FFCP PHASE1:Hg19::chr16:70732811..70732824,-: Difference between revisions
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|id=chr16:70732811..70732824,-
|short_description=p@chr16:70732811..70732824,-
|description=CAGE_peak_at_chr16:70732811..70732824,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:70732811..70732824,- | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_at_chr16:70732811..70732824,- | |||
|id=chr16:70732811..70732824,- | |||
|ontology_enrichment_celltype=CL:0000188!1.91e-52!9;CL:0000594!3.87e-23!3;CL:0000515!1.24e-17!4;CL:0000680!4.37e-14!57;CL:0000056!4.37e-14!57;CL:0000355!4.37e-14!57;CL:0000035!6.77e-13!20;CL:0000183!5.17e-09!59;CL:0000187!7.57e-08!54;CL:0000055!1.73e-07!180;CL:0000393!5.95e-07!60;CL:0000211!5.95e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.16e-58;9!CL:0002575;6.48e-18;2!CL:0000632;2.89e-12;3!CL:0000594;2.89e-12;3!CL:0000187;8.30e-10;55!CL:0000669;1.22e-09;4!CL:0000393;4.55e-07;61!CL:0000211;4.55e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.17e-58,9;CL:0002575,6.48e-18,2;CL:0000594,2.59e-12,3;CL:0000632,2.89e-12,3;CL:0000187,3.53e-10,55;CL:0000680,1.11e-09,58;CL:0000056,1.11e-09,58;CL:0000355,1.11e-09,58;CL:0000669,1.22e-09,4;CL:0000393,3.14e-09,61;CL:0000211,3.14e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000355;8.29e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.50e-15!61;UBERON:0002036!1.50e-15!61;UBERON:0003082!1.50e-15!61;UBERON:0002385!5.49e-15!63;UBERON:0001015!5.49e-15!63;UBERON:0000383!5.49e-15!63;UBERON:0004290!2.84e-13!70;UBERON:0000914!7.84e-13!83;UBERON:0002329!7.84e-13!83;UBERON:0003077!7.84e-13!83;UBERON:0003059!7.84e-13!83;UBERON:0007282!7.84e-13!83;UBERON:0009618!7.84e-13!83;UBERON:0007285!7.84e-13!83;UBERON:0000486!5.13e-11!82;UBERON:0000490!2.34e-09!138;UBERON:0005256!5.98e-09!143;UBERON:0000997!9.02e-09!1;UBERON:0005056!9.02e-09!1;UBERON:0002204!3.79e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.21e-33;16!UBERON:0002036;2.21e-33;16!UBERON:0002385;1.19e-16;31!UBERON:0001015;1.19e-16;31!UBERON:0000383;1.19e-16;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.34e-09,62;UBERON:0002036,4.34e-09,62;UBERON:0003082,4.34e-09,62;UBERON:0002385,8.04e-09,64;UBERON:0001015,8.04e-09,64;UBERON:0000383,8.04e-09,64;UBERON:0002329,5.32e-08,71;UBERON:0003059,5.32e-08,71;UBERON:0007282,5.32e-08,71;UBERON:0004290,5.32e-08,71;UBERON:0009618,5.32e-08,71;UBERON:0003077,6.76e-08,72;UBERON:0007285,6.76e-08,72;UBERON:0007524,8.54e-08,73;UBERON:0007503,2.52e-07,78;UBERON:0005256,3.45e-07,122;UBERON:0000486,6.53e-07,83 | |||
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|short_description=p@chr16:70732811..70732824,- | |||
}} | }} |
Latest revision as of 12:01, 25 July 2015
Short description: | p@chr16:70732811..70732824, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:70732811..70732824, - |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.17e-58 | 9 |
central nervous system pericyte | 6.48e-18 | 2 |
skeletal muscle satellite cell | 2.59e-12 | 3 |
hepatic stellate cell | 2.89e-12 | 3 |
muscle cell | 3.53e-10 | 55 |
muscle precursor cell | 1.11e-09 | 58 |
myoblast | 1.11e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-09 | 58 |
pericyte cell | 1.22e-09 | 4 |
electrically responsive cell | 3.14e-09 | 61 |
electrically active cell | 3.14e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.34e-09 | 62 |
striated muscle tissue | 4.34e-09 | 62 |
myotome | 4.34e-09 | 62 |
muscle tissue | 8.04e-09 | 64 |
musculature | 8.04e-09 | 64 |
musculature of body | 8.04e-09 | 64 |
somite | 5.32e-08 | 71 |
presomitic mesoderm | 5.32e-08 | 71 |
presumptive segmental plate | 5.32e-08 | 71 |
dermomyotome | 5.32e-08 | 71 |
trunk paraxial mesoderm | 5.32e-08 | 71 |
paraxial mesoderm | 6.76e-08 | 72 |
presumptive paraxial mesoderm | 6.76e-08 | 72 |
dense mesenchyme tissue | 8.54e-08 | 73 |
epithelial vesicle | 2.52e-07 | 78 |
trunk mesenchyme | 3.45e-07 | 122 |
multilaminar epithelium | 6.53e-07 | 83 |