FFCP PHASE1:Hg19::chr6:133562472..133562530,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2070 | |EntrezGene=2070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3522 | |HGNC=3522 | ||
|TSSclassifier=strong | |||
|UniProt=O95677,E7ESD5,Q96CJ7 | |UniProt=O95677,E7ESD5,Q96CJ7 | ||
|association_with_transcript=0bp_to_ENST00000355167,ENST00000367895,ENST00000430974,ENST00000441015,NM_004100,NM_172103,NM_172105,uc003qec.3,uc003qed.3,uc003qee.3,uc011ecr.1_5end | |association_with_transcript=0bp_to_ENST00000355167,ENST00000367895,ENST00000430974,ENST00000441015,NM_004100,NM_172103,NM_172105,uc003qec.3,uc003qed.3,uc003qee.3,uc011ecr.1_5end | ||
|cluster_id=chr6:133562472..133562530,+ | |||
|coexpression_cluster_id=C4562 | |||
|description=CAGE_peak_1_at_EYA4_5end | |description=CAGE_peak_1_at_EYA4_5end | ||
|id=chr6:133562472..133562530,+ | |id=chr6:133562472..133562530,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.24e-14!115;UBERON:0000481!1.50e-12!347;UBERON:0000073!8.30e-10!94;UBERON:0001016!8.30e-10!94;UBERON:0000475!1.20e-09!365;UBERON:0002050!1.64e-09!605;UBERON:0005423!1.64e-09!605;UBERON:0000922!1.72e-09!612;UBERON:0000923!2.51e-09!604;UBERON:0005291!2.51e-09!604;UBERON:0006598!2.51e-09!604;UBERON:0002532!2.51e-09!604;UBERON:0000153!3.23e-09!129;UBERON:0007811!3.23e-09!129;UBERON:0003075!3.68e-09!86;UBERON:0007284!3.68e-09!86;UBERON:0001049!6.09e-09!57;UBERON:0005068!6.09e-09!57;UBERON:0006241!6.09e-09!57;UBERON:0007135!6.09e-09!57;UBERON:0002346!8.91e-09!90;UBERON:0000033!9.79e-09!123;UBERON:0005743!4.54e-08!86;UBERON:0001017!7.54e-08!82;UBERON:0004121!1.02e-07!169;UBERON:0002616!1.03e-07!59;UBERON:0000955!1.37e-07!69;UBERON:0006238!1.37e-07!69;UBERON:0000924!1.51e-07!173;UBERON:0006601!1.51e-07!173;UBERON:0000065!1.82e-07!53;UBERON:0000063!1.97e-07!97;UBERON:0008947!4.74e-07!38;UBERON:0003258!4.74e-07!38;UBERON:0000468!7.62e-07!659;UBERON:0001004!9.79e-07!72 | |ontology_enrichment_uberon=UBERON:0007023!5.24e-14!115;UBERON:0000481!1.50e-12!347;UBERON:0000073!8.30e-10!94;UBERON:0001016!8.30e-10!94;UBERON:0000475!1.20e-09!365;UBERON:0002050!1.64e-09!605;UBERON:0005423!1.64e-09!605;UBERON:0000922!1.72e-09!612;UBERON:0000923!2.51e-09!604;UBERON:0005291!2.51e-09!604;UBERON:0006598!2.51e-09!604;UBERON:0002532!2.51e-09!604;UBERON:0000153!3.23e-09!129;UBERON:0007811!3.23e-09!129;UBERON:0003075!3.68e-09!86;UBERON:0007284!3.68e-09!86;UBERON:0001049!6.09e-09!57;UBERON:0005068!6.09e-09!57;UBERON:0006241!6.09e-09!57;UBERON:0007135!6.09e-09!57;UBERON:0002346!8.91e-09!90;UBERON:0000033!9.79e-09!123;UBERON:0005743!4.54e-08!86;UBERON:0001017!7.54e-08!82;UBERON:0004121!1.02e-07!169;UBERON:0002616!1.03e-07!59;UBERON:0000955!1.37e-07!69;UBERON:0006238!1.37e-07!69;UBERON:0000924!1.51e-07!173;UBERON:0006601!1.51e-07!173;UBERON:0000065!1.82e-07!53;UBERON:0000063!1.97e-07!97;UBERON:0008947!4.74e-07!38;UBERON:0003258!4.74e-07!38;UBERON:0000468!7.62e-07!659;UBERON:0001004!9.79e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.94e-09;16!UBERON:0002036;5.94e-09;16!UBERON:0000065;4.83e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.23e-13,114;UBERON:0011216,6.22e-10,223;UBERON:0001016,1.09e-08,89;UBERON:0000065,6.11e-08,54;UBERON:0010314,7.82e-08,132;UBERON:0001004,2.11e-07,74;UBERON:0001049,5.33e-07,56;UBERON:0005068,5.33e-07,56;UBERON:0006241,5.33e-07,56;UBERON:0007135,5.33e-07,56;UBERON:0008947,7.45e-07,38;UBERON:0003258,7.45e-07,38;UBERON:0003075,9.21e-07,82;UBERON:0007284,9.21e-07,82;UBERON:0001017,9.75e-07,81 | |||
