FFCP PHASE1:Hg19::chrX:153668432..153668446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2664 | |EntrezGene=2664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4226 | |HGNC=4226 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=92bp_to_ENST00000489589_5end | |association_with_transcript=92bp_to_ENST00000489589_5end | ||
|cluster_id=chrX:153668432..153668446,+ | |||
|description=CAGE_peak_22_at_GDI1_5end | |description=CAGE_peak_22_at_GDI1_5end | ||
|id=chrX:153668432..153668446,+ | |id=chrX:153668432..153668446,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.03e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,8.69e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;5.03e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.50e-18!57;UBERON:0005068!6.50e-18!57;UBERON:0006241!6.50e-18!57;UBERON:0007135!6.50e-18!57;UBERON:0001869!1.33e-16!32;UBERON:0001893!5.09e-16!34;UBERON:0005743!7.89e-16!86;UBERON:0002020!8.44e-16!34;UBERON:0003528!8.44e-16!34;UBERON:0002791!1.31e-15!33;UBERON:0001017!1.82e-15!82;UBERON:0002780!2.46e-15!41;UBERON:0001890!2.46e-15!41;UBERON:0006240!2.46e-15!41;UBERON:0000073!3.19e-15!94;UBERON:0001016!3.19e-15!94;UBERON:0003080!1.26e-14!42;UBERON:0003075!1.29e-14!86;UBERON:0007284!1.29e-14!86;UBERON:0002346!1.27e-13!90;UBERON:0002616!2.32e-13!59;UBERON:0002619!3.04e-13!22;UBERON:0000956!9.27e-13!25;UBERON:0000203!9.27e-13!25;UBERON:0000955!1.24e-12!69;UBERON:0006238!1.24e-12!69;UBERON:0001950!7.76e-12!20;UBERON:0003056!1.30e-11!61;UBERON:0000033!4.35e-09!123;UBERON:0004121!6.28e-09!169;UBERON:0000924!1.61e-08!173;UBERON:0006601!1.61e-08!173;UBERON:0000153!2.51e-08!129;UBERON:0007811!2.51e-08!129;UBERON:0007023!2.30e-07!115;UBERON:0000475!7.74e-07!365;UBERON:0000025!9.45e-07!194 | |ontology_enrichment_uberon=UBERON:0001049!6.50e-18!57;UBERON:0005068!6.50e-18!57;UBERON:0006241!6.50e-18!57;UBERON:0007135!6.50e-18!57;UBERON:0001869!1.33e-16!32;UBERON:0001893!5.09e-16!34;UBERON:0005743!7.89e-16!86;UBERON:0002020!8.44e-16!34;UBERON:0003528!8.44e-16!34;UBERON:0002791!1.31e-15!33;UBERON:0001017!1.82e-15!82;UBERON:0002780!2.46e-15!41;UBERON:0001890!2.46e-15!41;UBERON:0006240!2.46e-15!41;UBERON:0000073!3.19e-15!94;UBERON:0001016!3.19e-15!94;UBERON:0003080!1.26e-14!42;UBERON:0003075!1.29e-14!86;UBERON:0007284!1.29e-14!86;UBERON:0002346!1.27e-13!90;UBERON:0002616!2.32e-13!59;UBERON:0002619!3.04e-13!22;UBERON:0000956!9.27e-13!25;UBERON:0000203!9.27e-13!25;UBERON:0000955!1.24e-12!69;UBERON:0006238!1.24e-12!69;UBERON:0001950!7.76e-12!20;UBERON:0003056!1.30e-11!61;UBERON:0000033!4.35e-09!123;UBERON:0004121!6.28e-09!169;UBERON:0000924!1.61e-08!173;UBERON:0006601!1.61e-08!173;UBERON:0000153!2.51e-08!129;UBERON:0007811!2.51e-08!129;UBERON:0007023!2.30e-07!115;UBERON:0000475!7.74e-07!365;UBERON:0000025!9.45e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-27;22!UBERON:0001950;1.23e-24;20!UBERON:0000956;3.16e-24;25!UBERON:0000203;3.16e-24;25!UBERON:0001871;4.97e-24;6!UBERON:0001869;1.08e-17;32!UBERON:0001893;5.86e-17;34!UBERON:0002791;6.01e-17;32!UBERON:0003528;5.76e-16;34!UBERON:0002020;5.76e-16;34!UBERON:0002771;7.86e-15;2!UBERON:0001876;2.34e-14;2!UBERON:0000349;1.28e-12;5!UBERON:0002780;5.51e-11;41!UBERON:0001890;5.51e-11;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.08e-28,22;UBERON:0001950,7.58e-25,20;UBERON:0001871,1.51e-24,6;UBERON:0000956,1.60e-24,25;UBERON:0000203,1.60e-24,25;UBERON:0002791,5.85e-19,32;UBERON:0001869,5.85e-19,32;UBERON:0003528,8.89e-18,34;UBERON:0002020,8.89e-18,34;UBERON:0001893,8.89e-18,34;UBERON:0001876,6.91e-15,2;UBERON:0002771,7.93e-15,2;UBERON:0002780,1.58e-14,41;UBERON:0001890,1.58e-14,41;UBERON:0003080,1.58e-14,41;UBERON:0006240,1.58e-14,41;UBERON:0000349,4.19e-13,5;UBERON:0001049,1.70e-12,56;UBERON:0005068,1.70e-12,56;UBERON:0006241,1.70e-12,56;UBERON:0007135,1.70e-12,56;UBERON:0000073,6.45e-11,53;UBERON:0002616,6.45e-11,53;UBERON:0001017,1.31e-09,81;UBERON:0003075,1.56e-09,82;UBERON:0007284,1.56e-09,82;UBERON:0003056,2.74e-09,61;UBERON:0002346,5.42e-09,86;UBERON:0001016,1.88e-08,89;UBERON:0000955,4.94e-08,68;UBERON:0006238,4.94e-08,68;UBERON:0000025,9.80e-08,192;UBERON:0010314,2.92e-07,132;UBERON:0010371,4.46e-07,104 | |||
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| ||
|short_description=p22@GDI1 | |short_description=p22@GDI1 | ||
}} | }} |
Latest revision as of 03:25, 20 September 2015
Short description: | p22@GDI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_GDI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENST00000489589_5end |
EntrezGene: | GDI1 |
HGNC: | 4226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 8.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 6.08e-28 | 22 |
neocortex | 7.58e-25 | 20 |
temporal lobe | 1.51e-24 | 6 |
cerebral cortex | 1.60e-24 | 25 |
pallium | 1.60e-24 | 25 |
regional part of telencephalon | 5.85e-19 | 32 |
cerebral hemisphere | 5.85e-19 | 32 |
brain grey matter | 8.89e-18 | 34 |
gray matter | 8.89e-18 | 34 |
telencephalon | 8.89e-18 | 34 |
amygdala | 6.91e-15 | 2 |
middle temporal gyrus | 7.93e-15 | 2 |
regional part of forebrain | 1.58e-14 | 41 |
forebrain | 1.58e-14 | 41 |
anterior neural tube | 1.58e-14 | 41 |
future forebrain | 1.58e-14 | 41 |
limbic system | 4.19e-13 | 5 |
neural tube | 1.70e-12 | 56 |
neural rod | 1.70e-12 | 56 |
future spinal cord | 1.70e-12 | 56 |
neural keel | 1.70e-12 | 56 |
regional part of nervous system | 6.45e-11 | 53 |
regional part of brain | 6.45e-11 | 53 |
central nervous system | 1.31e-09 | 81 |
neural plate | 1.56e-09 | 82 |
presumptive neural plate | 1.56e-09 | 82 |
pre-chordal neural plate | 2.74e-09 | 61 |
neurectoderm | 5.42e-09 | 86 |
nervous system | 1.88e-08 | 89 |
brain | 4.94e-08 | 68 |
future brain | 4.94e-08 | 68 |
tube | 9.80e-08 | 192 |
structure with developmental contribution from neural crest | 2.92e-07 | 132 |
ecto-epithelium | 4.46e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.10e-08 | 1 |