FFCP PHASE1:Hg19::chr9:130477912..130477961,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=138428 | |EntrezGene=138428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27039 | |HGNC=27039 | ||
|TSSclassifier=strong | |||
|UniProt=Q86Y79 | |UniProt=Q86Y79 | ||
|association_with_transcript=0bp_to_ENST00000335223,ENST00000416214,ENST00000543175,NM_001002913,uc004brm.2_5end | |association_with_transcript=0bp_to_ENST00000335223,ENST00000416214,ENST00000543175,NM_001002913,uc004brm.2_5end | ||
|cluster_id=chr9:130477912..130477961,- | |||
|coexpression_cluster_id=C1636 | |||
|description=CAGE_peak_1_at_PTRH1_5end | |description=CAGE_peak_1_at_PTRH1_5end | ||
|id=chr9:130477912..130477961,- | |id=chr9:130477912..130477961,- | ||
|ontology_enrichment_celltype=CL:0000220!1.14e-26!246;CL:0002321!3.32e-26!248;CL:0000222!4.07e-21!119;CL:0000066!6.17e-18!254;CL:0000183!1.18e-13!59;CL:0000680!7.25e-12!57;CL:0000056!7.25e-12!57;CL:0000355!7.25e-12!57;CL:0000055!1.93e-11!180;CL:0000187!2.77e-11!54;CL:0002078!6.01e-11!44;CL:0000115!6.70e-11!35;CL:0000192!1.37e-10!42;CL:0000514!1.37e-10!42;CL:0000012!1.78e-10!682;CL:0000548!1.90e-10!679;CL:0000004!1.90e-10!679;CL:0000255!1.90e-10!679;CL:0000393!3.32e-09!60;CL:0000211!3.32e-09!60;CL:0000359!3.48e-09!32;CL:0000213!7.42e-09!57;CL:0000215!7.42e-09!57;CL:0002371!8.47e-09!591;CL:1000449!1.14e-08!16;CL:0000144!1.84e-08!625;CL:0000076!5.77e-08!62;CL:0002139!8.33e-08!24;CL:0002681!2.25e-07!13;CL:0002584!2.25e-07!13;CL:0000071!3.41e-07!18;CL:0002546!3.41e-07!18 | |ontology_enrichment_celltype=CL:0000220!1.14e-26!246;CL:0002321!3.32e-26!248;CL:0000222!4.07e-21!119;CL:0000066!6.17e-18!254;CL:0000183!1.18e-13!59;CL:0000680!7.25e-12!57;CL:0000056!7.25e-12!57;CL:0000355!7.25e-12!57;CL:0000055!1.93e-11!180;CL:0000187!2.77e-11!54;CL:0002078!6.01e-11!44;CL:0000115!6.70e-11!35;CL:0000192!1.37e-10!42;CL:0000514!1.37e-10!42;CL:0000012!1.78e-10!682;CL:0000548!1.90e-10!679;CL:0000004!1.90e-10!679;CL:0000255!1.90e-10!679;CL:0000393!3.32e-09!60;CL:0000211!3.32e-09!60;CL:0000359!3.48e-09!32;CL:0000213!7.42e-09!57;CL:0000215!7.42e-09!57;CL:0002371!8.47e-09!591;CL:1000449!1.14e-08!16;CL:0000144!1.84e-08!625;CL:0000076!5.77e-08!62;CL:0002139!8.33e-08!24;CL:0002681!2.25e-07!13;CL:0002584!2.25e-07!13;CL:0000071!3.41e-07!18;CL:0002546!3.41e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.46e-09;36!CL:1000449;1.03e-08;15!CL:0000359;1.10e-08;32!CL:0000192;6.90e-08;43!CL:0002078;8.78e-08;45!CL:0002139;9.09e-08;24!CL:0002681;2.34e-07;12!CL:0002584;2.34e-07;12!CL:0000187;2.54e-07;55!CL:0000071;3.