FFCP PHASE1:Hg19::chr9:139637387..139637397,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=414332 | |EntrezGene=414332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20892 | |HGNC=20892 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRR3 | |UniProt=E9PRR3 | ||
|association_with_transcript=0bp_to_ENST00000341040_5end | |association_with_transcript=0bp_to_ENST00000341040_5end | ||
|cluster_id=chr9:139637387..139637397,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_4_at_LCN10_5end | |description=CAGE_peak_4_at_LCN10_5end | ||
|id=chr9:139637387..139637397,- | |id=chr9:139637387..139637397,- | ||
|ontology_enrichment_celltype=CL:0000236!7.02e-23!14;CL:0000945!1.27e-12!24;CL:0000826!1.27e-12!24 | |ontology_enrichment_celltype=CL:0000236!7.02e-23!14;CL:0000945!1.27e-12!24;CL:0000826!1.27e-12!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.90e-16;13!CL:0002535;3.06e-12;2!CL:0000945;5.43e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.37e-15,14;CL:0002535,2.90e-12,2;CL:0000945,5.58e-09,24;CL:0000826,5.58e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.55e-18;5!UBERON:0007297;1.48e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.68e-09!11;UBERON:0000341!5.70e-09!2;UBERON:0007023!6.03e-08!115;UBERON:0004907!9.82e-08!5;UBERON:0006947!8.36e-07!3;UBERON:0004054!8.36e-07!3 | |ontology_enrichment_uberon=UBERON:0003135!2.68e-09!11;UBERON:0000341!5.70e-09!2;UBERON:0007023!6.03e-08!115;UBERON:0004907!9.82e-08!5;UBERON:0006947!8.36e-07!3;UBERON:0004054!8.36e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.48e-30;3!UBERON:0004054;2.48e-30;3!UBERON:0001301;1.07e-23;1!UBERON:0001000;4.59e-23;1!UBERON:0005352;4.59e-23;1!UBERON:0005904;4.86e-23;4!UBERON:0002046;1.55e-18;5!UBERON:0006955;3.06e-12;2!UBERON:0004801;3.06e-12;2!UBERON:0004175;4.17e-10;21!UBERON:0000058;7.91e-10;10!UBERON:0003135;5.10e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.98e-30,3;UBERON:0004054,1.98e-30,3;UBERON:0001301,1.07e-23,1;UBERON:0001000,3.28e-23,1;UBERON:0005352,3.28e-23,1;UBERON:0005904,4.11e-23,4;UBERON:0002046,1.62e-18,5;UBERON:0004117,1.62e-18,5;UBERON:0007689,1.62e-18,5;UBERON:0007123,1.62e-18,5;UBERON:0003091,1.62e-18,5;UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0003135,4.80e-09,11;UBERON:0009722,5.87e-09,11;UBERON:0007690,5.87e-09,11;UBERON:0004175,1.30e-08,25 | |||
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| ||
|short_description=p4@LCN10 | |short_description=p4@LCN10 | ||
}} | }} |
Latest revision as of 13:04, 16 September 2015
Short description: | p4@LCN10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCN10_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_ENST00000341040_5end |
EntrezGene: | LCN10 |
HGNC: | 20892 |
UniProt: | E9PRR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.37e-15 | 14 |
epithelial cell of cervix | 2.90e-12 | 2 |
lymphocyte of B lineage | 5.58e-09 | 24 |
pro-B cell | 5.58e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.98e-30 | 3 |
internal male genitalia | 1.98e-30 | 3 |
epididymis | 1.07e-23 | 1 |
vas deferens | 3.28e-23 | 1 |
spermatic cord | 3.28e-23 | 1 |
duct of male reproductive system | 4.11e-23 | 4 |
thyroid gland | 1.62e-18 | 5 |
pharyngeal pouch | 1.62e-18 | 5 |
thyroid diverticulum | 1.62e-18 | 5 |
pharyngeal pouch 2 | 1.62e-18 | 5 |
thyroid primordium | 1.62e-18 | 5 |
uterine epithelium | 2.90e-12 | 2 |
cervix epithelium | 2.90e-12 | 2 |
male reproductive organ | 4.80e-09 | 11 |
entire pharyngeal arch endoderm | 5.87e-09 | 11 |
early pharyngeal endoderm | 5.87e-09 | 11 |
internal genitalia | 1.30e-08 | 25 |