FFCP PHASE1:Hg19::chr7:141438347..141438356,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6742 | |EntrezGene=6742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11317 | |HGNC=11317 | ||
|TSSclassifier=strong | |||
|UniProt=Q04837 | |UniProt=Q04837 | ||
|association_with_transcript=-43bp_to_ENST00000484178_5end | |association_with_transcript=-43bp_to_ENST00000484178_5end | ||
|cluster_id=chr7:141438347..141438356,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_4_at_SSBP1_5end | |description=CAGE_peak_4_at_SSBP1_5end | ||
|id=chr7:141438347..141438356,+ | |id=chr7:141438347..141438356,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.88e-19;2!CL:0001016;1.88e-19;2!CL:0000945;1.72e-09;24!CL:0000453;2.49e-08;5!CL:0000840;4.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.80e-19,2;CL:0001016,1.80e-19,2;CL:0000945,1.68e-09,24;CL:0000826,1.68e-09,24;CL:0000453,2.45e-08,5;CL:0000840,4.39e-07,5;CL:0001029,4.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;6.72e-11;1!DOID:4549;6.72e-11;1!DOID:5861;6.72e-11;1!DOID:6496;6.72e-11;1!DOID:630;9.37e-11;1!DOID:0050177;9.37e-11;1!DOID:0050427;9.37e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.73e-11,1;DOID:4549,6.73e-11,1;DOID:5861,6.73e-11,1;DOID:6496,6.73e-11,1;DOID:630,9.84e-11,1;DOID:0050177,9.84e-11,1;DOID:0050427,9.84e-11,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.38e-10;1!UBERON:0001301;2.38e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.30e-10,1;UBERON:0001301,4.33e-10,1 | |||
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| ||
|short_description=p4@SSBP1 | |short_description=p4@SSBP1 | ||
}} | }} |
Latest revision as of 18:51, 16 September 2015
Short description: | p4@SSBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SSBP1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -43bp_to_ENST00000484178_5end |
EntrezGene: | SSBP1 |
HGNC: | 11317 |
UniProt: | Q04837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.80e-19 | 2 |
immature CD1a-positive Langerhans cell | 1.80e-19 | 2 |
lymphocyte of B lineage | 1.68e-09 | 24 |
pro-B cell | 1.68e-09 | 24 |
Langerhans cell | 2.45e-08 | 5 |
immature conventional dendritic cell | 4.39e-07 | 5 |
common dendritic progenitor | 4.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.30e-10 | 1 |
epididymis | 4.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.73e-11 | 1 |
extraosseous chondrosarcoma | 6.73e-11 | 1 |
myxoid chondrosarcoma | 6.73e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 6.73e-11 | 1 |
genetic disease | 9.84e-11 | 1 |
monogenic disease | 9.84e-11 | 1 |
xeroderma pigmentosum | 9.84e-11 | 1 |