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.61e-27,250;CL:0000222,8.36e-22,121;CL:0000066,9.65e-18,253;CL:0000680,4.83e-12,58;CL:0000056,4.83e-12,58;CL:0000355,4.83e-12,58;CL:0000187,1.85e-11,55;CL:0002078,1.98e-11,45;CL:0000115,2.09e-11,36;CL:0000192,9.30e-11,43;CL:0000514,9.30e-11,43;CL:0000393,2.23e-09,61;CL:0000211,2.23e-09,61;CL:0000213,2.84e-09,58;CL:0000215,2.84e-09,58;CL:0000359,3.47e-09,32;CL:1000449,1.40e-08,15;CL:0000076,4.96e-08,63;CL:0002139,8.32e-08,24;CL:0002681,2.74e-07,12;CL:0002584,2.74e-07,12;CL:0000071,3.40e-07,18;CL:0002546,3.40e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;6.90e-08;43!CL:0002546;3.42e-07;18!CL:0000355;7.54e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.92e-18!118;UBERON:0000119!2.67e-16!312;UBERON:0000483!2.96e-16!309;UBERON:0000055!3.38e-16!69;UBERON:0002049!3.02e-15!79;UBERON:0007798!3.02e-15!79;UBERON:0004872!4.35e-15!84;UBERON:0001981!5.15e-15!60;UBERON:0007500!5.15e-15!60;UBERON:0004537!5.15e-15!60;UBERON:0006965!5.15e-15!60;UBERON:0005256!5.43e-15!143;UBERON:0000486!2.06e-14!82;UBERON:0000490!4.01e-14!138;UBERON:0000914!7.39e-13!83;UBERON:0002329!7.39e-13!83;UBERON:0003077!7.39e-13!83;UBERON:0003059!7.39e-13!83;UBERON:0007282!7.39e-13!83;UBERON:0009618!7.39e-13!83;UBERON:0007285!7.39e-13!83;UBERON:0004290!8.51e-13!70;UBERON:0001637!8.67e-13!42;UBERON:0003509!8.67e-13!42;UBERON:0004572!8.67e-13!42;UBERON:0003104!1.44e-12!238;UBERON:0009142!1.44e-12!238;UBERON:0002100!1.45e-12!216;UBERON:0001009!2.17e-11!113;UBERON:0004535!2.79e-11!110;UBERON:0000481!1.17e-10!347;UBERON:0001134!3.59e-10!61;UBERON:0002036!3.59e-10!61;UBERON:0003082!3.59e-10!61;UBERON:0004573!5.83e-10!33;UBERON:0004571!5.83e-10!33;UBERON:0000477!2.26e-09!286;UBERON:0002385!3.73e-09!63;UBERON:0001015!3.73e-09!63;UBERON:0000383!3.73e-09!63;UBERON:0000475!9.54e-09!365;UBERON:0004211!1.14e-08!16;UBERON:0001285!1.14e-08!16;UBERON:0007684!1.14e-08!16;UBERON:0003220!1.14e-08!16;UBERON:0004208!1.14e-08!16;UBERON:0006555!2.26e-08!17;UBERON:0005103!2.26e-08!17;UBERON:0000083!2.26e-08!17;UBERON:0009201!2.26e-08!17;UBERON:0004819!2.26e-08!17;UBERON:0006553!2.26e-08!17;UBERON:0003074!2.26e-08!17;UBERON:0003060!2.26e-08!17;UBERON:0004111!2.69e-08!241;UBERON:0000353!4.97e-08!17;UBERON:0000080!1.15e-07!18;UBERON:0002120!1.15e-07!18;UBERON:0004875!1.15e-07!18;UBERON:0005721!1.15e-07!18;UBERON:0005754!1.15e-07!18;UBERON:0007297!1.15e-07!18;UBERON:0003103!1.96e-07!69;UBERON:0000025!2.21e-07!194;UBERON:0001225!2.25e-07!13;UBERON:0008987!2.25e-07!13;UBERON:0001986!3.41e-07!18;UBERON:0004638!3.41e-07!18;UBERON:0004852!3.41e-07!18;UBERON:0006554!8.53e-07!44 | |ontology_enrichment_uberon=UBERON:0003914!2.92e-18!118;UBERON:0000119!2.67e-16!312;UBERON:0000483!2.96e-16!309;UBERON:0000055!3.38e-16!69;UBERON:0002049!3.02e-15!79;UBERON:0007798!3.02e-15!79;UBERON:0004872!4.35e-15!84;UBERON:0001981!5.15e-15!60;UBERON:0007500!5.15e-15!60;UBERON:0004537!5.15e-15!60;UBERON:0006965!5.15e-15!60;UBERON:0005256!5.43e-15!143;UBERON:0000486!2.06e-14!82;UBERON:0000490!4.01e-14!138;UBERON:0000914!7.39e-13!83;UBERON:0002329!7.39e-13!83;UBERON:0003077!7.39e-13!83;UBERON:0003059!7.39e-13!83;UBERON:0007282!7.39e-13!83;UBERON:0009618!7.39e-13!83;UBERON:0007285!