FFCP PHASE1:Hg19::chr9:33816814..33816856,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54926 | |EntrezGene=54926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=19907 | |HGNC=19907 | ||
|TSSclassifier=strong | |||
|UniProt=Q712K3 | |UniProt=Q712K3 | ||
|association_with_transcript=-325bp_to_NM_017811,uc003ztm.2_5end | |association_with_transcript=-325bp_to_NM_017811,uc003ztm.2_5end | ||
|cluster_id=chr9:33816814..33816856,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_9_at_UBE2R2_5end | |description=CAGE_peak_9_at_UBE2R2_5end | ||
|id=chr9:33816814..33816856,+ | |id=chr9:33816814..33816856,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.80e-27!42;CL:0000860!3.11e-27!45;CL:0000766!4.74e-16!76;CL:0002194!1.65e-15!63;CL:0000576!1.65e-15!63;CL:0000040!1.65e-15!63;CL:0000559!1.65e-15!63;CL:0002009!5.13e-15!65;CL:0000557!3.79e-12!71;CL:0000839!5.89e-12!70;CL:0000763!8.00e-08!112;CL:0000049!8.00e-08!112;CL:0002393!2.41e-07!9;CL:0002397!2.41e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.80e-27!42;CL:0000860!3.11e-27!45;CL:0000766!4.74e-16!76;CL:0002194!1.65e-15!63;CL:0000576!1.65e-15!63;CL:0000040!1.65e-15!63;CL:0000559!1.65e-15!63;CL:0002009!5.13e-15!65;CL:0000557!3.79e-12!71;CL:0000839!5.89e-12!70;CL:0000763!8.00e-08!112;CL:0000049!8.00e-08!112;CL:0002393!2.41e-07!9;CL:0002397!2.41e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-59;33!CL:0002057;1.21e-59;33!CL:0000576;9.25e-46;48!CL:0000473;3.87e-43;39!CL:0000234;3.87e-43;39!CL:0000766;5.63e-33;69!CL:0002393;2.35e-15;6!CL:0002397;2.35e-15;6!CL:0000094;9.84e-15;8!CL:0000763;1.65e-14;100!CL:0000081;1.77e-13;11!CL:0002087;3.41e-11;104!CL:0000738;6.49e-09;136!CL:0000875;1.30e-08;3!CL:0002396;1.30e-08;3!CL:0000767;1.58e-07;3!CL:0000771;7.30e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.89e-87,42;CL:0002057,4.89e-87,42;CL:0000473,2.35e-78,48;CL:0000234,2.35e-78,48;CL:0000766,7.21e-68,72;CL:0002194,2.93e-60,59;CL:0000576,2.93e-60,59;CL:0000040,2.93e-60,59;CL:0000559,2.93e-60,59;CL:0002009,6.31e-58,61;CL:0000839,1.05e-52,66;CL:0000557,9.38e-52,67;CL:0000763,6.54e-43,108;CL:0000049,6.54e-43,108;CL:0000738,5.00e-33,136;CL:0002087,1.29e-28,115;CL:0000988,6.25e-26,177;CL:0000037,1.94e-25,168;CL:0002032,1.83e-24,161;CL:0000837,1.83e-24,161;CL:0002031,5.89e-24,120;CL:0002393,2.21e-22,9;CL:0002397,2.21e-22,9;CL:0000094,8.17e-15,8;CL:0000081,1.56e-13,11;CL:0000134,3.14e-12,354;CL:0002320,1.06e-11,361;CL:0000219,1.96e-10,386;CL:0000048,3.23e-09,427;CL:0000723,7.05e-09,433;CL:0000875,1.14e-08,3;CL:0002396,1.14e-08,3;CL:0000034,1.93e-08,441;CL:0000767,1.43e-07,3;CL:0000771,7.32e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.25e-63;42!CL:0000049;3.69e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.32e-10!80;UBERON:0001474!3.93e-09!86;UBERON:0002193!1.71e-08!112;UBERON:0002390!3.10e-08!102;UBERON:0003061!3.10e-08!102;UBERON:0004765!6.92e-08!101;UBERON:0001434!6.92e-08!101;UBERON:0002405!9.04e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!3.32e-10!80;UBERON:0001474!3.93e-09!86;UBERON:0002193!1.71e-08!112;UBERON:0002390!3.10e-08!102;UBERON:0003061!3.10e-08!102;UBERON:0004765!6.92e-08!101;UBERON:0001434!6.92e-08!101;UBERON:0002405!9.04e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-44,76;UBERON:0001474,3.02e-40,82;UBERON:0004765,1.14e-35,90;UBERON:0002390,1.30e-35,98;UBERON:0003061,1.30e-35,98;UBERON:0002405,3.71e-34,93;UBERON:0002193,3.15e-31,108;UBERON:0001434,5.58e-31,100;UBERON:0003081,1.77e-19,203;UBERON:0002204,4.66e-18,167;UBERON:0000926,1.05e-11,315;UBERON:0004120,1.05e-11,315;UBERON:0006603,1.05e-11,315;UBERON:0002384,5.55e-11,371 