FFCP PHASE1:Hg19::chr5:147450477..147450521,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:147450477..147450521,+ | |||
|coexpression_cluster_id=C1195 | |||
|description=CAGE_peak_at_chr5:147450477..147450521,+ | |description=CAGE_peak_at_chr5:147450477..147450521,+ | ||
|id=chr5:147450477..147450521,+ | |id=chr5:147450477..147450521,+ | ||
|ontology_enrichment_celltype=CL:0002336!2.33e-08!1;CL:0002261!2.33e-08!1;CL:0002170!2.33e-08!1;CL:1001319!6.68e-08!1;CL:1000600!6.68e-08!1 | |ontology_enrichment_celltype=CL:0002336!2.33e-08!1;CL:0002261!2.33e-08!1;CL:0002170!2.33e-08!1;CL:1001319!6.68e-08!1;CL:1000600!6.68e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.27e-23;3!CL:0000083;7.35e-18;4!CL:0000622;1.60e-14;5!CL:0002251;2.76e-14;20!CL:0000154;2.45e-12;6!CL:0000150;1.12e-08;9!CL:0002076;4.59e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-23,3;CL:0000083,7.35e-18,4;CL:0000622,1.60e-14,5;CL:0002251,2.76e-14,20;CL:0000154,2.45e-12,6;CL:0000223,2.67e-11,58;CL:0000150,1.12e-08,9;CL:0002076,2.17e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.63e-08!14 | |ontology_enrichment_disease=DOID:1749!3.63e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:4074;3.61e-34;2!DOID:4905;3.61e-34;2!DOID:3498;3.61e-34;2!DOID:1793;7.35e-18;4!DOID:170;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,3.61e-34,2;DOID:4905,3.61e-34,2;DOID:3498,3.61e-34,2;DOID:1793,7.35e-18,4;DOID:170,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.36e-15!2;UBERON:0001255!3.58e-14!2;UBERON:0001556!3.58e-14!2;UBERON:0006562!1.95e-10!11;UBERON:0003126!1.53e-09!7;UBERON:0001005!1.53e-09!7;UBERON:0002372!1.52e-08!1;UBERON:0001961!1.52e-08!1;UBERON:0001744!1.52e-08!1;UBERON:0001735!1.52e-08!1;UBERON:0001301!4.11e-08!1;UBERON:0004645!6.68e-08!1;UBERON:0001256!6.68e-08!1;UBERON:0001259!6.68e-08!1;UBERON:0004921!8.78e-08!129;UBERON:0004185!8.78e-08!129;UBERON:0004119!2.45e-07!169;UBERON:0000925!2.45e-07!169;UBERON:0006595!2.45e-07!169;UBERON:0000065!3.07e-07!53;UBERON:0001007!4.12e-07!155;UBERON:0001555!4.12e-07!155;UBERON:0007026!4.12e-07!155;UBERON:0001042!8.72e-07!10;UBERON:0009145!8.72e-07!10 | |ontology_enrichment_uberon=UBERON:0003127!2.36e-15!2;UBERON:0001255!3.58e-14!2;UBERON:0001556!3.58e-14!2;UBERON:0006562!1.95e-10!11;UBERON:0003126!1.53e-09!7;UBERON:0001005!1.53e-09!7;UBERON:0002372!1.52e-08!1;UBERON:0001961!1.52e-08!1;UBERON:0001744!1.52e-08!1;UBERON:0001735!1.52e-08!1;UBERON:0001301!4.11e-08!1;UBERON:0004645!6.68e-08!1;UBERON:0001256!6.68e-08!1;UBERON:0001259!6.68e-08!1;UBERON:0004921!8.78e-08!129;UBERON:0004185!8.78e-08!129;UBERON:0004119!2.45e-07!169;UBERON:0000925!2.45e-07!169;UBERON:0006595!2.45e-07!169;UBERON:0000065!3.07e-07!53;UBERON:0001007!4.12e-07!155;UBERON:0001555!4.12e-07!155;UBERON:0007026!4.12e-07!155;UBERON:0001042!8.72e-07!10;UBERON:0009145!8.72e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;7.05e-34;2!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0001264;5.73e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0001264,5.73e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0006562,2.63e-07,11 | |||
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|short_description=p@chr5:147450477..147450521,+ | |short_description=p@chr5:147450477..147450521,+ | ||
}} | }} |
Latest revision as of 11:15, 30 July 2015
Short description: | p@chr5:147450477..147450521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:147450477..147450521, + |
Coexpression cluster: | C1195_ductal_oral_gastric_Eosinophils_hepatoblastoma_CD14_epitheloid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-23 | 3 |
epithelial cell of pancreas | 7.35e-18 | 4 |
acinar cell | 1.60e-14 | 5 |
epithelial cell of alimentary canal | 2.76e-14 | 20 |
protein secreting cell | 2.45e-12 | 6 |
endodermal cell | 2.67e-11 | 58 |
glandular epithelial cell | 1.12e-08 | 9 |
endo-epithelial cell | 2.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
pancreas | 5.73e-08 | 10 |
gland of gut | 6.13e-08 | 10 |
pharynx | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 3.61e-34 | 2 |
pancreatic carcinoma | 3.61e-34 | 2 |
pancreatic ductal adenocarcinoma | 3.61e-34 | 2 |
pancreatic cancer | 7.35e-18 | 4 |
endocrine gland cancer | 2.19e-12 | 6 |