7.39e-13!83;UBERON:0004290!8.51e-13!70;UBERON:0001637!8.67e-13!42;UBERON:0003509!8.67e-13!42;UBERON:0004572!8.67e-13!42;UBERON:0003104!1.44e-12!238;UBERON:0009142!1.44e-12!238;UBERON:0002100!1.45e-12!216;UBERON:0001009!2.17e-11!113;UBERON:0004535!2.79e-11!110;UBERON:0000481!1.17e-10!347;UBERON:0001134!3.59e-10!61;UBERON:0002036!3.59e-10!61;UBERON:0003082!3.59e-10!61;UBERON:0004573!5.83e-10!33;UBERON:0004571!5.83e-10!33;UBERON:0000477!2.26e-09!286;UBERON:0002385!3.73e-09!63;UBERON:0001015!3.73e-09!63;UBERON:0000383!3.73e-09!63;UBERON:0000475!9.54e-09!365;UBERON:0004211!1.14e-08!16;UBERON:0001285!1.14e-08!16;UBERON:0007684!1.14e-08!16;UBERON:0003220!1.14e-08!16;UBERON:0004208!1.14e-08!16;UBERON:0006555!2.26e-08!17;UBERON:0005103!2.26e-08!17;UBERON:0000083!2.26e-08!17;UBERON:0009201!2.26e-08!17;UBERON:0004819!2.26e-08!17;UBERON:0006553!2.26e-08!17;UBERON:0003074!2.26e-08!17;UBERON:0003060!2.26e-08!17;UBERON:0004111!2.69e-08!241;UBERON:0000353!4.97e-08!17;UBERON:0000080!1.15e-07!18;UBERON:0002120!1.15e-07!18;UBERON:0004875!1.15e-07!18;UBERON:0005721!1.15e-07!18;UBERON:0005754!1.15e-07!18;UBERON:0007297!1.15e-07!18;UBERON:0003103!1.96e-07!69;UBERON:0000025!2.21e-07!194;UBERON:0001225!2.25e-07!13;UBERON:0008987!2.25e-07!13;UBERON:0001986!3.41e-07!18;UBERON:0004638!3.41e-07!18;UBERON:0004852!3.41e-07!18;UBERON:0006554!8.53e-07!44 | ||
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| ||
|short_description=p1@PTRH1 | |short_description=p1@PTRH1 | ||
}} | }} |
Latest revision as of 04:54, 25 September 2015
Short description: | p1@PTRH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTRH1_5end |
Coexpression cluster: | C1636_Mesenchymal_Alveolar_Placental_Smooth_Fibroblast_Bronchial_Hair |
Association with transcript: | 0bp_to_ENST00000335223, ENST00000416214, ENST00000543175, NM_001002913, uc004brm.2_5end |
EntrezGene: | PTRH1 |
HGNC: | 27039 |
UniProt: | Q86Y79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.61e-27 | 250 |
mesodermal cell | 8.36e-22 | 121 |
epithelial cell | 9.65e-18 | 253 |
muscle precursor cell | 4.83e-12 | 58 |
myoblast | 4.83e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.83e-12 | 58 |
muscle cell | 1.85e-11 | 55 |
meso-epithelial cell | 1.98e-11 | 45 |
endothelial cell | 2.09e-11 | 36 |
smooth muscle cell | 9.30e-11 | 43 |
smooth muscle myoblast | 9.30e-11 | 43 |
electrically responsive cell | 2.23e-09 | 61 |
electrically active cell | 2.23e-09 | 61 |
lining cell | 2.84e-09 | 58 |
barrier cell | 2.84e-09 | 58 |
vascular associated smooth muscle cell | 3.47e-09 | 32 |
epithelial cell of nephron | 1.40e-08 | 15 |
squamous epithelial cell | 4.96e-08 | 63 |
endothelial cell of vascular tree | 8.32e-08 | 24 |
kidney cortical cell | 2.74e-07 | 12 |
renal cortical epithelial cell | 2.74e-07 | 12 |
blood vessel endothelial cell | 3.40e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.40e-07 | 18 |