FFCP PHASE1:Hg19::chr16:84651154..84651183,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:84651154..84651183,-
|short_description=p5@COTL1
|description=CAGE_peak_5_at_COTL1_5end
|association_with_transcript=0bp_to_AK026033_5end
|EntrezGene=234...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23406 | |EntrezGene=23406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18304 | |HGNC=18304 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK026033_5end | |||
|cluster_id=chr16:84651154..84651183,- | |||
|description=CAGE_peak_5_at_COTL1_5end | |||
|id=chr16:84651154..84651183,- | |||
|ontology_enrichment_celltype=CL:0000766!4.94e-23!76;CL:0002057!1.83e-22!42;CL:0002194!3.43e-22!63;CL:0000576!3.43e-22!63;CL:0000040!3.43e-22!63;CL:0000559!3.43e-22!63;CL:0002009!5.88e-21!65;CL:0000860!6.49e-21!45;CL:0000839!1.01e-20!70;CL:0000557!1.95e-20!71;CL:0000144!3.69e-15!625;CL:0000548!1.68e-14!679;CL:0000004!1.68e-14!679;CL:0000255!1.68e-14!679;CL:0000012!1.05e-13!682;CL:0002371!1.49e-13!591;CL:0000763!1.64e-13!112;CL:0000049!1.64e-13!112;CL:0000222!2.81e-13!119;CL:0000003!1.47e-11!722;CL:0000213!2.42e-09!57;CL:0000215!2.42e-09!57;CL:0000738!5.88e-09!140;CL:0000048!1.08e-08!430;CL:0000063!1.53e-08!578;CL:0000723!1.91e-08!436;CL:0002087!4.17e-08!119;CL:0000034!1.45e-07!444;CL:0002031!2.07e-07!124;CL:0000220!8.58e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.59e-27;33!CL:0002057;2.59e-27;33!CL:0000576;4.64e-27;48!CL:0000473;2.66e-24;39!CL:0000234;2.66e-24;39!CL:0000766;3.72e-20;69!CL:0000763;2.52e-08;100!CL:0002393;4.29e-08;6!CL:0002397;4.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.42e-42,48;CL:0000234,1.42e-42,48;CL:0000860,2.81e-41,42;CL:0002057,2.81e-41,42;CL:0002194,7.29e-39,59;CL:0000576,7.29e-39,59;CL:0000040,7.29e-39,59;CL:0000559,7.29e-39,59;CL:0000766,1.24e-37,72;CL:0002009,4.30e-37,61;CL:0000839,1.09e-34,66;CL:0000557,6.10e-34,67;CL:0000763,2.04e-24,108;CL:0000049,2.04e-24,108;CL:0000738,5.12e-16,136;CL:0002087,1.01e-14,115;CL:0002031,2.35e-13,120;CL:0002393,1.86e-12,9;CL:0002397,1.86e-12,9;CL:0000048,2.09e-12,427;CL:0000723,2.64e-12,433;CL:0002032,9.77e-12,161;CL:0000837,9.77e-12,161;CL:0000034,1.46e-11,441;CL:0000037,2.44e-11,168;CL:0000988,1.18e-10,177;CL:0000134,1.12e-09,354;CL:0002320,1.62e-09,361;CL:0000222,1.01e-08,121;CL:0000219,2.69e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.92e-29;42!CL:0000049;2.56e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.87e-16!80;UBERON:0001474!2.35e-14!86;UBERON:0003081!9.54e-14!216;UBERON:0002204!1.12e-13!167;UBERON:0002193!2.92e-13!112;UBERON:0002390!1.37e-12!102;UBERON:0003061!1.37e-12!102;UBERON:0002405!1.64e-12!115;UBERON:0004765!2.82e-12!101;UBERON:0001434!2.82e-12!101;UBERON:0000926!8.17e-10!448;UBERON:0004120!8.17e-10!448;UBERON:0006603!8.17e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-30,76;UBERON:0001474,2.62e-27,82;UBERON:0002405,6.56e-25,93;UBERON:0004765,8.83e-25,90;UBERON:0001434,4.75e-24,100;UBERON:0002204,9.44e-22,167;UBERON:0002390,1.25e-21,98;UBERON:0003061,1.25e-21,98;UBERON:0003081,1.46e-20,203;UBERON:0002193,1.86e-20,108;UBERON:0000926,9.64e-17,315;UBERON:0004120,9.64e-17,315;UBERON:0006603,9.64e-17,315;UBERON:0002384,1.17e-08,371 | |||
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| ||
|short_description=p5@COTL1 | |||
}} | }} |
Latest revision as of 04:03, 18 September 2015
Short description: | p5@COTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_COTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK026033_5end |
EntrezGene: | COTL1 |
HGNC: | 18304 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-30 | 76 |
bone element | 2.62e-27 | 82 |
immune system | 6.56e-25 | 93 |
skeletal element | 8.83e-25 | 90 |
skeletal system | 4.75e-24 | 100 |
musculoskeletal system | 9.44e-22 | 167 |
hematopoietic system | 1.25e-21 | 98 |
blood island | 1.25e-21 | 98 |
lateral plate mesoderm | 1.46e-20 | 203 |
hemolymphoid system | 1.86e-20 | 108 |
mesoderm | 9.64e-17 | 315 |
mesoderm-derived structure | 9.64e-17 | 315 |
presumptive mesoderm | 9.64e-17 | 315 |
connective tissue | 1.17e-08 | 371 |