FFCP PHASE1:Hg19::chrX:147582402..147582414,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2334 | |EntrezGene=2334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3776 | |HGNC=3776 | ||
|TSSclassifier=strong | |||
|UniProt=P51816 | |UniProt=P51816 | ||
|association_with_transcript=-114bp_to_ENST00000370458_5end | |association_with_transcript=-114bp_to_ENST00000370458_5end | ||
|cluster_id=chrX:147582402..147582414,+ | |||
|description=CAGE_peak_5_at_AFF2_5end | |description=CAGE_peak_5_at_AFF2_5end | ||
|id=chrX:147582402..147582414,+ | |id=chrX:147582402..147582414,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000081;6.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,5.47e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.01e-18;1!UBERON:0007297;1.38e-09;2!UBERON:0006241;8.38e-07;3!UBERON:0003057;8.38e-07;3 | |||
|ontology_enrichment_disease=DOID:2531!1.30e-07!51;DOID:0060083!1.30e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.29e-13!82;UBERON:0005743!5.43e-12!86;UBERON:0001049!5.78e-12!57;UBERON:0005068!5.78e-12!57;UBERON:0006241!5.78e-12!57;UBERON:0007135!5.78e-12!57;UBERON:0000073!4.78e-10!94;UBERON:0001016!4.78e-10!94;UBERON:0000955!3.45e-09!69;UBERON:0006238!3.45e-09!69;UBERON:0002616!4.74e-09!59;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!6.16e-08!115;UBERON:0003075!6.74e-08!86;UBERON:0007284!6.74e-08!86;UBERON:0002780!7.00e-08!41;UBERON:0001890!7.00e-08!41;UBERON:0006240!7.00e-08!41;UBERON:0001893!7.12e-08!34;UBERON:0003080!1.35e-07!42;UBERON:0001869!1.55e-07!32;UBERON:0001950!2.91e-07!20;UBERON:0002346!3.04e-07!90;UBERON:0002791!4.76e-07!33 | |ontology_enrichment_uberon=UBERON:0001017!5.29e-13!82;UBERON:0005743!5.43e-12!86;UBERON:0001049!5.78e-12!57;UBERON:0005068!5.78e-12!57;UBERON:0006241!5.78e-12!57;UBERON:0007135!5.78e-12!57;UBERON:0000073!4.78e-10!94;UBERON:0001016!4.78e-10!94;UBERON:0000955!3.45e-09!69;UBERON:0006238!3.45e-09!69;UBERON:0002616!4.74e-09!59;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!6.16e-08!115;UBERON:0003075!6.74e-08!86;UBERON:0007284!6.74e-08!86;UBERON:0002780!7.00e-08!41;UBERON:0001890!7.00e-08!41;UBERON:0006240!7.00e-08!41;UBERON:0001893!7.12e-08!34;UBERON:0003080!1.35e-07!42;UBERON:0001869!1.55e-07!32;UBERON:0001950!2.91e-07!20;UBERON:0002346!3.04e-07!90;UBERON:0002791!4.76e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.01e-18;1!UBERON:0001301;8.01e-18;1!UBERON:0001153;8.01e-18;1!UBERON:0009854;8.01e-18;1!UBERON:0002331;1.78e-15;10!UBERON:0002240;8.38e-07;3!UBERON:0005174;8.38e-07;3!UBERON:0006947;8.38e-07;3!UBERON:0001137;8.38e-07;3!UBERON:0004054;8.38e-07;3!UBERON:0000478;8.68e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.44e-18,1;UBERON:0001154,7.37e-18,1;UBERON:0001153,7.37e-18,1;UBERON:0001045,7.37e-18,1;UBERON:0002331,1.57e-15,10;UBERON:0000358,1.57e-15,10;UBERON:0000307,1.57e-15,10;UBERON:0000091,1.57e-15,10;UBERON:0000087,1.57e-15,10;UBERON:0007010,1.57e-15,10;UBERON:0007806,1.57e-15,10;UBERON:0008780,1.57e-15,10;UBERON:0005728,1.57e-15,10;UBERON:0002240,6.50e-07,3;UBERON:0005174,6.50e-07,3;UBERON:0001137,6.50e-07,3;UBERON:0006947,6.88e-07,3;UBERON:0004054,6.88e-07,3;UBERON:0000478,8.26e-07,24 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852139206383318,0.568676929949686,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,1.0126579934476,0.194874010322397,0.504867548488229,0,0,1.06502877754984,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.00883967391873,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0.637705090915289,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.500547425135725,0.586164286206121,0.556812347790485,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,1.18608451472249,0.988511511572023,1.04421949505455,0.067401132980677,0,0,0.729819156862664,0,0,0,2.41981432097328,0.61214552326098,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,2.55764456599881,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0,0.248385611765534,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.756215088665154,0,0.322951291263702,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.203909198930495,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,1.6906229103336,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0.631086248772738,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.452122368852043,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852139206383318,0.568676929949686,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,1.0126579934476,0.194874010322397,0.504867548488229,0,0,1.06502877754984,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.00883967391873,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0.637705090915289,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.500547425135725,0.586164286206121,0.556812347790485,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,1.18608451472249,0.988511511572023,1.04421949505455,0.067401132980677,0,0,0.729819156862664,0,0,0,2.41981432097328,0.61214552326098,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,2.55764456599881,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0,0.248385611765534,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.756215088665154,0,0.322951291263702,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.203909198930495,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,1.6906229103336,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0.631086248772738,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.452122368852043,0.124149428591716,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p5@AFF2 | |short_description=p5@AFF2 | ||
}} | }} |
Latest revision as of 20:34, 19 September 2015
Short description: | p5@AFF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AFF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_ENST00000370458_5end |
EntrezGene: | AFF2 |
HGNC: | 3776 |
UniProt: | P51816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 5.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
epididymis | 4.44e-18 | 1 |
vermiform appendix | 7.37e-18 | 1 |
caecum | 7.37e-18 | 1 |
midgut | 7.37e-18 | 1 |
umbilical cord | 1.57e-15 | 10 |
blastocyst | 1.57e-15 | 10 |
blastula | 1.57e-15 | 10 |
bilaminar disc | 1.57e-15 | 10 |
inner cell mass | 1.57e-15 | 10 |
cleaving embryo | 1.57e-15 | 10 |
connecting stalk | 1.57e-15 | 10 |
inner cell mass derived epiblast | 1.57e-15 | 10 |
extraembryonic mesoderm | 1.57e-15 | 10 |
spinal cord | 6.50e-07 | 3 |
dorsal region element | 6.50e-07 | 3 |
dorsum | 6.50e-07 | 3 |
male genital duct | 6.88e-07 | 3 |
internal male genitalia | 6.88e-07 | 3 |
extraembryonic structure | 8.26e-07 | 24 |