FFCP PHASE1:Hg19::chr6:24522955..24522965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7915 | |EntrezGene=7915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=408 | |HGNC=408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000479394_5end | |association_with_transcript=89bp_to_ENST00000479394_5end | ||
|cluster_id=chr6:24522955..24522965,+ | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_14_at_ALDH5A1_5end | |description=CAGE_peak_14_at_ALDH5A1_5end | ||
|id=chr6:24522955..24522965,+ | |id=chr6:24522955..24522965,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.49e-21!5;CL:0000457!1.49e-21!5;CL:0002191!1.49e-21!5;CL:0000097!1.49e-21!5;CL:0000831!1.49e-21!5;CL:0002028!1.49e-21!5;CL:0000163!4.71e-12!9;CL:0001024!7.97e-08!1 | |ontology_enrichment_celltype=CL:0002274!1.49e-21!5;CL:0000457!1.49e-21!5;CL:0002191!1.49e-21!5;CL:0000097!1.49e-21!5;CL:0000831!1.49e-21!5;CL:0002028!1.49e-21!5;CL:0000163!4.71e-12!9;CL:0001024!7.97e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.35e-09;5!CL:0000945;1.19e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.49e-09,5;CL:0002028,3.49e-09,5;CL:0000945,1.19e-07,24;CL:0000826,1.19e-07,24;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!2.89e-08!1;DOID:0050619!1.11e-07!1;DOID:1357!1.11e-07!1;DOID:2531!3.74e-07!51;DOID:0060083!3.74e-07!51 | |ontology_enrichment_disease=DOID:12603!2.89e-08!1;DOID:0050619!1.11e-07!1;DOID:1357!1.11e-07!1;DOID:2531!3.74e-07!51;DOID:0060083!3.74e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:12603;9.91e-41;1!DOID:0060058;6.39e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.91e-41,1;DOID:0060058,6.39e-17,10;DOID:2531,8.01e-08,51;DOID:0060083,8.01e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.11e-07!1;UBERON:0001825!1.11e-07!1;UBERON:0002336!1.75e-07!1;UBERON:0001018!1.75e-07!1;UBERON:0002473!1.75e-07!1;UBERON:0005340!1.75e-07!1;UBERON:0002316!1.75e-07!1;UBERON:0003544!1.75e-07!1;UBERON:0001020!1.75e-07!1;UBERON:0005970!1.75e-07!1;UBERON:0002437!1.75e-07!1;UBERON:0002370!2.20e-07!4;UBERON:0005058!2.20e-07!4;UBERON:0009113!2.20e-07!4;UBERON:0003295!2.20e-07!4;UBERON:0005562!2.20e-07!4 | |ontology_enrichment_uberon=UBERON:0001764!1.11e-07!1;UBERON:0001825!1.11e-07!1;UBERON:0002336!1.75e-07!1;UBERON:0001018!1.75e-07!1;UBERON:0002473!1.75e-07!1;UBERON:0005340!1.75e-07!1;UBERON:0002316!1.75e-07!1;UBERON:0003544!1.75e-07!1;UBERON:0001020!1.75e-07!1;UBERON:0005970!1.75e-07!1;UBERON:0002437!1.75e-07!1;UBERON:0002370!2.20e-07!4;UBERON:0005058!2.20e-07!4;UBERON:0009113!2.20e-07!4;UBERON:0003295!2.20e-07!4;UBERON:0005562!2.20e-07!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p14@ALDH5A1 | |short_description=p14@ALDH5A1 | ||
}} | }} |
Latest revision as of 06:04, 17 September 2015
Short description: | p14@ALDH5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ALDH5A1_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 89bp_to_ENST00000479394_5end |
EntrezGene: | ALDH5A1 |
HGNC: | 408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.49e-09 | 5 |
basophil mast progenitor cell | 3.49e-09 | 5 |
lymphocyte of B lineage | 1.19e-07 | 24 |
pro-B cell | 1.19e-07 | 24 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.91e-41 | 1 |
lymphoma | 6.39e-17 | 10 |
hematologic cancer | 8.01e-08 | 51 |
immune system cancer | 8.01e-08 | 51 |