FFCP PHASE1:Hg19::chr14:54317532..54317552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000418927_5end | |association_with_transcript=47bp_to_ENST00000418927_5end | ||
|cluster_id=chr14:54317532..54317552,- | |||
|coexpression_cluster_id=C3432 | |||
|description=CAGE_peak_1_at_ENST00000418927_5end | |description=CAGE_peak_1_at_ENST00000418927_5end | ||
|id=chr14:54317532..54317552,- | |id=chr14:54317532..54317552,- | ||
|ontology_enrichment_celltype=CL:0000077!7.94e-23!19;CL:0000066!6.30e-22!254;CL:0000213!1.13e-12!57;CL:0000215!1.13e-12!57;CL:0000076!4.02e-11!62;CL:0000223!1.14e-07!59 | |ontology_enrichment_celltype=CL:0000077!7.94e-23!19;CL:0000066!6.30e-22!254;CL:0000213!1.13e-12!57;CL:0000215!1.13e-12!57;CL:0000076!4.02e-11!62;CL:0000223!1.14e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.30e-26;19!CL:0002097;9.41e-15;2!CL:0000174;3.91e-10;3!CL:0002563;1.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.45e-26,19;CL:0002097,9.74e-15,2;CL:0000066,1.47e-14,253;CL:0000174,4.00e-10,3;CL:0000213,1.32e-09,58;CL:0000215,1.32e-09,58;CL:0002563,1.10e-07,4;CL:0000076,4.75e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.06e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.27e-19!106;DOID:0050687!6.11e-18!143;DOID:162!1.85e-15!235;DOID:14566!8.76e-15!239 | |ontology_enrichment_disease=DOID:305!1.27e-19!106;DOID:0050687!6.11e-18!143;DOID:162!1.85e-15!235;DOID:14566!8.76e-15!239 | ||
|ontology_enrichment_disease_v019=DOID:299;1.37e-12;25!DOID:170;9.33e-11;6!DOID:3111;2.52e-08;1!DOID:3603;2.52e-08;1!DOID:3112;1.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.62e-15,106;DOID:299,1.31e-12,25;DOID:0050687,8.99e-12,143;DOID:170,9.33e-11,6;DOID:162,9.71e-11,235;DOID:14566,2.01e-10,239;DOID:3111,2.52e-08,1;DOID:3603,2.52e-08,1;DOID:3112,9.29e-08,1;DOID:7,1.20e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005911!4.88e-16!82;UBERON:0003929!3.03e-14!54;UBERON:0002294!5.11e-13!7;UBERON:0001173!5.11e-13!7;UBERON:0004912!5.11e-13!7;UBERON:0004119!9.61e-13!169;UBERON:0000925!9.61e-13!169;UBERON:0006595!9.61e-13!169;UBERON:0000077!5.44e-12!130;UBERON:0001007!2.58e-11!155;UBERON:0001555!2.58e-11!155;UBERON:0007026!2.58e-11!155;UBERON:0009497!2.73e-11!25;UBERON:0000015!2.73e-11!25;UBERON:0002423!2.73e-11!25;UBERON:0006235!2.73e-11!25;UBERON:0004161!2.73e-11!25;UBERON:0004921!1.46e-10!129;UBERON:0004185!1.46e-10!129;UBERON:0007499!1.58e-09!25;UBERON:0009856!4.88e-09!26;UBERON:0002394!3.39e-08!4;UBERON:0003928!3.39e-08!4;UBERON:0000466!5.18e-08!126;UBERON:0008835!7.68e-08!22;UBERON:0003894!7.68e-08!22;UBERON:0009854!2.16e-07!23;UBERON:0005177!3.03e-07!107;UBERON:0005172!3.58e-07!55;UBERON:0005173!3.58e-07!55;UBERON:0001041!4.45e-07!98;UBERON:0002530!5.84e-07!59;UBERON:0001048!5.94e-07!168;UBERON:0000060!8.08e-07!12 | |ontology_enrichment_uberon=UBERON:0005911!4.88e-16!82;UBERON:0003929!3.03e-14!54;UBERON:0002294!5.11e-13!7;UBERON:0001173!5.11e-13!7;UBERON:0004912!5.11e-13!7;UBERON:0004119!9.61e-13!169;UBERON:0000925!9.61e-13!169;UBERON:0006595!9.61e-13!169;UBERON:0000077!5.44e-12!130;UBERON:0001007!2.58e-11!155;UBERON:0001555!2.58e-11!155;UBERON:0007026!2.58e-11!155;UBERON:0009497!2.73e-11!25;UBERON:0000015!2.73e-11!25;UBERON:0002423!2.73e-11!25;UBERON:0006235!2.73e-11!25;UBERON:0004161!2.73e-11!25;UBERON:0004921!1.46e-10!129;UBERON:0004185!1.46e-10!129;UBERON:0007499!1.58e-09!25;UBERON:0009856!4.88e-09!26;UBERON:0002394!3.39e-08!4;UBERON:0003928!3.39e-08!4;UBERON:0000466!5.18e-08!126;UBERON:0008835!7.68e-08!22;UBERON:0003894!7.68e-08!22;UBERON:0009854!2.16e-07!23;UBERON:0005177!3.03e-07!107;UBERON:0005172!3.58e-07!55;UBERON:0005173!3.58e-07!55;UBERON:0001041!4.45e-07!98;UBERON:0002530!5.84e-07!59;UBERON:0001048!5.94e-07!168;UBERON:0000060!8.08e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;3.91e-10;3!UBERON:0001235;3.91e-10;3!UBERON:0006858;3.91e-10;3!UBERON:0002294;1.84e-09;7!UBERON:0001173;1.84e-09;7!UBERON:0002394;6.64e-08;4!UBERON:0003928;6.64e-08;4!UBERON:0001052;7.74e-08;4!UBERON:0001831;1.06e-07;1!UBERON:0001567;1.06e-07;1!UBERON:0001242;1.10e-07;4!UBERON:0001262;1.10e-07;4!UBERON:0004786;1.10e-07;4!UBERON:0004808;1.10e-07;4!UBERON:0001277;1.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.00e-10,3;UBERON:0001235,4.00e-10,3;UBERON:0006858,4.00e-10,3;UBERON:0001052,7.87e-08,4;UBERON:0001242,1.10e-07,4;UBERON:0001262,1.10e-07,4;UBERON:0004786,1.10e-07,4;UBERON:0004808,1.10e-07,4;UBERON:0001277,1.10e-07,4;UBERON:0001831,1.21e-07,1;UBERON:0001567,1.21e-07,1;UBERON:0008801,1.21e-07,1;UBERON:0002294,1.91e-07,9;UBERON:0001173,1.91e-07,9;UBERON:0004912,1.91e-07,9;UBERON:0003929,7.49e-07,54 | |||
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|short_description=p1@ENST00000418927 | |short_description=p1@ENST00000418927 | ||
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Latest revision as of 21:10, 24 July 2015
Short description: | p1@ENST00000418927 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418927_5end |
Coexpression cluster: | C3432_pharyngeal_signet_serous_bile_rectal_clear_mucinous |
Association with transcript: | 47bp_to_ENST00000418927_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.45e-26 | 19 |
cortical cell of adrenal gland | 9.74e-15 | 2 |
epithelial cell | 1.47e-14 | 253 |
steroid hormone secreting cell | 4.00e-10 | 3 |
lining cell | 1.32e-09 | 58 |
barrier cell | 1.32e-09 | 58 |
intestinal epithelial cell | 1.10e-07 | 4 |
squamous epithelial cell | 4.75e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 4.00e-10 | 3 |
adrenal cortex | 4.00e-10 | 3 |
adrenal/interrenal gland | 4.00e-10 | 3 |
rectum | 7.87e-08 | 4 |
intestinal mucosa | 1.10e-07 | 4 |
wall of intestine | 1.10e-07 | 4 |
gastrointestinal system mucosa | 1.10e-07 | 4 |
gastrointestinal system epithelium | 1.10e-07 | 4 |
intestinal epithelium | 1.10e-07 | 4 |
parotid gland | 1.21e-07 | 1 |
cheek | 1.21e-07 | 1 |
parotid gland primordium | 1.21e-07 | 1 |
biliary system | 1.91e-07 | 9 |
biliary tree | 1.91e-07 | 9 |
biliary bud | 1.91e-07 | 9 |
gut epithelium | 7.49e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.62e-15 | 106 |
adenocarcinoma | 1.31e-12 | 25 |
cell type cancer | 8.99e-12 | 143 |
endocrine gland cancer | 9.33e-11 | 6 |
cancer | 9.71e-11 | 235 |
disease of cellular proliferation | 2.01e-10 | 239 |
cystadenocarcinoma | 2.52e-08 | 1 |
mucinous cystadenocarcinoma | 2.52e-08 | 1 |
papillary adenocarcinoma | 9.29e-08 | 1 |
disease of anatomical entity | 1.20e-07 | 39 |