FFCP PHASE1:Hg19::chr9:93589662..93589730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6850 | |EntrezGene=6850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11491 | |HGNC=11491 | ||
|TSSclassifier=strong | |||
|UniProt=A8K4G2,P43405 | |UniProt=A8K4G2,P43405 | ||
|association_with_transcript=0bp_to_NM_001174167,uc004arc.2_5end | |association_with_transcript=0bp_to_NM_001174167,uc004arc.2_5end | ||
|cluster_id=chr9:93589662..93589730,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_SYK_5end | |description=CAGE_peak_2_at_SYK_5end | ||
|id=chr9:93589662..93589730,+ | |id=chr9:93589662..93589730,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.77e-56!140;CL:0002087!4.56e-50!119;CL:0000037!9.00e-50!172;CL:0000566!9.00e-50!172;CL:0002032!5.16e-46!165;CL:0000837!5.16e-46!165;CL:0000988!2.45e-45!182;CL:0002031!1.26e-44!124;CL:0000766!5.44e-42!76;CL:0002057!3.69e-40!42;CL:0000860!1.57e-36!45;CL:0002194!5.28e-35!63;CL:0000576!5.28e-35!63;CL:0000040!5.28e-35!63;CL:0000559!5.28e-35!63;CL:0000839!4.34e-34!70;CL:0002009!1.94e-33!65;CL:0000557!2.25e-33!71;CL:0000763!3.05e-31!112;CL:0000049!3.05e-31!112;CL:0000945!1.13e-29!24;CL:0000826!1.13e-29!24;CL:0000236!3.55e-20!14;CL:0000542!6.96e-13!53;CL:0000051!6.96e-13!53;CL:0002393!1.98e-12!9;CL:0002397!1.98e-12!9;CL:0000838!4.33e-12!52;CL:0000134!9.32e-10!358;CL:0002320!4.12e-09!365;CL:0000094!1.18e-07!8;CL:0000219!3.12e-07!390 | |ontology_enrichment_celltype=CL:0000738!5.77e-56!140;CL:0002087!4.56e-50!119;CL:0000037!9.00e-50!172;CL:0000566!9.00e-50!172;CL:0002032!5.16e-46!165;CL:0000837!5.16e-46!165;CL:0000988!2.45e-45!182;CL:0002031!1.26e-44!124;CL:0000766!5.44e-42!76;CL:0002057!3.69e-40!42;CL:0000860!1.57e-36!45;CL:0002194!5.28e-35!63;CL:0000576!5.28e-35!63;CL:0000040!5.28e-35!63;CL:0000559!5.28e-35!63;CL:0000839!4.34e-34!70;CL:0002009!1.94e-33!65;CL:0000557!2.25e-33!71;CL:0000763!3.05e-31!112;CL:0000049!3.05e-31!112;CL:0000945!1.13e-29!24;CL:0000826!1.13e-29!24;CL:0000236!3.55e-20!14;CL:0000542!6.96e-13!53;CL:0000051!6.96e-13!53;CL:0002393!1.98e-12!9;CL:0002397!1.98e-12!9;CL:0000838!4.33e-12!52;CL:0000134!9.32e-10!358;CL:0002320!4.12e-09!365;CL:0000094!1.18e-07!8;CL:0000219!3.12e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.43e-44;24!CL:0000236;2.26e-26;13!CL:0000576;2.96e-17;48!CL:0002087;4.15e-16;104!CL:0000860;3.53e-15;33!CL:0002057;3.53e-15;33!CL:0000766;1.43e-14;69!CL:0000738;5.24e-13;136!CL:0002393;6.21e-13;6!CL:0002397;6.21e-13;6!CL:0000542;9.39e-12;53!CL:0000473;1.58e-10;39!CL:0000234;1.58e-10;39!CL:0000094;4.98e-09;8!CL:0000875;5.64e-08;3!CL:0002396;5.64e-08;3!CL:0000775;3.08e-07;3!CL:0000784;9.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.99e-51,136;CL:0002087,1.74e-46,115;CL:0000945,4.34e-44,24;CL:0000826,4.34e-44,24;CL:0000037,1.96e-39,168;CL:0002031,6.84e-37,120;CL:0000988,1.48e-36,177;CL:0002032,1.84e-34,161;CL:0000837,1.84e-34,161;CL:0000860,3.13e-30,42;CL:0002057,3.13e-30,42;CL:0000236,3.55e-28,14;CL:0000766,5.83e-28,72;CL:0000473,1.82e-25,48;CL:0000234,1.82e-25,48;CL:0002194,7.66e-24,59;CL:0000576,7.66e-24,59;CL:0000040,7.66e-24,59;CL:0000559,7.66e-24,59;CL:0002009,8.49e-23,61;CL:0000839,1.82e-20,66;CL:0000557,4.85e-20,67;CL:0002393,4.06e-19,9;CL:0002397,4.06e-19,9;CL:0000542,6.42e-18,53;CL:0000051,6.42e-18,53;CL:0000838,1.09e-16,52;CL:0000763,1.50e-16,108;CL:0000049,1.50e-16,108;CL:0000134,4.78e-10,354;CL:0002320,1.48e-09,361;CL:0000094,5.07e-09,8;CL:0000875,5.85e-08,3;CL:0002396,5.85e-08,3;CL:0000219,7.60e-08,386;CL:0000775,2.48e-07,3;CL:0000784,9.