FFCP PHASE1:Hg19::chr9:12695764..12695782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQI3 | |UniProt=E7EQI3 | ||
|association_with_transcript=44bp_to_ENST00000381136_5end | |association_with_transcript=44bp_to_ENST00000381136_5end | ||
|cluster_id=chr9:12695764..12695782,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_7_at_TYRP1_5end | |description=CAGE_peak_7_at_TYRP1_5end | ||
|id=chr9:12695764..12695782,+ | |id=chr9:12695764..12695782,+ | ||
|ontology_enrichment_celltype=CL:0000148!3.62e-12!10;CL:0000541!3.62e-12!10;CL:0000147!1.04e-10!14;CL:0002567!1.19e-08!3 | |ontology_enrichment_celltype=CL:0000148!3.62e-12!10;CL:0000541!3.62e-12!10;CL:0000147!1.04e-10!14;CL:0002567!1.19e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.62e-32;10!CL:0000147;1.37e-29;14!CL:0002567;5.49e-21;3!CL:0000710;7.72e-16;20!CL:0002195;6.41e-14;2!CL:0002571;6.41e-14;2!CL:0000075;1.68e-11;27!CL:0002566;4.07e-08;1!CL:0002077;4.89e-08;34!CL:0000149;1.70e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.62e-32,10;CL:0000541,1.62e-32,10;CL:0000147,1.37e-29,14;CL:0002567,5.31e-21,3;CL:0000710,7.73e-16,20;CL:0002195,5.44e-14,2;CL:0002571,5.44e-14,2;CL:0000075,1.68e-11,27;CL:0002077,5.99e-09,34;CL:0002566,4.07e-08,1;CL:0000149,1.70e-07,4;CL:0000333,6.89e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.78e-15;4!UBERON:0007284;6.78e-15;4!UBERON:0000358;5.90e-08;1!UBERON:0010226;7.21e-08;1!UBERON:0010227;9.72e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.22e-14;2!DOID:3371;7.21e-08;1!DOID:4549;7.21e-08;1!DOID:5861;7.21e-08;1!DOID:6496;7.21e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.18e-14,2;DOID:3371,7.45e-08,1;DOID:4549,7.45e-08,1;DOID:5861,7.45e-08,1;DOID:6496,7.45e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-16!115;UBERON:0007100!6.58e-10!27;UBERON:0003978!3.18e-08!3;UBERON:0009751!3.18e-08!3;UBERON:0000946!3.18e-08!3;UBERON:0002523!3.18e-08!3;UBERON:0005983!3.18e-08!3;UBERON:0002165!3.18e-08!3;UBERON:0002062!3.18e-08!3;UBERON:0007280!3.18e-08!3;UBERON:0004151!3.34e-08!3;UBERON:0001896!6.35e-07!3;UBERON:0005290!6.35e-07!3;UBERON:0010096!6.35e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-16!115;UBERON:0007100!6.58e-10!27;UBERON:0003978!3.18e-08!3;UBERON:0009751!3.18e-08!3;UBERON:0000946!3.18e-08!3;UBERON:0002523!3.18e-08!3;UBERON:0005983!3.18e-08!3;UBERON:0002165!3.18e-08!3;UBERON:0002062!3.18e-08!3;UBERON:0007280!3.18e-08!3;UBERON:0004151!3.34e-08!3;UBERON:0001896!6.35e-07!3;UBERON:0005290!6.35e-07!3;UBERON:0010096!6.35e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;9.90e-20;3!UBERON:0003978;1.16e-19;3!UBERON:0000946;1.16e-19;3!UBERON:0002081;1.35e-13;2!UBERON:0002133;2.12e-13;2!UBERON:0007100;9.19e-12;25!UBERON:0002146;5.33e-08;1!UBERON:0005623;5.33e-08;1!UBERON:0002084;7.21e-08;1!UBERON:0002082;7.21e-08;1!UBERON:0002079;9.72e-08;1!UBERON:0002135;1.54e-07;1!UBERON:0002134;1.54e-07;1!UBERON:0007195;1.54e-07;1!UBERON:0005208;1.54e-07;1!UBERON:0004145;1.54e-07;1!UBERON:0005946;1.54e-07;1!UBERON:0005965;1.54e-07;1!UBERON:0002078;1.54e-07;1!UBERON:0000948;4.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.90e-20,3;UBERON:0009751,7.90e-20,3;UBERON:0000946,7.90e-20,3;UBERON:0002523,7.90e-20,3;UBERON:0005983,7.90e-20,3;UBERON:0002165,7.90e-20,3;UBERON:0002062,7.90e-20,3;UBERON:0007280,7.90e-20,3;UBERON:0004151,8.99e-20,3;UBERON:0002081,1.35e-13,2;UBERON:0010227,1.35e-13,2;UBERON:0002133,1.44e-13,2;UBERON:0007100,7.28e-11,27;UBERON:0004797,8.38e-09,7;UBERON:0002146,5.33e-08,1;UBERON:0005623,5.33e-08,1;UBERON:0002084,6.52e-08,1;UBERON:0002082,6.52e-08,1;UBERON:0010226,6.52e-08,1;UBERON:0002079,1.11e-07,1;UBERON:0002135,1.18e-07,1;UBERON:0002134,1.35e-07,1;UBERON:0005208,1.35e-07,1;UBERON:0005946,1.35e-07,1;UBERON:0005965,1.35e-07,1;UBERON:0002078,1.35e-07,1;UBERON:0007195,1.75e-07,1 | |||
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| ||
|short_description=p7@TYRP1 | |short_description=p7@TYRP1 | ||
}} | }} |
Latest revision as of 23:43, 24 September 2015
Short description: | p7@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 44bp_to_ENST00000381136_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | E7EQI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.62e-32 | 10 |
melanoblast | 1.62e-32 | 10 |
pigment cell | 1.37e-29 | 14 |
light melanocyte | 5.31e-21 | 3 |
neurecto-epithelial cell | 7.73e-16 | 20 |
hepatic stem cell | 5.44e-14 | 2 |
hepatic mesenchymal stem cell | 5.44e-14 | 2 |
columnar/cuboidal epithelial cell | 1.68e-11 | 27 |
ecto-epithelial cell | 5.99e-09 | 34 |
dark melanocyte | 4.07e-08 | 1 |
visual pigment cell | 1.70e-07 | 4 |
migratory neural crest cell | 6.89e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
valve | 7.90e-20 | 3 |
cardiac mesenchyme | 7.90e-20 | 3 |
cardial valve | 7.90e-20 | 3 |
tunica intima | 7.90e-20 | 3 |
heart layer | 7.90e-20 | 3 |
endocardium | 7.90e-20 | 3 |
endocardial cushion | 7.90e-20 | 3 |
presumptive endocardium | 7.90e-20 | 3 |
cardiac chamber | 8.99e-20 | 3 |
cardiac atrium | 1.35e-13 | 2 |
future cardiac atrium | 1.35e-13 | 2 |
atrioventricular valve | 1.44e-13 | 2 |
primary circulatory organ | 7.28e-11 | 27 |
blood vessel layer | 8.38e-09 | 7 |
pulmonary valve | 5.33e-08 | 1 |
semi-lunar valve | 5.33e-08 | 1 |
heart left ventricle | 6.52e-08 | 1 |
cardiac ventricle | 6.52e-08 | 1 |
future cardiac ventricle | 6.52e-08 | 1 |
left cardiac atrium | 1.11e-07 | 1 |
mitral valve | 1.18e-07 | 1 |
tricuspid valve | 1.35e-07 | 1 |
right atrium valve | 1.35e-07 | 1 |
outflow tract of atrium | 1.35e-07 | 1 |
outflow part of right atrium | 1.35e-07 | 1 |
right cardiac atrium | 1.35e-07 | 1 |
stroma of bone marrow | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.18e-14 | 2 |
chondrosarcoma | 7.45e-08 | 1 |
extraosseous chondrosarcoma | 7.45e-08 | 1 |
myxoid chondrosarcoma | 7.45e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 7.45e-08 | 1 |