FFCP PHASE1:Hg19::chr9:15850201..15850216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203238 | |EntrezGene=203238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29828 | |HGNC=29828 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000498725_5end | |association_with_transcript=-7bp_to_ENST00000498725_5end | ||
|cluster_id=chr9:15850201..15850216,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_5_at_C9orf93_5end | |description=CAGE_peak_5_at_C9orf93_5end | ||
|id=chr9:15850201..15850216,+ | |id=chr9:15850201..15850216,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.99e-54!10;CL:0000541!1.99e-54!10;CL:0000147!9.37e-39!14;CL:0002567!2.75e-34!3;CL:0000710!5.56e-27!20;CL:0000075!7.64e-20!27;CL:0002077!3.97e-16!33;CL:0000325!1.50e-13!39;CL:0002566!7.03e-13!1;CL:0000333!3.13e-12!41;CL:0000133!2.01e-08!59;CL:0000221!6.33e-07!71 | |ontology_enrichment_celltype=CL:0000148!1.99e-54!10;CL:0000541!1.99e-54!10;CL:0000147!9.37e-39!14;CL:0002567!2.75e-34!3;CL:0000710!5.56e-27!20;CL:0000075!7.64e-20!27;CL:0002077!3.97e-16!33;CL:0000325!1.50e-13!39;CL:0002566!7.03e-13!1;CL:0000333!3.13e-12!41;CL:0000133!2.01e-08!59;CL:0000221!6.33e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.25e-96;10!CL:0000147;1.07e-68;14!CL:0002567;2.23e-59;3!CL:0000710;4.02e-48;20!CL:0000075;1.17e-35;27!CL:0002077;5.89e-25;34!CL:0002566;1.53e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.96e-96,10;CL:0000541,3.96e-96,10;CL:0000147,1.02e-68,14;CL:0002567,1.49e-59,3;CL:0000710,3.89e-48,20;CL:0000075,1.14e-35,27;CL:0002077,2.54e-28,34;CL:0000333,2.22e-22,41;CL:0002566,1.53e-21,1;CL:0000133,9.81e-16,59;CL:0000221,6.18e-13,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.11e-08;59!CL:0000221;2.60e-07;72 | |||
|ontology_enrichment_disease=DOID:0060084!1.06e-15!3;DOID:127!1.06e-15!3;DOID:0060072!5.10e-12!4;DOID:1909!5.41e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.47e-11;2!DOID:0060084;7.50e-08;3!DOID:127;7.50e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.47e-11,2;DOID:0060084,7.76e-08,3;DOID:127,7.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002360!1.49e-22!2;UBERON:0000094!1.49e-22!2;UBERON:0007645!1.49e-22!2;UBERON:0006834!3.45e-12!1;UBERON:0002363!4.31e-12!1;UBERON:0007647!4.31e-12!1;UBERON:0010115!4.31e-12!1 | |ontology_enrichment_uberon=UBERON:0002360!1.49e-22!2;UBERON:0000094!1.49e-22!2;UBERON:0007645!1.49e-22!2;UBERON:0006834!3.45e-12!1;UBERON:0002363!4.31e-12!1;UBERON:0007647!4.31e-12!1;UBERON:0010115!4.31e-12!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@C9orf93 | |short_description=p5@C9orf93 | ||
}} | }} |
Latest revision as of 19:29, 16 September 2015
Short description: | p5@C9orf93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C9orf93_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -7bp_to_ENST00000498725_5end |
EntrezGene: | C9orf93 |
HGNC: | 29828 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.96e-96 | 10 |
melanoblast | 3.96e-96 | 10 |
pigment cell | 1.02e-68 | 14 |
light melanocyte | 1.49e-59 | 3 |
neurecto-epithelial cell | 3.89e-48 | 20 |
columnar/cuboidal epithelial cell | 1.14e-35 | 27 |
ecto-epithelial cell | 2.54e-28 | 34 |
migratory neural crest cell | 2.22e-22 | 41 |
dark melanocyte | 1.53e-21 | 1 |
neurectodermal cell | 9.81e-16 | 59 |
ectodermal cell | 6.18e-13 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.47e-11 | 2 |
cell type benign neoplasm | 7.76e-08 | 3 |
leiomyoma | 7.76e-08 | 3 |