FFCP PHASE1:Hg19::chr10:73637839..73637853,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-260bp_to_ENST00000441348_5end | |association_with_transcript=-260bp_to_ENST00000441348_5end | ||
|cluster_id=chr10:73637839..73637853,+ | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_1_at_ENST00000441348_5end | |description=CAGE_peak_1_at_ENST00000441348_5end | ||
|id=chr10:73637839..73637853,+ | |id=chr10:73637839..73637853,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.21e-08!25;CL:0000827!1.21e-08!25 | |ontology_enrichment_celltype=CL:0000084!1.21e-08!25;CL:0000827!1.21e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.23e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.23e-12,25;CL:0000827,1.23e-12,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!5.13e-23!1;DOID:1357!5.13e-23!1;DOID:2531!2.32e-07!51;DOID:0060083!2.32e-07!51 | |ontology_enrichment_disease=DOID:0050619!5.13e-23!1;DOID:1357!5.13e-23!1;DOID:2531!2.32e-07!51;DOID:0060083!2.32e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:2531;3.84e-08;51!DOID:0060083;3.84e-08;51!DOID:1240;7.74e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.89e-11,51;DOID:0060083,5.89e-11,51;DOID:1240,2.30e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.08e-29!7;UBERON:0001764!5.13e-23!1;UBERON:0001825!5.13e-23!1;UBERON:0002370!5.14e-23!4;UBERON:0005058!5.14e-23!4;UBERON:0009113!5.14e-23!4;UBERON:0003295!5.14e-23!4;UBERON:0005562!5.14e-23!4;UBERON:0000974!1.91e-20!10;UBERON:0003351!1.05e-15!6;UBERON:0000341!2.90e-12!2;UBERON:0003408!8.09e-10!10;UBERON:0001042!8.09e-10!10;UBERON:0009145!8.09e-10!10;UBERON:0006562!5.20e-09!11;UBERON:0009722!5.20e-09!11;UBERON:0007690!5.20e-09!11;UBERON:0002106!1.51e-08!3;UBERON:0004854!1.51e-08!3;UBERON:0009034!1.51e-08!3;UBERON:0002095!1.51e-08!3;UBERON:0004782!1.51e-08!3;UBERON:0003281!1.51e-08!3;UBERON:0009664!1.51e-08!3;UBERON:0002296!1.51e-08!3;UBERON:0005602!1.51e-08!3;UBERON:0001179!1.51e-08!3;UBERON:0006293!1.51e-08!3;UBERON:0005057!2.93e-08!26;UBERON:0008814!7.63e-07!15 | |ontology_enrichment_uberon=UBERON:0004177!9.08e-29!7;UBERON:0001764!5.13e-23!1;UBERON:0001825!5.13e-23!1;UBERON:0002370!5.14e-23!4;UBERON:0005058!5.14e-23!4;UBERON:0009113!5.14e-23!4;UBERON:0003295!5.14e-23!4;UBERON:0005562!5.14e-23!4;UBERON:0000974!1.91e-20!10;UBERON:0003351!1.05e-15!6;UBERON:0000341!2.90e-12!2;UBERON:0003408!8.09e-10!10;UBERON:0001042!8.09e-10!10;UBERON:0009145!8.09e-10!10;UBERON:0006562!5.20e-09!11;UBERON:0009722!5.20e-09!11;UBERON:0007690!5.20e-09!11;UBERON:0002106!1.51e-08!3;UBERON:0004854!1.51e-08!3;UBERON:0009034!1.51e-08!3;UBERON:0002095!1.51e-08!3;UBERON:0004782!1.51e-08!3;UBERON:0003281!1.51e-08!3;UBERON:0009664!1.51e-08!3;UBERON:0002296!1.51e-08!3;UBERON:0005602!1.51e-08!3;UBERON:0001179!1.51e-08!3;UBERON:0006293!1.51e-08!3;UBERON:0005057!2.93e-08!26;UBERON:0008814!7.63e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.53e-66;2!UBERON:0005058;5.53e-66;2!UBERON:0009113;5.53e-66;2!UBERON:0004177;3.55e-27;5!UBERON:0005057;3.55e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.17e-33,4;UBERON:0005058,1.17e-33,4;UBERON:0009113,1.17e-33,4;UBERON:0003295,1.17e-33,4;UBERON:0005562,1.17e-33,4;UBERON:0003351,7.58e-23,6;UBERON:0004177,9.49e-20,7;UBERON:0005057,9.49e-20,7;UBERON:0000974,3.71e-14,10;UBERON:0003408,3.71e-14,10;UBERON:0001042,3.71e-14,10;UBERON:0009145,3.71e-14,10;UBERON:0006562,5.76e-13,11;UBERON:0009722,5.76e-13,11;UBERON:0007690,5.76e-13,11;UBERON:0008814,2.61e-08,18;UBERON:0001557,6.36e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2804704678058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2444254421716,4.14508309094938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3509277113178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,5.16711278688049,5.21427600085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2804704678058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2444254421716,4.14508309094938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3509277113178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,5.16711278688049,5.21427600085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000441348 | |short_description=p1@ENST00000441348 | ||
}} | }} |
Latest revision as of 15:21, 23 July 2015
Short description: | p1@ENST00000441348 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000441348_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | -260bp_to_ENST00000441348_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.23e-12 | 25 |
pro-T cell | 1.23e-12 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.17e-33 | 4 |
hemolymphoid system gland | 1.17e-33 | 4 |
thymic region | 1.17e-33 | 4 |
pharyngeal gland | 1.17e-33 | 4 |
thymus primordium | 1.17e-33 | 4 |
pharyngeal epithelium | 7.58e-23 | 6 |
hemopoietic organ | 9.49e-20 | 7 |
immune organ | 9.49e-20 | 7 |
neck | 3.71e-14 | 10 |
gland of gut | 3.71e-14 | 10 |
chordate pharynx | 3.71e-14 | 10 |
pharyngeal region of foregut | 3.71e-14 | 10 |
pharynx | 5.76e-13 | 11 |
entire pharyngeal arch endoderm | 5.76e-13 | 11 |
early pharyngeal endoderm | 5.76e-13 | 11 |
pharyngeal arch system | 2.61e-08 | 18 |
upper respiratory tract | 6.36e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.89e-11 | 51 |
immune system cancer | 5.89e-11 | 51 |
leukemia | 2.30e-08 | 39 |