FFCP PHASE1:Hg19::chr16:86600426..86600441,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:86600426..86600441,+
|short_description=p1@FOXC2
|description=CAGE_peak_1_at_FOXC2_5end
|association_with_transcript=-415bp_to_ENST00000320354,NM_005251,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2303 | |EntrezGene=2303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3801 | |HGNC=3801 | ||
|TSSclassifier=strong | |||
|UniProt=Q99958 | |UniProt=Q99958 | ||
|association_with_transcript=-415bp_to_ENST00000320354,NM_005251,uc002fjq.2_5end | |||
|cluster_id=chr16:86600426..86600441,+ | |||
|description=CAGE_peak_1_at_FOXC2_5end | |||
|id=chr16:86600426..86600441,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-28!180;CL:0000222!1.84e-20!119;CL:0000183!1.83e-15!59;CL:0000680!2.17e-14!57;CL:0000056!2.17e-14!57;CL:0000355!2.17e-14!57;CL:0000057!1.32e-13!75;CL:0000187!4.26e-13!54;CL:0000359!1.75e-11!32;CL:0000192!1.89e-11!42;CL:0000514!1.89e-11!42;CL:0000393!1.99e-11!60;CL:0000211!1.99e-11!60;CL:0002139!3.44e-10!24;CL:0000115!1.94e-09!35;CL:0002078!1.43e-08!44;CL:0000071!1.80e-08!18;CL:0002546!1.80e-08!18;CL:0000220!3.48e-08!246;CL:0002321!5.42e-08!248;CL:0000213!4.38e-07!57;CL:0000215!4.38e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.13e-11;32!CL:0002139;1.35e-10;24!CL:0000115;6.98e-09;36!CL:0000071;9.24e-09;18!CL:0000192;1.44e-08;43!CL:0000187;1.22e-07;55!CL:1000449;6.65e-07;15!CL:0000057;7.19e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.15e-20,121;CL:0000680,1.40e-14,58;CL:0000056,1.40e-14,58;CL:0000355,1.40e-14,58;CL:0000057,2.35e-14,76;CL:0000187,3.16e-13,55;CL:0000359,4.32e-12,32;CL:0000192,1.92e-11,43;CL:0000514,1.92e-11,43;CL:0000393,6.11e-11,61;CL:0000211,6.11e-11,61;CL:0002139,1.02e-10,24;CL:0000115,2.65e-10,36;CL:0000071,6.77e-09,18;CL:0002546,6.77e-09,18;CL:0002078,1.11e-08,45;CL:1000449,7.01e-07,15;CL:0000213,8.29e-07,58;CL:0000215,8.29e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.24e-09;18!CL:0000514;1.44e-08;43!CL:0000355;3.37e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.16e-27!79;UBERON:0007798!1.16e-27!79;UBERON:0004872!1.45e-21!84;UBERON:0000055!2.37e-21!69;UBERON:0000477!1.45e-20!286;UBERON:0001981!1.89e-20!60;UBERON:0007500!1.89e-20!60;UBERON:0004537!1.89e-20!60;UBERON:0006965!1.89e-20!60;UBERON:0000914!3.69e-20!83;UBERON:0002329!3.69e-20!83;UBERON:0003077!3.69e-20!83;UBERON:0003059!3.69e-20!83;UBERON:0007282!3.69e-20!83;UBERON:0009618!3.69e-20!83;UBERON:0007285!3.69e-20!83;UBERON:0001009!9.63e-20!113;UBERON:0004535!1.63e-19!110;UBERON:0000119!1.18e-18!312;UBERON:0000475!2.97e-18!365;UBERON:0003914!7.12e-18!118;UBERON:0000481!1.10e-17!347;UBERON:0000483!1.20e-17!309;UBERON:0000468!1.31e-16!659;UBERON:0004290!3.19e-16!70;UBERON:0001637!1.37e-15!42;UBERON:0003509!1.37e-15!42;UBERON:0004572!1.37e-15!42;UBERON:0004111!2.50e-15!241;UBERON:0005256!4.66e-15!143;UBERON