|phase1_expression=0.363356758541113,1.49870366723688,1.55049844505568,0,1.34088328328186,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,0.982935746006035,0,0,0,1.11389717664042,0.994192127183747,0,0,0,0,1.47745269692145,0.612002073732759,3.76145665773705,1.43117993565528,1.50561867580173,0.627713197974014,0,0,0,0,0,0,5.51652734687356,3.91567694411725,7.39508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,1.89069634328136,1.99556457716308,0.87834785693126,5.6975897841505,0,0,0,0,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,4.36950296683622,1.14734648299525,0,0.560677600142307,0,0.24666754841716,1.55605517699883,0.404132016209064,0,1.36221684880438,0,1.87457145467037,5.30672130611545,3.99330275081114,1.79338416662161,0.352303495931295,2.42809416552197,3.37081936085396,11.2284794190191,6.1417158655884,16.5321249881225,26.1360628602052,14.8360157567134,0,0,6.39677233025452,10.509955669245,5.81834642516784,2.19488810440419,4.59731693698529,16.2257103619125,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,1.28648187638577,0,0,0,8.28147600278907,7.41772636343647,7.23033089650446,6.94852028214082,9.80457498415828,6.40630671599961,7.14605933248871,9.61485179114196,6.92544882503503,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,2.93227474779292,4.15973914111831,0,0.463721619900307,1.17408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0.792435906119034,0,0,0,1.0159663086747,4.96584953225761,0,0,1.54241239054985,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.26593811658487,0,1.02882949704857,0,1.0656887160644,1.57275793023962,0,0,0.977208552881205,1.06617584622764,0,2.1100756394171,1.74306691720059,0,0,0,0,11.501993063596,24.1210065251639,2.85273810081437,5.50168965336801,7.60262393436419,8.59492623551499,0,0,0,0,7.87693335089637,2.60279707715243,0,0.837581326671744,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,1.62759014219841,3.95144636908534,5.70972764150918,24.2861719152259,25.7711112983969,3.61135319673263,0,2.0694614258501,0,1.65932251687533,3.0409265063829,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0.841980283299221,0.896974044789907,1.53512174720011,0.482561763430822,1.48418066444991,0.154209693802656,0.177561725313127,1.88892458831761,3.11552657510173,0.697262270759755,0,0.200506470303285,0.276242966807689,15.0406927095635,19.8479373127322,17.7017960195223,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0.9273691048295,20.8778379785823,22.1950554786382,0.574265537996172,0,0,5.12354806948246,5.85384745035649,4.60511024178389,3.30807773962873,8.27135885485707,8.41096824702525,4.85791776271775,5.07482603186403,4.13212288402445,3.65161127993702,16.8448780492851,6.2717824130441,0,0.62962469366128,1.3940745403212,0,0,2.60979897622522,0,0.143124886741991,1.48863347743867,2.21465597303108,0,3.32667128704734,16.6896205333229,2.54562598340749,0,3.05783177891635,4.94166653524899,3.65218447271628,0.404364963146632,0,1.68503382495592,2.43816869544795,0,0,5.86949619054339,16.1202192427233,0,0,0,0,3.47265320560013,5.9030527684197,0,0,0,0,0,0,7.09522128141196,0.211107635297664,2.30506425071931,0.379473173765715,4.19921664293979,8.85243437074711,5.3624182042863,5.44454924306613,1.12972560932135,1.72202149068492,0,2.66058092122005,1.60806380144872,0,0,0,0,0,0,0,0,0,8.66231869737023,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84652965180009,0,1.6227340708559,14.6551665919041,0,0,3.36968812325356,1.8204078262427,0,0,0,0,0,0,2.11004124615769,12.5778836675884,0,0,1.39473591775749,0.552567831062295,4.53478946137697,8.89737537768747,0,0,0,4.65455054156584,0,4.63624006493588,0,22.2273980289274,1.93866549219044,1.02044907978036,0,0,0,6.52499617891314,11.7207251734065,0,9.92828263425333,0,6.12369688104834,0.173624994933292,4.42870692906919,1.20596438625408,0,0.221158519862449,0.295547618953547,2.4132393686937,24.0754004376968,0,13.4662952381645,30.0807027436083,0.46112780877612,0,0.977826347298073,0.638002319463839,0,0,0,0,0,0,0,0,0,0,1.68798451622422,1.14262965711403,0,7.57360239097319,0,0.530745387020035,0,5.63390144493182,4.07760998523459,5.32551942477822,4.9876838405701,12.0386647094818,2.57690890297873,0,0,0,18.150882531072,1.20990716048664,0.30607276163049,2.40109002588254,10.8232861978435,10.1614427569302,17.2810006903868,8.60579085276297,16.0105788387685,15.5314158704846,15.9381345776684,0,0,0,0,2.79562669187248,0,20.7058548958642,28.2124763952676,20.3646333491959,1.93978032976839,0,1.58186518546373,7.8113897048648,3.97429223405979,2.34249945036751,36.763659954143,0,0.853811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| ||
|short_description=p1@EYA4 | |short_description=p1@EYA4 | ||
}} | }} |
Latest revision as of 20:39, 24 September 2015
Short description: | p1@EYA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EYA4_5end |
Coexpression cluster: | C4562_skeletal_leiomyoblastoma_migratory_pineal_merkel_rhabdomyosarcoma_gall |
Association with transcript: | 0bp_to_ENST00000355167, ENST00000367895, ENST00000430974, ENST00000441015, NM_004100, NM_172103, NM_172105, uc003qec.3, uc003qed.3, uc003qee.3, uc011ecr.1_5end |
EntrezGene: | EYA4 |
HGNC: | 3522 |
UniProt: | O95677E7ESD5Q96CJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.23e-13 | 114 |
organ system subdivision | 6.22e-10 | 223 |
nervous system | 1.09e-08 | 89 |
respiratory tract | 6.11e-08 | 54 |
structure with developmental contribution from neural crest | 7.82e-08 | 132 |
respiratory system | 2.11e-07 | 74 |
neural tube | 5.33e-07 | 56 |
neural rod | 5.33e-07 | 56 |
future spinal cord | 5.33e-07 | 56 |
neural keel | 5.33e-07 | 56 |
respiratory primordium | 7.45e-07 | 38 |
endoderm of foregut | 7.45e-07 | 38 |
neural plate | 9.21e-07 | 82 |
presumptive neural plate | 9.21e-07 | 82 |
central nervous system | 9.75e-07 | 81 |