FFCP PHASE1:Hg19::chr6:35214004..35214032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:35214004..35214032,+ | |||
|coexpression_cluster_id=C519 | |||
|description=CAGE_peak_at_chr6:35214004..35214032,+ | |description=CAGE_peak_at_chr6:35214004..35214032,+ | ||
|id=chr6:35214004..35214032,+ | |id=chr6:35214004..35214032,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.82e-15!12;CL:0000055!3.38e-15!180;CL:0000057!1.62e-14!75;CL:0000499!4.34e-12!27;CL:0002620!1.65e-11!23;CL:0000048!9.95e-10!430;CL:0002320!2.50e-09!365;CL:0000723!2.71e-09!436;CL:0000034!3.59e-09!444;CL:0000136!9.39e-09!15;CL:0000134!5.50e-08!358;CL:0000188!4.74e-07!9;CL:0000219!5.73e-07!390;CL:0002580!6.46e-07!3 | |ontology_enrichment_celltype=CL:0002334!2.82e-15!12;CL:0000055!3.38e-15!180;CL:0000057!1.62e-14!75;CL:0000499!4.34e-12!27;CL:0002620!1.65e-11!23;CL:0000048!9.95e-10!430;CL:0002320!2.50e-09!365;CL:0000723!2.71e-09!436;CL:0000034!3.59e-09!444;CL:0000136!9.39e-09!15;CL:0000134!5.50e-08!358;CL:0000188!4.74e-07!9;CL:0000219!5.73e-07!390;CL:0002580!6.46e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.14e-42;12!CL:0002580;5.79e-20;3!CL:0002583;2.70e-14;2!CL:0002617;1.23e-13;2!CL:0000136;5.84e-12;13!CL:0002582;8.02e-10;3!CL:0002579;4.53e-09;3!CL:0002616;2.04e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.74e-42,12;CL:0002580,4.63e-20,3;CL:0000136,1.63e-14,15;CL:0002583,2.88e-14,2;CL:0000057,1.37e-13,76;CL:0002617,1.86e-13,2;CL:0002582,8.38e-10,3;CL:0002579,3.12e-09,3;CL:0000134,9.07e-08,354;CL:0002616,1.48e-07,1;CL:0002320,1.62e-07,361;CL:0000219,2.10e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;1.89e-09;3!DOID:3369;5.22e-08;1!DOID:4235;5.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,2.14e-09,3;DOID:3369,4.89e-08,1;DOID:4235,5.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.17e-11!6;UBERON:0002358!5.17e-11!6;UBERON:0003684!5.17e-11!6;UBERON:0001178!5.17e-11!6;UBERON:0004457!1.23e-10!12;UBERON:0000042!1.23e-10!12;UBERON:0002384!1.37e-09!375;UBERON:0002199!3.07e-09!45;UBERON:0002416!3.07e-09!45;UBERON:0004905!7.90e-08!5;UBERON:0000982!7.90e-08!5;UBERON:0004770!7.90e-08!5;UBERON:0002097!4.42e-07!40 | |ontology_enrichment_uberon=UBERON:0003688!5.17e-11!6;UBERON:0002358!5.17e-11!6;UBERON:0003684!5.17e-11!6;UBERON:0001178!5.17e-11!6;UBERON:0004457!1.23e-10!12;UBERON:0000042!1.23e-10!12;UBERON:0002384!1.37e-09!375;UBERON:0002199!3.07e-09!45;UBERON:0002416!3.07e-09!45;UBERON:0004905!7.90e-08!5;UBERON:0000982!7.90e-08!5;UBERON:0004770!7.90e-08!5;UBERON:0002097!4.42e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;7.73e-16;10!UBERON:0001443;2.21e-14;11!UBERON:0002072;2.14e-12;5!UBERON:0004457;3.67e-11;9!UBERON:0000042;3.67e-11;9!UBERON:0003688;7.43e-10;6!UBERON:0002358;7.43e-10;6!UBERON:0003684;7.43e-10;6!UBERON:0001178;7.43e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,8.50e-16,10;UBERON:0001443,2.41e-14,11;UBERON:0002072,2.27e-12,5;UBERON:0003688,6.28e-10,6;UBERON:0002358,6.28e-10,6;UBERON:0003684,6.28e-10,6;UBERON:0001178,6.28e-10,6;UBERON:0004457,2.08e-08,12;UBERON:0000042,2.08e-08,12;UBERON:0002384,4.84e-08,371 | |||
|phase1_expression=1.09007027562334,3.8538094300377,0.704772020479856,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.45071417671979,0,1.25572744982203,0.427114777637135,0,1.50045548042201,0.103052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.487185025805993,0.504867548488229,0,0,2.84007674013291,0.503760491138201,0.847802961552438,0,0,0,0,0.132529768321485,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,2.89562613335158,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0.117141414992713,0.300946099727719,0,0,1.32845119707087,1.47495334833363,0.260650843