FFCP PHASE1:Hg19::chr7:150553996..150554012,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=437bp_to_CU680774,JF432306_5end | |association_with_transcript=437bp_to_CU680774,JF432306_5end | ||
|cluster_id=chr7:150553996..150554012,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_7_at_ABP1_5end | |description=CAGE_peak_7_at_ABP1_5end | ||
|id=chr7:150553996..150554012,+ | |id=chr7:150553996..150554012,+ | ||
|ontology_enrichment_celltype=CL:0000453!2.19e-27!5;CL:0002541!8.05e-27!3;CL:0000990!2.47e-15!8;CL:0000451!1.39e-12!10 | |ontology_enrichment_celltype=CL:0000453!2.19e-27!5;CL:0002541!8.05e-27!3;CL:0000990!2.47e-15!8;CL:0000451!1.39e-12!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.29e-51;3!CL:0000453;1.82e-30;5!CL:0000990;2.91e-17;8!CL:0000451;3.01e-14;10!CL:0000349;1.30e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.78e-51,3;CL:0000453,1.73e-30,5;CL:0000990,2.83e-17,8;CL:0000451,2.95e-14,10;CL:0000349,1.28e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.33e-17;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!8.05e-27!3;UBERON:0000920!8.05e-27!3;UBERON:0003124!4.59e-20!7;UBERON:0005631!3.47e-15!14;UBERON:0000158!3.47e-15!14;UBERON:0005409!1.53e-10!35;UBERON:0000160!2.87e-10!27;UBERON:0004913!2.46e-09!1;UBERON:0003703!2.46e-09!1;UBERON:0001174!2.46e-09!1;UBERON:0004914!2.46e-09!1;UBERON:0000478!8.69e-09!24 | |ontology_enrichment_uberon=UBERON:0000476!8.05e-27!3;UBERON:0000920!8.05e-27!3;UBERON:0003124!4.59e-20!7;UBERON:0005631!3.47e-15!14;UBERON:0000158!3.47e-15!14;UBERON:0005409!1.53e-10!35;UBERON:0000160!2.87e-10!27;UBERON:0004913!2.46e-09!1;UBERON:0003703!2.46e-09!1;UBERON:0001174!2.46e-09!1;UBERON:0004914!2.46e-09!1;UBERON:0000478!8.69e-09!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.29e-51;3!UBERON:0000920;6.29e-51;3!UBERON:0005631;8.03e-16;10!UBERON:0000158;8.03e-16;10!UBERON:0002108;3.84e-14;4!UBERON:0000478;1.77e-11;24!UBERON:0000160;7.97e-09;17!UBERON:0005409;5.04e-07;22!UBERON:0002114;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.78e-51,3;UBERON:0003124,1.91e-38,7;UBERON:0005631,1.83e-19,14;UBERON:0000158,1.83e-19,14;UBERON:0002108,4.39e-14,4;UBERON:0000478,1.67e-11,24;UBERON:0000160,8.30e-09,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46601623624687,7.14461228534526,18.1231823846336,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.394028536495991,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,4.25167489002762,2.45348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95145214357805,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,3.31848879864162,0,2.35158648180761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46601623624687,7.14461228534526,18.1231823846336,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.394028536495991,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,4.25167489002762,2.45348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95145214357805,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,3.31848879864162,0,2.35158648180761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@ABP1 | |short_description=p7@ABP1 | ||
}} | }} |
Latest revision as of 04:22, 17 September 2015
Short description: | p7@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 437bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.78e-51 | 3 |
Langerhans cell | 1.73e-30 | 5 |
conventional dendritic cell | 2.83e-17 | 8 |
dendritic cell | 2.95e-14 | 10 |
extraembryonic cell | 1.28e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.78e-51 | 3 |
chorion | 1.91e-38 | 7 |
extraembryonic membrane | 1.83e-19 | 14 |
membranous layer | 1.83e-19 | 14 |
small intestine | 4.39e-14 | 4 |
extraembryonic structure | 1.67e-11 | 24 |
intestine | 8.30e-09 | 17 |