FFCP PHASE1:Hg19::chr16:16103486..16103493,+: Difference between revisions
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|id=chr16:16103486..16103493,+
|short_description=p19@ABCC1
|description=CAGE_peak_19_at_ABCC1_5end
|association_with_transcript=-139bp_to_uc002del.3_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4363 | |EntrezGene=4363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=51 | |HGNC=51 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-139bp_to_uc002del.3_5end | |||
|cluster_id=chr16:16103486..16103493,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_19_at_ABCC1_5end | |||
|id=chr16:16103486..16103493,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.66e-21;5 | |||
|ontology_enrichment_disease=DOID:114!1.12e-09!2;DOID:4468!1.44e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002079!3.75e-18!1;UBERON:0001301!4.44e-18!1;UBERON:0002046!2.58e-14!5;UBERON:0004117!2.58e-14!5;UBERON:0007689!2.58e-14!5;UBERON:0007123!2.58e-14!5;UBERON:0003091!2.58e-14!5;UBERON:0002081!9.46e-10!2;UBERON:0000341!1.22e-09!2;UBERON:0000974!1.57e-07!10;UBERON:0009722!5.31e-07!11;UBERON:0007690!5.31e-07!11;UBERON:0004151!6.50e-07!3;UBERON:0006947!6.88e-07!3;UBERON:0004054!6.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.66e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.21e-21,5;UBERON:0004117,4.21e-21,5;UBERON:0007689,4.21e-21,5;UBERON:0007123,4.21e-21,5;UBERON:0003091,4.21e-21,5;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p19@ABCC1 | |||
}} | }} |
Latest revision as of 21:29, 24 September 2015
Short description: | p19@ABCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ABCC1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | -139bp_to_uc002del.3_5end |
EntrezGene: | ABCC1 |
HGNC: | 51 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.21e-21 | 5 |
pharyngeal pouch | 4.21e-21 | 5 |
thyroid diverticulum | 4.21e-21 | 5 |
pharyngeal pouch 2 | 4.21e-21 | 5 |
thyroid primordium | 4.21e-21 | 5 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |