FFCP PHASE1:Hg19::chr7:80373118..80373135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=384bp_to_D32000_5end | |association_with_transcript=384bp_to_D32000_5end | ||
|cluster_id=chr7:80373118..80373135,- | |||
|coexpression_cluster_id=C1439 | |||
|description=CAGE_peak_21_at_SEMA3C_5end | |description=CAGE_peak_21_at_SEMA3C_5end | ||
|id=chr7:80373118..80373135,- | |id=chr7:80373118..80373135,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.01e-59;3!CL:0000388;2.01e-59;3!CL:0000214;8.11e-28;3!CL:0000499;1.88e-25;28!CL:0000153;1.12e-20;9!CL:0000447;1.12e-20;9!CL:0000327;1.09e-12;15!CL:0002541;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.22e-59,3;CL:0000388,1.22e-59,3;CL:0000214,8.12e-28,3;CL:0000499,1.52e-25,28;CL:0000153,9.50e-21,9;CL:0000447,9.50e-21,9;CL:0000327,9.83e-13,15;CL:0002541,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.78e-09!14 | |ontology_enrichment_disease=DOID:2394!9.78e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:6193;4.66e-21;1!DOID:3350;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,9.43e-21,1;DOID:3350,4.52e-11,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.01e-59;3!UBERON:0000043;2.01e-59;3!UBERON:0007845;2.01e-59;3!UBERON:0006915;8.11e-28;3!UBERON:0007616;8.11e-28;3!UBERON:0002217;8.11e-28;3!UBERON:0002018;8.11e-28;3!UBERON:0004905;4.43e-11;8!UBERON:0000982;4.43e-11;8!UBERON:0004770;4.43e-11;8!UBERON:0004457;5.93e-10;9!UBERON:0000042;5.93e-10;9!UBERON:0003124;6.56e-08;3!UBERON:0000920;6.56e-08;3!UBERON:0000486;1.09e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.22e-59,3;UBERON:0000043,1.22e-59,3;UBERON:0007845,1.22e-59,3;UBERON:0006915,8.12e-28,3;UBERON:0007616,8.12e-28,3;UBERON:0002217,8.12e-28,3;UBERON:0002018,8.12e-28,3;UBERON:0004905,4.43e-11,8;UBERON:0000982,4.43e-11,8;UBERON:0004770,4.43e-11,8;UBERON:0000920,7.76e-08,3;UBERON:0004457,1.09e-07,12;UBERON:0000042,1.09e-07,12 | |||
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| ||
|short_description=p21@SEMA3C | |short_description=p21@SEMA3C | ||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p21@SEMA3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SEMA3C_5end |
Coexpression cluster: | C1439_Synoviocyte_Fibroblast_heart_mesenchymal_Chondrocyte_Hep2_Myoblast |
Association with transcript: | 384bp_to_D32000_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.22e-59 | 3 |
tendon cell | 1.22e-59 | 3 |
synovial cell | 8.12e-28 | 3 |
stromal cell | 1.52e-25 | 28 |
GAG secreting cell | 9.50e-21 | 9 |
carbohydrate secreting cell | 9.50e-21 | 9 |
extracellular matrix secreting cell | 9.83e-13 | 15 |
chorionic membrane mesenchymal stem cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.22e-59 | 3 |
tendon | 1.22e-59 | 3 |
regular connective tissue | 1.22e-59 | 3 |
stratified squamous epithelium | 8.12e-28 | 3 |
layer of synovial tissue | 8.12e-28 | 3 |
synovial joint | 8.12e-28 | 3 |
synovial membrane of synovial joint | 8.12e-28 | 3 |
articulation | 4.43e-11 | 8 |
skeletal joint | 4.43e-11 | 8 |
articular system | 4.43e-11 | 8 |
egg chorion | 7.76e-08 | 3 |
cavity lining | 1.09e-07 | 12 |
serous membrane | 1.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.43e-21 | 1 |
mesenchymal cell neoplasm | 4.52e-11 | 2 |