FFCP PHASE1:Hg19::chr6:130686698..130686732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=-146bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |association_with_transcript=-146bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | ||
|cluster_id=chr6:130686698..130686732,+ | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_8_at_TMEM200A_5end | |description=CAGE_peak_8_at_TMEM200A_5end | ||
|id=chr6:130686698..130686732,+ | |id=chr6:130686698..130686732,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.28e-31!180;CL:0000359!7.71e-18!32;CL:0000192!1.51e-17!42;CL:0000514!1.51e-17!42;CL:0000680!1.71e-17!57;CL:0000056!1.71e-17!57;CL:0000355!1.71e-17!57;CL:0000187!3.81e-17!54;CL:0000393!5.62e-17!60;CL:0000211!5.62e-17!60;CL:0000183!7.35e-15!59;CL:0000057!2.82e-13!75;CL:0002334!2.29e-09!12;CL:0002539!3.58e-08!10;CL:0000222!2.30e-07!119 | |ontology_enrichment_celltype=CL:0000055!8.28e-31!180;CL:0000359!7.71e-18!32;CL:0000192!1.51e-17!42;CL:0000514!1.51e-17!42;CL:0000680!1.71e-17!57;CL:0000056!1.71e-17!57;CL:0000355!1.71e-17!57;CL:0000187!3.81e-17!54;CL:0000393!5.62e-17!60;CL:0000211!5.62e-17!60;CL:0000183!7.35e-15!59;CL:0000057!2.82e-13!75;CL:0002334!2.29e-09!12;CL:0002539!3.58e-08!10;CL:0000222!2.30e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.01e-24;32!CL:0002334;9.88e-16;12!CL:0000192;5.02e-14;43!CL:0002539;2.05e-11;10!CL:0000187;8.28e-09;55!CL:1000306;1.52e-08;4!CL:0002547;1.52e-08;4!CL:0002594;8.75e-08;4!CL:0000393;1.73e-07;61!CL:0000211;1.73e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.82e-26,32;CL:0000192,3.70e-19,43;CL:0000514,3.70e-19,43;CL:0000187,7.79e-16,55;CL:0002334,7.84e-16,12;CL:0000680,1.31e-14,58;CL:0000056,1.31e-14,58;CL:0000355,1.31e-14,58;CL:0000393,1.65e-13,61;CL:0000211,1.65e-13,61;CL:0000723,1.57e-11,433;CL:0002539,2.57e-11,10;CL:0000048,5.40e-11,427;CL:0000034,6.61e-11,441;CL:0000057,2.59e-09,76;CL:1000306,1.31e-08,4;CL:0002547,1.31e-08,4;CL:0002594,9.49e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.02e-14;43!CL:0000355;3.05e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!3.51e-07!14 | |ontology_enrichment_disease=DOID:2394!3.51e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.75e-12;14!DOID:0060072;7.53e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.20e-13,14;DOID:0060072,8.69e-08,4;DOID:0060084,9.62e-07,3;DOID:127,9.62e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.21e-17!63;UBERON:0001015!2.21e-17!63;UBERON:0000383!2.21e-17!63;UBERON:0004290!6.31e-17!70;UBERON:0001134!7.37e-17!61;UBERON:0002036!7.37e-17!61;UBERON:0003082!7.37e-17!61;UBERON:0000914!2.68e-16!83;UBERON:0002329!2.68e-16!83;UBERON:0003077!2.68e-16!83;UBERON:0003059!2.68e-16!83;UBERON:0007282!2.68e-16!83;UBERON:0009618!2.68e-16!83;UBERON:0007285!2.68e-16!83;UBERON:0000486!4.14e-15!82;UBERON:0001637!6.98e-13!42;UBERON:0003509!6.98e-13!42;UBERON:0004572!6.98e-13!42;UBERON:0002049!1.24e-11!79;UBERON:0007798!1.24e-11!79;UBERON:0004573!2.36e-11!33;UBERON:0004571!2.36e-11!33;UBERON:0000475!8.67e-10!365;UBERON:0001981!2.05e-09!60;UBERON:0007500!2.05e-09!60;UBERON:0004537!2.05e-09!60;UBERON:0006965!2.05e-09!60;UBERON:0001135!3.04e-09!15;UBERON:0000055!5.37e-09!69;UBERON:0005256!5.78e-09!143;UBERON:0004872!2.26e-08!84;UBERON:0004237!3.58e-08!10;UBERON:0004695!3.58e-08!10;UBERON:0002111!3.58e-08!10;UBERON:0004178!3.58e-08!10;UBERON:0002100!1.76e-07!216;UBERON:0000947!2.07e-07!21;UBERON:0010191!2.07e-07!21;UBERON:0004535!9.91e-07!110 | |ontology_enrichment_uberon=UBERON:0002385!2.21e-17!63;UBERON:0001015!2.21e-17!63;UBERON:0000383!2.21e-17!63;UBERON:0004290!6.31e-17!70;UBERON:0001134!7.37e-17!61;UBERON:0002036!7.37e-17!61;UBERON:0003082!7.37e-17!61;UBERON:0000914!2.68e-16!83;UBERON:0002329!2.68e-16!83;UBERON:0003077!2.68e-16!83;UBERON:0003059!2.68e-16!83;UBERON:0007282!2.68e-16!83;UBERON:0009618!2.68e-16!83;UBERON:0007285!2.68e-16!83;UBERON:0000486!4.14e-15!82;UBERON:0001637!6.98e-13!42;UBERON:0003509!6.98e-13!42;UBERON:0004572!6.98e-13!42;UBERON:0002049!1.24e-11!79;UBERON:0007798!1.24e-11!79;UBERON:0004573!2.36e-11!33;UBERON:0004571!2.36e-11!33;UBERON:0000475!8.67e-10!365;UBERON:0001981!2.05e-09!60;UBERON:0007500!2.05e-09!60;UBERON:0004537!2.05e-09!60;UBERON:0006965!2.05e-09!60;UBERON:0001135!3.04e-09!15;UBERON:0000055!5.37e-09!69;UBERON:0005256!5.78e-09!143;UBERON:0004872!2.26e-08!84;UBERON:0004237!3.58e-08!10;UBERON:0004695!3.58e-08!10;UBERON:0002111!3.58e-08!10;UBERON:0004178!3.58e-08!10;UBERON:0002100!1.76e-07!216;UBERON:0000947!2.07e-07!21;UBERON:0010191!2.07e-07!21;UBERON:0004535!9.91e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.23e-15;33!UBERON:0004571;2.23e-15;33!UBERON:0001637;1.36e-13;42!UBERON:0003509;1.36e-13;42!UBERON:0004572;1.36e-13;42!UBERON:0004237;2.05e-11;10!UBERON:0004695;2.05e-11;10!UBERON:0002111;2.05e-11;10!UBERON:0004178;2.05e-11;10!UBERON:0000947;7.23e-11;21!UBERON:0010191;7.23e-11;21!UBERON:0007500;1.40e-10;56!UBERON:0001981;1.40e-10;56!UBERON:0004537;1.40e-10;56!UBERON:0001135;1.10e-08;15!UBERON:0004797;1.52e-08;4!UBERON:0000415;1.52e-08;4!UBERON:0007240;1.52e-08;4!UBERON:0005742;1.52e-08;4!UBERON:0005734;1.52e-08;4!UBERON:0004664;1.52e-08;4!UBERON:0004663;1.52e-08;4!UBERON:0001310;8.75e-08;4!UBERON:0000055;9.05e-08;65!UBERON:0000992;2.26e-07;13!UBERON:0010260;9.69e-07;9 | |||
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| ||
|short_description=p8@TMEM200A | |short_description=p8@TMEM200A | ||
}} | }} |
Latest revision as of 17:29, 24 September 2015
Short description: | p8@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | -146bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.82e-26 | 32 |
smooth muscle cell | 3.70e-19 | 43 |
smooth muscle myoblast | 3.70e-19 | 43 |
muscle cell | 7.79e-16 | 55 |
preadipocyte | 7.84e-16 | 12 |
muscle precursor cell | 1.31e-14 | 58 |
myoblast | 1.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-14 | 58 |
electrically responsive cell | 1.65e-13 | 61 |
electrically active cell | 1.65e-13 | 61 |
somatic stem cell | 1.57e-11 | 433 |
aortic smooth muscle cell | 2.57e-11 | 10 |
multi fate stem cell | 5.40e-11 | 427 |
stem cell | 6.61e-11 | 441 |
fibroblast | 2.59e-09 | 76 |
fibroblast of tunica adventitia of artery | 1.31e-08 | 4 |
fibroblast of the aortic adventitia | 1.31e-08 | 4 |
smooth muscle cell of the umbilical artery | 9.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.20e-13 | 14 |
benign neoplasm | 8.69e-08 | 4 |
cell type benign neoplasm | 9.62e-07 | 3 |
leiomyoma | 9.62e-07 | 3 |