:0001134!1.92e-14!61;UBERON:0002036!1.92e-14!61;UBERON:0003082!1.92e-14!61;UBERON:0002385!3.50e-14!63;UBERON:0001015!3.50e-14!63;UBERON:0000383!3.50e-14!63;UBERON:0000486!5.44e-14!82;UBERON:0000025!1.58e-13!194;UBERON:0000467!2.60e-13!625;UBERON:0000480!4.51e-13!626;UBERON:0004573!2.60e-11!33;UBERON:0004571!2.60e-11!33;UBERON:0000922!6.41e-11!612;UBERON:0002100!8.08e-11!216;UBERON:0002050!9.45e-11!605;UBERON:0005423!9.45e-11!605;UBERON:0000923!1.08e-10!604;UBERON:0005291!1.08e-10!604;UBERON:0006598!1.08e-10!604;UBERON:0002532!1.08e-10!604;UBERON:0003104!9.80e-10!238;UBERON:0009142!9.80e-10!238;UBERON:0003103!2.18e-09!69;UBERON:0000490!4.67e-09!138;UBERON:0001986!1.80e-08!18;UBERON:0004638!1.80e-08!18;UBERON:0004852!1.80e-08!18;UBERON:0000033!7.07e-08!123;UBERON:0000153!2.75e-07!129;UBERON:0007811!2.75e-07!129;UBERON:0001444!3.09e-07!48;UBERON:0006914!5.14e-07!25;UBERON:0000947!5.63e-07!21;UBERON:0010191!5.63e-07!21;UBERON:0000487!7.48e-07!22;UBERON:0002200!9.59e-07!11;UBERON:0006876!9.59e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.57e-12;42!UBERON:0003509;2.57e-12;42!UBERON:0004572;2.57e-12;42!UBERON:0002049;1.05e-11;75!UBERON:0007798;1.05e-11;75!UBERON:0007500;3.68e-11;56!UBERON:0001981;3.68e-11;56!UBERON:0004537;3.68e-11;56!UBERON:0003914;8.26e-11;74!UBERON:0004573;1.07e-10;33!UBERON:0004571;1.07e-10;33!UBERON:0000055;1.32e-10;65!UBERON:0004638;9.24e-09;18!UBERON:0001986;9.24e-09;18!UBERON:0004852;9.24e-09;18!UBERON:0000947;3.25e-07;21!UBERON:0010191;3.25e-07;21!UBERON:0006876;4.68e-07;11!UBERON:0006555;6.65e-07;15!UBERON:0004819;6.65e-07;15!UBERON:0001285;6.65e-07;15!UBERON:0007684;6.65e-07;15!UBERON:0001009;7.33e-07;112!UBERON:0000487;9.73e-07;22!UBERON:0004535;9.79e-07;109 | |||
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| ||
|short_description=p1@FOXC2 | |||
}} | }} |
Latest revision as of 06:50, 18 September 2015
Short description: | p1@FOXC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -415bp_to_ENST00000320354, NM_005251, uc002fjq.2_5end |
EntrezGene: | FOXC2 |
HGNC: | 3801 |
UniProt: | Q99958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.15e-20 | 121 |
muscle precursor cell | 1.40e-14 | 58 |
myoblast | 1.40e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-14 | 58 |
fibroblast | 2.35e-14 | 76 |
muscle cell | 3.16e-13 | 55 |
vascular associated smooth muscle cell | 4.32e-12 | 32 |
smooth muscle cell | 1.92e-11 | 43 |
smooth muscle myoblast | 1.92e-11 | 43 |
electrically responsive cell | 6.11e-11 | 61 |
electrically active cell | 6.11e-11 | 61 |
endothelial cell of vascular tree | 1.02e-10 | 24 |
endothelial cell | 2.65e-10 | 36 |
blood vessel endothelial cell | 6.77e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.77e-09 | 18 |
meso-epithelial cell | 1.11e-08 | 45 |
epithelial cell of nephron | 7.01e-07 | 15 |
lining cell | 8.29e-07 | 58 |
barrier cell | 8.29e-07 | 58 |