404249,0,0,0,0,0,0,0,0,2.97729369382532,2.30192959932094,3.92924132206303,0.640695746278505,1.53512174720011,1.93024705372329,0,7.24785560872481,3.55123450626254,3.6135948646076,0,7.08883308605751,0,0,0,0.114814448164607,1.63882051206045,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,1.30634944043764,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0.705797459094515,0,0,0.298509605773748,0,0.554805861502613,0,0.251567901752575,2.66943366478961,0,0,0,0,0,0,0,0.829412415681711,0.53168342911599,0,0,0,0,0,0,0,0.398095888698616,0,1.71697852591396,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,4.75795921125887,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0.743990036333503,0.462175628631418,4.32626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.25458863311266,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.09007027562334,3.8538094300377,0.704772020479856,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.45071417671979,0,1.25572744982203,0.427114777637135,0,1.50045548042201,0.103052529238439,0.515281080091258,0.18611685633159,0.675105328965065,0.487185025805993,0.504867548488229,0,0,2.84007674013291,0.503760491138201,0.847802961552438,0,0,0,0,0.132529768321485,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,2.89562613335158,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0.117141414992713,0.300946099727719,0,0,1.32845119707087,1.47495334833363,0.260650843404249,0,0,0,0,0,0,0,0,2.97729369382532,2.30192959932094,3.92924132206303,0.640695746278505,1.53512174720011,1.93024705372329,0,7.24785560872481,3.55123450626254,3.6135948646076,0,7.08883308605751,0,0,0,0.114814448164607,1.63882051206045,0.524497659837696,0,0,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0,0.170453254832202,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,1.30634944043764,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0.705797459094515,0,0,0.298509605773748,0,0.554805861502613,0,0.251567901752575,2.66943366478961,0,0,0,0,0,0,0,0.829412415681711,0.53168342911599,0,0,0,0,0,0,0,0.398095888698616,0,1.71697852591396,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,4.75795921125887,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0.743990036333503,0.462175628631418,4.32626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.25458863311266,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:35214004..35214032,+ | |short_description=p@chr6:35214004..35214032,+ | ||
}} | }} |
Latest revision as of 00:58, 31 July 2015
Short description: | p@chr6:35214004..35214032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35214004..35214032, + |
Coexpression cluster: | C519_Preadipocyte_Ewing_Myoblast_spindle_Fibroblast_Adipocyte_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.74e-42 | 12 |
preadipocyte of the breast | 4.63e-20 | 3 |
fat cell | 1.63e-14 | 15 |
subcutaneous preadipocyte | 2.88e-14 | 2 |
fibroblast | 1.37e-13 | 76 |
adipocyte of breast | 1.86e-13 | 2 |
visceral preadipocyte | 8.38e-10 | 3 |
omentum preadipocyte | 3.12e-09 | 3 |
mesenchymal cell | 9.07e-08 | 354 |
perirenal adipocyte cell | 1.48e-07 | 1 |
connective tissue cell | 1.62e-07 | 361 |
motile cell | 2.10e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
breast | 8.50e-16 | 10 |
chest | 2.41e-14 | 11 |
hypodermis | 2.27e-12 | 5 |
omentum | 6.28e-10 | 6 |
peritoneum | 6.28e-10 | 6 |
abdominal cavity | 6.28e-10 | 6 |
visceral peritoneum | 6.28e-10 | 6 |
cavity lining | 2.08e-08 | 12 |
serous membrane | 2.08e-08 | 12 |
connective tissue | 4.84e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 2.14e-09 | 3 |
peripheral primitive neuroectodermal tumor | 4.89e-08 | 1 |
spindle cell sarcoma | 5.22e-08 | 1 |