FFCP PHASE1:Hg19::chr9:103235423..103235444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8577 | |EntrezGene=8577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11866 | |HGNC=11866 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYR6 | |UniProt=Q8IYR6 | ||
|association_with_transcript=28bp_to_ENST00000374879_5end | |association_with_transcript=28bp_to_ENST00000374879_5end | ||
|cluster_id=chr9:103235423..103235444,+ | |||
|coexpression_cluster_id=C4786 | |||
|description=CAGE_peak_4_at_TMEFF1_5end | |description=CAGE_peak_4_at_TMEFF1_5end | ||
|id=chr9:103235423..103235444,+ | |id=chr9:103235423..103235444,+ | ||
|ontology_enrichment_celltype=CL:0002319!4.78e-11!25;CL:0000133!4.14e-10!59;CL:0002139!2.89e-09!24;CL:0000333!1.23e-07!41;CL:0000047!1.76e-07!8 | |ontology_enrichment_celltype=CL:0002319!4.78e-11!25;CL:0000133!4.14e-10!59;CL:0002139!2.89e-09!24;CL:0000333!1.23e-07!41;CL:0000047!1.76e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.15e-11;25!CL:0002321;1.22e-10;15!CL:0000540;5.87e-10;6!CL:0000404;5.87e-10;6!CL:0000039;3.59e-09;7!CL:0000586;3.59e-09;7!CL:0002322;9.01e-09;5!CL:0000333;6.01e-08;5!CL:0002138;1.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.87e-12,8;CL:0000133,2.67e-11,59;CL:0002319,3.39e-11,25;CL:0000540,5.88e-10,6;CL:0000031,5.88e-10,6;CL:0000404,5.88e-10,6;CL:0000039,4.35e-09,7;CL:0000586,4.35e-09,7;CL:0002322,9.27e-09,5;CL:0000221,6.92e-08,72;CL:0005020,1.86e-07,6;CL:0002138,1.86e-07,6;CL:0005022,1.86e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.08e-10;82!CL:0000031;5.87e-10;6!CL:0005022;1.43e-07;6!CL:0000133;9.46e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!1.04e-13!22;DOID:2994!1.04e-13!22;DOID:171!5.48e-07!10 | |ontology_enrichment_disease=DOID:3095!1.04e-13!22;DOID:2994!1.04e-13!22;DOID:171!5.48e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.60e-18;22!DOID:2994;1.60e-18;22!DOID:171;3.98e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.23e-19,22;DOID:2994,9.23e-19,22;DOID:171,2.66e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.47e-36!94;UBERON:0001016!8.47e-36!94;UBERON:0005743!1.34e-32!86;UBERON:0001017!2.94e-31!82;UBERON:0002346!1.42e-23!90;UBERON:0000955!1.97e-23!69;UBERON:0006238!1.97e-23!69;UBERON:0001049!1.59e-22!57;UBERON:0005068!1.59e-22!57;UBERON:0006241!1.59e-22!57;UBERON:0007135!1.59e-22!57;UBERON:0000924!1.81e-22!173;UBERON:0006601!1.81e-22!173;UBERON:0003075!9.19e-22!86;UBERON:0007284!9.19e-22!86;UBERON:0002020!6.33e-21!34;UBERON:0003528!6.33e-21!34;UBERON:0004121!7.29e-21!169;UBERON:0001893!7.37e-21!34;UBERON:0002791!2.57e-20!33;UBERON:0001869!2.02e-19!32;UBERON:0002616!3.28e-19!59;UBERON:0003056!5.88e-19!61;UBERON:0002780!7.97e-19!41;UBERON:0001890!7.97e-19!41;UBERON:0006240!7.97e-19!41;UBERON:0003080!6.12e-18!42;UBERON:0000033!1.24e-15!123;UBERON:0000956!2.00e-15!25;UBERON:0000203!2.00e-15!25;UBERON:0000153!7.90e-15!129;UBERON:0007811!7.90e-15!129;UBERON:0002619!6.11e-14!22;UBERON:0001950!7.88e-13!20;UBERON:0000119!1.14e-11!312;UBERON:0000483!2.32e-11!309;UBERON:0000025!3.02e-10!194;UBERON:0004111!2.78e-09!241;UBERON:0000475!8.94e-08!365;UBERON:0000477!9.91e-08!286;UBERON:0000468!1.10e-07!659;UBERON:0002308!5.68e-07!9;UBERON:0000125!5.68e-07!9;UBERON:0000922!7.35e-07!612 | |ontology_enrichment_uberon=UBERON:0000073!8.47e-36!94;UBERON:0001016!8.47e-36!94;UBERON:0005743!1.34e-32!86;UBERON:0001017!2.94e-31!82;UBERON:0002346!1.42e-23!90;UBERON:0000955!1.97e-23!69;UBERON:0006238!1.97e-23!69;UBERON:0001049!1.59e-22!57;UBERON:0005068!1.59e-22!57;UBERON:0006241!1.59e-22!57;UBERON:0007135!1.59e-22!57;UBERON:0000924!1.81e-22!173;UBERON:0006601!1.81e-22!173;UBERON:0003075!9.19e-22!86;UBERON:0007284!9.19e-22!86;UBERON:0002020!6.33e-21!34;UBERON:0003528!6.33e-21!34;UBERON:0004121!7.29e-21!169;UBERON:0001893!7.37e-21!34;UBERON:0002791!2.57e-20!33;UBERON:0001869!2.02e-19!32;UBERON:0002616!3.28e-19!59;UBERON:0003056!5.88e-19!61;UBERON:0002780!7.97e-19!41;UBERON:0001890!7.97e-19!41;UBERON:0006240!7.97e-19!41;UBERON:0003080!6.12e-18!42;UBERON:0000033!1.24e-15!123;UBERON:0000956!2.00e-15!25;UBERON:0000203!2.00e-15!25;UBERON:0000153!7.90e-15!129;UBERON:0007811!7.90e-15!129;UBERON:0002619!6.11e-14!22;UBERON:0001950!7.88e-13!20;UBERON:0000119!1.14e-11!312;UBERON:0000483!2.32e-11!309;UBERON:0000025!3.02e-10!194;UBERON:0004111!2.78e-09!241;UBERON:0000475!8.94e-08!365;UBERON:0000477!9.91e-08!286;UBERON:0000468!1.10e-07!659;UBERON:0002308!5.68e-07!9;UBERON:0000125!5.68e-07!9;UBERON:0000922!7.35e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.08e-29;32!UBERON:0001893;1.12e-29;34!UBERON:0003528;1.14e-29;34!UBERON:0002020;1.14e-29;34!UBERON:0001869;2.24e-29;32!UBERON:0002780;4.66e-25;41!UBERON:0001890;4.66e-25;41!UBERON:0000956;8.32e-25;25!UBERON:0000203;8.32e-25;25!UBERON:0002619;5.14e-22;22!UBERON:0001950;5.29e-20;20!UBERON:0000073;5.98e-20;53!UBERON:0002616;5.98e-20;53!UBERON:0001016;3.99e-16;83!UBERON:0001017;2.25e-15;75!UBERON:0000955;2.71e-15;68!UBERON:0000125;1.57e-11;9!UBERON:0002308;1.57e-11;9!UBERON:0009663;3.22e-09;7!UBERON:0002298;1.13e-08;6!UBERON:0002420;1.21e-08;9!UBERON:0007245;1.21e-08;9!UBERON:0010009;1.21e-08;9!UBERON:0010011;1.21e-08;9!UBERON:0000454;1.21e-08;9!UBERON:0000013;6.01e-08;5!UBERON:0002410;6.01e-08;5!UBERON:0000200;4.24e-07;6!UBERON:0001872;7.53e-07;5 | |||
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| ||
|short_description=p4@TMEFF1 | |short_description=p4@TMEFF1 | ||
}} | }} |
Latest revision as of 21:05, 19 September 2015
Short description: | p4@TMEFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEFF1_5end |
Coexpression cluster: | C4786_occipital_H9_parietal_Neural_duodenum_Neurons_temporal |
Association with transcript: | 28bp_to_ENST00000374879_5end |
EntrezGene: | TMEFF1 |
HGNC: | 11866 |
UniProt: | Q8IYR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.87e-12 | 8 |
neurectodermal cell | 2.67e-11 | 59 |
neural cell | 3.39e-11 | 25 |
neuron | 5.88e-10 | 6 |
neuroblast | 5.88e-10 | 6 |
electrically signaling cell | 5.88e-10 | 6 |
germ line cell | 4.35e-09 | 7 |
germ cell | 4.35e-09 | 7 |
embryonic stem cell | 9.27e-09 | 5 |
ectodermal cell | 6.92e-08 | 72 |
lymphangioblast | 1.86e-07 | 6 |
endothelial cell of lymphatic vessel | 1.86e-07 | 6 |
vascular lymphangioblast | 1.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.23e-19 | 22 |
germ cell cancer | 9.23e-19 | 22 |
neuroectodermal tumor | 2.66e-08 | 10 |