FFCP PHASE1:Hg19::chr6:52441770..52441784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9697 | |EntrezGene=9697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16855 | |HGNC=16855 | ||
|TSSclassifier=strong | |||
|UniProt=Q15035 | |UniProt=Q15035 | ||
|association_with_transcript=-57bp_to_ENST00000182527_5end | |association_with_transcript=-57bp_to_ENST00000182527_5end | ||
|cluster_id=chr6:52441770..52441784,- | |||
|coexpression_cluster_id=C4613 | |||
|description=CAGE_peak_2_at_TRAM2_5end | |description=CAGE_peak_2_at_TRAM2_5end | ||
|id=chr6:52441770..52441784,- | |id=chr6:52441770..52441784,- | ||
|ontology_enrichment_celltype=CL:0000055!2.43e-45!180;CL:0000057!5.61e-30!75;CL:0000222!3.64e-20!119;CL:0000144!2.14e-16!625;CL:0002371!1.60e-15!591;CL:0000680!8.50e-15!57;CL:0000056!8.50e-15!57;CL:0000355!8.50e-15!57;CL:0002620!1.05e-13!23;CL:0000183!1.12e-13!59;CL:0000187!2.94e-13!54;CL:0000548!1.74e-12!679;CL:0000004!1.74e-12!679;CL:0000255!1.74e-12!679;CL:0000048!2.45e-12!430;CL:0000012!4.70e-12!682;CL:0000220!6.80e-12!246;CL:0000723!2.48e-11!436;CL:0002321!2.50e-11!248;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000393!1.75e-10!60;CL:0000211!1.75e-10!60;CL:0000034!4.27e-10!444;CL:0000359!5.98e-08!32;CL:0002334!9.32e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.43e-45!180;CL:0000057!5.61e-30!75;CL:0000222!3.64e-20!119;CL:0000144!2.14e-16!625;CL:0002371!1.60e-15!591;CL:0000680!8.50e-15!57;CL:0000056!8.50e-15!57;CL:0000355!8.50e-15!57;CL:0002620!1.05e-13!23;CL:0000183!1.12e-13!59;CL:0000187!2.94e-13!54;CL:0000548!1.74e-12!679;CL:0000004!1.74e-12!679;CL:0000255!1.74e-12!679;CL:0000048!2.45e-12!430;CL:0000012!4.70e-12!682;CL:0000220!6.80e-12!246;CL:0000723!2.48e-11!436;CL:0002321!2.50e-11!248;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000393!1.75e-10!60;CL:0000211!1.75e-10!60;CL:0000034!4.27e-10!444;CL:0000359!5.98e-08!32;CL:0002334!9.32e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.41e-17;23!CL:0000057;1.90e-14;73!CL:0002320;6.20e-11;188!CL:0000192;2.05e-09;43!CL:0000187;2.16e-09;55!CL:0000134;3.26e-09;55!CL:0000359;2.54e-08;32!CL:0002334;5.28e-08;12!CL:0000723;8.47e-08;61!CL:0000048;1.42e-07;58!CL:0002494;2.24e-07;16!CL:0000393;5.88e-07;61!CL:0000211;5.88e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.45e-36,76;CL:0000048,4.15e-21,427;CL:0000222,1.74e-20,121;CL:0000723,7.39e-20,433;CL:0000034,2.89e-18,441;CL:0000680,6.16e-18,58;CL:0000056,6.16e-18,58;CL:0000355,6.16e-18,58;CL:0002620,9.73e-17,23;CL:0000187,5.02e-16,55;CL:0000192,7.68e-13,43;CL:0000514,7.68e-13,43;CL:0000393,9.28e-13,61;CL:0000211,9.28e-13,61;CL:0002320,1.46e-10,361;CL:0002321,3.89e-10,250;CL:0000359,9.24e-09,32;CL:0000134,1.85e-08,354;CL:0000219,2.11e-08,386;CL:0002334,4.61e-08,12;CL:0002494,1.26e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;4.85e-10;58!CL:0000514;2.05e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.39e-20!83;UBERON:0002329!5.39e-20!83;UBERON:0003077!5.39e-20!83;UBERON:0003059!5.39e-20!83;UBERON:0007282!5.39e-20!83;UBERON:0009618!5.39e-20!83;UBERON:0007285!5.39e-20!83;UBERON:0004290!7.25e-18!70;UBERON:0000486!3.92e-15!82;UBERON:0005256!4.43e-15!143;UBERON:0002049!6.57e-15!79;UBERON:0007798!6.57e-15!79;UBERON:0002385!1.64e-13!63;UBERON:0001015!1.64e-13!63;UBERON:0000383!1.64e-13!63;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0004872!8.22e-13!84;UBERON:0000490!2.35e-12!138;UBERON:0000055!4.33e-12!69;UBERON:0002199!3.53e-11!45;UBERON:0002416!3.53e-11!45;UBERON:0001981!6.48e-11!60;UBERON:0007500!6.48e-11!60;UBERON:0004537!6.48e-11!60;UBERON:0006965!6.48e-11!60;UBERON:0001637!1.95e-10!42;UBERON:0003509!1.95e-10!42;UBERON:0004572!1.95e-10!42;UBERON:0004535!2.54e-10!110;UBERON:0002100!2.74e-10!216;UBERON:0003914!2.92e-10!118;UBERON:0002097!9.05e-10!40;UBERON:0001009!1.56e-09!113;UBERON:0003102!1.95e-09!95;UBERON:0000475!4.40e-09!365;UBERON:0004573!9.81e-09!33;UBERON:0004571!9.81e-09!33 | |ontology_enrichment_uberon=UBERON:0000914!5.39e-20!83;UBERON:0002329!5.39e-20!83;UBERON:0003077!5.39e-20!83;UBERON:0003059!5.39e-20!83;UBERON:0007282!5.39e-20!83;UBERON:0009618!5.39e-20!83;UBERON:0007285!5.39e-20!83;UBERON:0004290!7.25e-18!70;UBERON:0000486!3.92e-15!82;UBERON:0005256!4.43e-15!143;UBERON:0002049!6.57e-15!79;UBERON:0007798!6.57e-15!79;UBERON:0002385!1.64e-13!63;UBERON:0001015!1.64e-13!63;UBERON:0000383!1.64e-13!63;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0004872!8.22e-13!84;UBERON:0000490!2.35e-12!138;UBERON:0000055!4.33e-12!69;UBERON:0002199!3.53e-11!45;UBERON:0002416!3.53e-11!45;UBERON:0001981!6.48e-11!60;UBERON:0007500!6.48e-11!60;UBERON:0004537!6.48e-11!60;UBERON:0006965!6.48e-11!60;UBERON:0001637!1.95e-10!42;UBERON:0003509!1.95e-10!42;UBERON:0004572!1.95e-10!42;UBERON:0004535!2.54e-10!110;UBERON:0002100!2.74e-10!216;UBERON:0003914!2.92e-10!118;UBERON:0002097!9.05e-10!40;UBERON:0001009!1.56e-09!113;UBERON:0003102!1.95e-09!95;UBERON:0000475!4.40e-09!365;UBERON:0004573!9.81e-09!33;UBERON:0004571!9.81e-09!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.70e-10;41!UBERON:0002384;1.78e-10;198!UBERON:0002199;8.55e-10;46!UBERON:0002416;8.55e-10;46!UBERON:0001637;1.31e-09;42!UBERON:0003509;1.31e-09;42!UBERON:0004572;1.31e-09;42!UBERON:0004573;9.94e-09;33!UBERON:0004571;9.94e-09;33!UBERON:0003102;2.57e-08;50!UBERON:0002067;1.37e-07;9!UBERON:0002204;3.33e-07;70!UBERON:0001434;4.28e-07;36!UBERON:0002049;4.71e-07;75!UBERON:0007798;4.71e-07;75!UBERON:0007500;5.68e-07;56!UBERON:0001981;5.68e-07;56!UBERON:0004537;5.68e-07;56!UBERON:0000055;8.06e-07;65 | |||
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| ||
|short_description=p2@TRAM2 | |short_description=p2@TRAM2 | ||
}} | }} |
Latest revision as of 06:11, 19 September 2015
Short description: | p2@TRAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAM2_5end |
Coexpression cluster: | C4613_pleomorphic_Fibroblast_mesodermal_Nucleus_Smooth_thyroid_hepatic |
Association with transcript: | -57bp_to_ENST00000182527_5end |
EntrezGene: | TRAM2 |
HGNC: | 16855 |
UniProt: | Q15035 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.45e-36 | 76 |
multi fate stem cell | 4.15e-21 | 427 |
mesodermal cell | 1.74e-20 | 121 |
somatic stem cell | 7.39e-20 | 433 |
stem cell | 2.89e-18 | 441 |
muscle precursor cell | 6.16e-18 | 58 |
myoblast | 6.16e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.16e-18 | 58 |
skin fibroblast | 9.73e-17 | 23 |
muscle cell | 5.02e-16 | 55 |
smooth muscle cell | 7.68e-13 | 43 |
smooth muscle myoblast | 7.68e-13 | 43 |
electrically responsive cell | 9.28e-13 | 61 |
electrically active cell | 9.28e-13 | 61 |
connective tissue cell | 1.46e-10 | 361 |
embryonic cell | 3.89e-10 | 250 |
vascular associated smooth muscle cell | 9.24e-09 | 32 |
mesenchymal cell | 1.85e-08 | 354 |
motile cell | 2.11e-08 | 386 |
preadipocyte | 4.61e-08 | 12 |
cardiocyte | 1.26e-07 | 16 |