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-21;42!CL:0000051;9.39e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.44e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.90e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-42!102;UBERON:0003061!2.70e-42!102;UBERON:0002193!8.05e-40!112;UBERON:0002371!9.19e-28!80;UBERON:0001474!1.07e-24!86;UBERON:0002405!6.61e-23!115;UBERON:0004765!1.08e-18!101;UBERON:0001434!1.08e-18!101;UBERON:0003081!3.69e-13!216;UBERON:0000178!3.64e-12!15;UBERON:0000179!3.64e-12!15;UBERON:0000463!3.64e-12!15;UBERON:0002384!1.26e-08!375;UBERON:0007023!1.82e-08!115;UBERON:0002204!2.44e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.70e-42!102;UBERON:0003061!2.70e-42!102;UBERON:0002193!8.05e-40!112;UBERON:0002371!9.19e-28!80;UBERON:0001474!1.07e-24!86;UBERON:0002405!6.61e-23!115;UBERON:0004765!1.08e-18!101;UBERON:0001434!1.08e-18!101;UBERON:0003081!3.69e-13!216;UBERON:0000178!3.64e-12!15;UBERON:0000179!3.64e-12!15;UBERON:0000463!3.64e-12!15;UBERON:0002384!1.26e-08!375;UBERON:0007023!1.82e-08!115;UBERON:0002204!2.44e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.13e-19;15!UBERON:0000179;2.13e-19;15!UBERON:0000463;2.13e-19;15!UBERON:0002390;6.74e-13;32!UBERON:0002193;2.04e-09;42!UBERON:0002106;1.47e-07;3!UBERON:0004177;2.93e-07;5!UBERON:0005057;2.93e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.14e-34,98;UBERON:0003061,3.14e-34,98;UBERON:0002193,1.70e-33,108;UBERON:0002405,7.03e-20,93;UBERON:0000178,1.68e-19,15;UBERON:0000179,1.68e-19,15;UBERON:0000463,1.68e-19,15;UBERON:0002371,9.87e-17,76;UBERON:0001474,6.14e-15,82;UBERON:0004765,6.26e-13,90;UBERON:0003081,8.55e-12,203;UBERON:0001434,6.86e-11,100;UBERON:0002384,6.89e-09,371;UBERON:0002106,1.27e-07,3;UBERON:0004854,1.27e-07,3;UBERON:0009034,1.27e-07,3;UBERON:0002095,1.27e-07,3;UBERON:0004782,1.27e-07,3;UBERON:0003281,1.27e-07,3;UBERON:0009664,1.27e-07,3;UBERON:0002296,1.27e-07,3;UBERON:0005602,1.27e-07,3;UBERON:0001179,1.27e-07,3;UBERON:0006293,1.27e-07,3 | |||
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|short_description=p2@SYK | |short_description=p2@SYK | ||
}} | }} |
Latest revision as of 06:08, 18 September 2015
Short description: | p2@SYK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYK_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_NM_001174167, uc004arc.2_5end |
EntrezGene: | SYK |
HGNC: | 11491 |
UniProt: | A8K4G2P43405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.14e-34 | 98 |
blood island | 3.14e-34 | 98 |
hemolymphoid system | 1.70e-33 | 108 |
immune system | 7.03e-20 | 93 |
blood | 1.68e-19 | 15 |
haemolymphatic fluid | 1.68e-19 | 15 |
organism substance | 1.68e-19 | 15 |
bone marrow | 9.87e-17 | 76 |
bone element | 6.14e-15 | 82 |
skeletal element | 6.26e-13 | 90 |
lateral plate mesoderm | 8.55e-12 | 203 |
skeletal system | 6.86e-11 | 100 |
connective tissue | 6.89e-09 | 371 |
spleen | 1.27e-07 | 3 |
gastrointestinal system mesentery | 1.27e-07 | 3 |
stomach region | 1.27e-07 | 3 |
mesentery | 1.27e-07 | 3 |
gastrointestinal system serosa | 1.27e-07 | 3 |
mesentery of stomach | 1.27e-07 | 3 |
gut mesentery | 1.27e-07 | 3 |
dorsal mesentery | 1.27e-07 | 3 |
dorsal mesogastrium | 1.27e-07 | 3 |
peritoneal cavity | 1.27e-07 | 3 |
spleen primordium | 1.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.90e-08 | 10 |