,2.40696176205157,2.31719046212478,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82926198829301,0,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0.425325291727159,0,0,0.383382679165211,0,0.616339038092582,0.829312462163088,2.73827911492227,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,2.91421374383171,1.97030760201927,1.50939302401662,2.95188983443421,0,0,0,0,0,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,2.48121631347465,1.50999940573032,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.01090682660736,0,0.188287601553558,0,0,0,0,1.52234282769651,5.35246044999663,3.41788312304498,3.09701308095126,1.64544909234478,5.83625980073446,3.24018862342869,3.17250070517708,0,0,0,0,0.144269212976445,0.853702120180969,2.07254154547469,0,4.5961288831768,5.71518673354484,0,3.08876895924805,0,2.0368386450493,5.01268954180134,2.20079311142084,0.1605880751037,0.201799707191048,0,1.03051603426729,0.307240764308458,0.447352215784832,0.166849141711909,2.9308214310306,0,0,3.2454681417118,1.33228787199128,0,0,0,0,9.69557443214062,0,0,0,0,0,0,0,0,0,0.19924798825107,2.21027132424918,0,0,0,0,0.808815160325942,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.552896299656123,0.886642856860642,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0,0,0,0,5.10966490978682,1.8837630767403,1.49590513710141,0,0,0,0,1.58936578980379,0.210998064528027,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.789168805698781,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,0,0.39997479170986,3.84090226898907,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,2.12748913591143,0.444925607568277,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,1.07965256976767,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,2.6315497034359,1.28915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| ||
|short_description=p5@PDLIM2 | |short_description=p5@PDLIM2 | ||
}} | }} |
Latest revision as of 11:53, 17 September 2015
Short description: | p5@PDLIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDLIM2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000426493, ENST00000429812_5end |
EntrezGene: | PDLIM2 |
HGNC: | 13992 |
UniProt: | C9J0X3C9K0F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.72e-41 | 18 |
alpha-beta T cell | 6.72e-41 | 18 |
immature T cell | 6.72e-41 | 18 |
mature T cell | 6.72e-41 | 18 |
immature alpha-beta T cell | 6.72e-41 | 18 |
T cell | 6.82e-39 | 25 |
pro-T cell | 6.82e-39 | 25 |
CD8-positive, alpha-beta T cell | 1.79e-25 | 11 |
lymphoid lineage restricted progenitor cell | 1.64e-22 | 52 |
lymphocyte | 5.96e-22 | 53 |
common lymphoid progenitor | 5.96e-22 | 53 |
hematopoietic stem cell | 2.03e-20 | 168 |
hematopoietic cell | 9.79e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.57e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-17 | 161 |
CD4-positive, alpha-beta T cell | 5.07e-15 | 6 |
leukocyte | 1.02e-12 | 136 |
nongranular leukocyte | 2.35e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 8.15e-09 | 120 |
naive T cell | 1.00e-08 | 3 |
single nucleate cell | 2.80e-07 | 3 |
mononuclear cell | 2.80e-07 | 3 |
natural killer cell | 3.07e-07 | 3 |
pro-NK cell | 3.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.62e-16 | 15 |
haemolymphatic fluid | 1.62e-16 | 15 |
organism substance | 1.62e-16 | 15 |
hemopoietic organ | 1.65e-11 | 7 |
immune organ | 1.65e-11 | 7 |
thymus | 6.70e-10 | 4 |
hemolymphoid system gland | 6.70e-10 | 4 |
thymic region | 6.70e-10 | 4 |
pharyngeal gland | 6.70e-10 | 4 |
thymus primordium | 6.70e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.53e-13 | 39 |
hematologic cancer | 1.95e-11 | 51 |
immune system cancer | 1.95e-11 | 51 |
myeloid leukemia | 2.18e-09 | 31 |