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0.873765488520689,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,0.408001382488506,0.626909442956176,0,0.136874425072884,0.376627918784408,0.0764134057479513,0,0,1.96682138424452,1.15148819429164,2.47705797305722,0,0,0,0,0,0.293600439334847,7.75593571944628,9.42558903109666,3.25516306073778,0,0,0.257575567634187,9.45088552067171,9.82477453590904,12.3717871205786,6.74044207026485,7.40102198439286,6.81354015969228,4.89077066947656,5.37937483711111,4.7296445977717,3.10271112662957,1.29096936716765,4.06279459783025,7.71793592124679,9.27880910196676,8.31476892446813,6.42776173978895,10.5906578935111,8.31138263538754,5.27762080298746,6.98122801675712,6.39337125799041,1.7412554317715,4.53908179752912,3.11411124497787,2.51248665256743,2.60741459210101,3.04064382587163,2.42159801053347,4.41933163185078,5.69632297393592,2.95757400836718,3.82687739937078,2.09658645508376,0.898629049171961,0.450530678524519,0.32145117339416,3.99017841237748,5.76858363877361,4.56660384411585,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.434539556882471,0,0,0.283604451492204,0.665188192387692,0.43917392846563,0.458426764241994,0,0,0.324547393654683,0.696518949197069,0.132957960518865,0,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0.735326160691737,0,0.267899184852239,0.22452937262617,0.337834441449967,0,1.89853131913626,0.732806975721629,13.1780417436063,19.3890132074163,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0.936480230490962,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.103325781175765,1.18800285728205,0,0.910161361938026,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0.635795703478686,0.300091096084402,0.618315175430633,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.184099797284599,1.45481451136931,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0.662648841607426,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.354920400119532,0.674338760312407,0.241011029883482,0.330881918197182,0.217879444092406,0,0.269662616320329,0.588664395376038,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.614942192715568,0.514703430895577,0.439001141634502,0,0.301586917234893,0.185176890317059,0.651616610620649,0,0,0.34779121492523,0.469634776943287,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0.432359860250884,0,0.190493682876507,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,0.387815147273333,3.57656445851882,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,1.74306691720059,0.299918973546171,0,1.00451418286425,0,0.239624855491583,2.29723871668228,1.42636905040718,0.434343920002738,0,0.179060963239896,0,0.788123040807709,0,0.385029108839245,0,0,0,0,0.637938751653163,3.74503511973591,0,2.48649308061621,0.613457458595699,0.500170521059677,0.542530047399471,0.207970861530807,0,0.473107245101804,0.702848489956279,0.601892199455438,0,2.0694614258501,0,0.553107505625109,0.434418072340414,0.195801157462741,0,0.620304078368662,3.01999881146064,1.49418580924822,0,0,1.20956117331872,0.496215615637554,0.306923946576125,0.561320188866147,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.348631135379878,0.241718899183244,0,0.0920809889358963,0.459257792658427,0,0.262248829918848,0.451199612907412,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0.340187410553031,0.431831832204279,0,1.35473218771926,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,1.31205858279882,0,0.206082023295445,0.366277859273374,0.247528499761764,0,0.650060246036521,4.82051789532479,0.290012154876366,0,0.15350367472613,0.137836572484531,0.429680979473094,0.580066775656914,0.255679882248303,0.712256285173899,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0.6970372701606,0,0,0,0.18532421910392,0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| ||
|short_description=p9@UBE2R2 | |short_description=p9@UBE2R2 | ||
}} | }} |
Latest revision as of 04:32, 17 September 2015
Short description: | p9@UBE2R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_UBE2R2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -325bp_to_NM_017811, uc003ztm.2_5end |
EntrezGene: | UBE2R2 |
HGNC: | 19907 |
UniProt: | Q712K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.62e-44 | 76 |
bone element | 3.02e-40 | 82 |
skeletal element | 1.14e-35 | 90 |
hematopoietic system | 1.30e-35 | 98 |
blood island | 1.30e-35 | 98 |
immune system | 3.71e-34 | 93 |
hemolymphoid system | 3.15e-31 | 108 |
skeletal system | 5.58e-31 | 100 |
lateral plate mesoderm | 1.77e-19 | 203 |
musculoskeletal system | 4.66e-18 | 167 |
mesoderm | 1.05e-11 | 315 |
mesoderm-derived structure | 1.05e-11 | 315 |
presumptive mesoderm | 1.05e-11 | 315 |
connective tissue | 5.55e-11 | 371 |