FFCP PHASE1:Hg19::chr9:15980752..15980757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:15980752..15980757,+ | |||
|coexpression_cluster_id=C790 | |||
|description=CAGE_peak_at_chr9:15980752..15980757,+ | |description=CAGE_peak_at_chr9:15980752..15980757,+ | ||
|id=chr9:15980752..15980757,+ | |id=chr9:15980752..15980757,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.06e-12;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.59e-23;1!UBERON:0003056;1.35e-08;3 | |||
|ontology_enrichment_disease=DOID:171!5.63e-14!10;DOID:3095!9.43e-07!22;DOID:2994!9.43e-07!22 | |ontology_enrichment_disease=DOID:171!5.63e-14!10;DOID:3095!9.43e-07!22;DOID:2994!9.43e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:171;5.69e-55;10!DOID:3095;3.21e-25;22!DOID:2994;3.21e-25;22!DOID:3193;3.06e-12;2!DOID:962;3.06e-12;2!DOID:1192;1.35e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.95e-55,10;DOID:3095,3.74e-25,22;DOID:2994,3.74e-25,22;DOID:3193,3.62e-12,2;DOID:962,3.62e-12,2;DOID:1192,1.51e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.42e-11!94;UBERON:0001016!9.42e-11!94;UBERON:0000924!3.00e-10!173;UBERON:0006601!3.00e-10!173;UBERON:0002346!4.02e-10!90;UBERON:0000010!3.06e-08!8;UBERON:0002020!9.76e-08!34;UBERON:0003528!9.76e-08!34;UBERON:0004121!1.16e-07!169;UBERON:0000013!3.49e-07!5;UBERON:0002410!3.49e-07!5;UBERON:0001950!4.08e-07!20;UBERON:0002780!5.95e-07!41;UBERON:0001890!5.95e-07!41;UBERON:0006240!5.95e-07!41;UBERON:0003075!6.43e-07!86;UBERON:0007284!6.43e-07!86;UBERON:0005743!6.66e-07!86;UBERON:0007023!6.77e-07!115;UBERON:0001017!9.22e-07!82;UBERON:0002791!9.59e-07!33;UBERON:0000956!9.75e-07!25;UBERON:0000203!9.75e-07!25 | |ontology_enrichment_uberon=UBERON:0000073!9.42e-11!94;UBERON:0001016!9.42e-11!94;UBERON:0000924!3.00e-10!173;UBERON:0006601!3.00e-10!173;UBERON:0002346!4.02e-10!90;UBERON:0000010!3.06e-08!8;UBERON:0002020!9.76e-08!34;UBERON:0003528!9.76e-08!34;UBERON:0004121!1.16e-07!169;UBERON:0000013!3.49e-07!5;UBERON:0002410!3.49e-07!5;UBERON:0001950!4.08e-07!20;UBERON:0002780!5.95e-07!41;UBERON:0001890!5.95e-07!41;UBERON:0006240!5.95e-07!41;UBERON:0003075!6.43e-07!86;UBERON:0007284!6.43e-07!86;UBERON:0005743!6.66e-07!86;UBERON:0007023!6.77e-07!115;UBERON:0001017!9.22e-07!82;UBERON:0002791!9.59e-07!33;UBERON:0000956!9.75e-07!25;UBERON:0000203!9.75e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.01e-88;4!UBERON:0000923;4.01e-88;4!UBERON:0010316;4.01e-88;4!UBERON:0005291;4.01e-88;4!UBERON:0002050;1.16e-70;5!UBERON:0005423;1.16e-70;5!UBERON:0003714;2.98e-44;2!UBERON:0000941;4.59e-23;1!UBERON:0001785;4.59e-23;1!UBERON:0002464;4.59e-23;1!UBERON:0004904;4.59e-23;1!UBERON:0001021;4.59e-23;1!UBERON:0005162;3.06e-12;2!UBERON:0000122;3.06e-12;2!UBERON:0000010;1.12e-10;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.98e-44,2;UBERON:0000941,3.28e-23,1;UBERON:0001785,3.28e-23,1;UBERON:0002464,3.28e-23,1;UBERON:0004904,3.28e-23,1;UBERON:0001021,3.28e-23,1;UBERON:0003902,3.28e-23,1;UBERON:0005425,3.28e-23,1;UBERON:0005162,2.59e-12,2;UBERON:0000122,2.59e-12,2;UBERON:0000010,1.12e-10,8;UBERON:0001781,8.61e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0.284567373393656,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0.994147647766298,0,0,0,3.3780065300479,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,6.9985107211981,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0.789168805698781,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0.586654148204409,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.314531883711793,0.109209638192014,6.61956866820698,6.37724760305049,7.43614585554013,1.11728983594649,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0.781078098613847,0,0,0.546974809018219,0,0,1.23109871051734,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0.435433495793923,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p@chr9:15980752..15980757,+ | |short_description=p@chr9:15980752..15980757,+ | ||
}} | }} |
Latest revision as of 00:54, 1 August 2015
Short description: | p@chr9:15980752..15980757, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:15980752..15980757, + |
Coexpression cluster: | C790_neuroectodermal_carcinoid_neuroblastoma_neuroepithelioma_acute_peripheral_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.98e-44 | 2 |
cranial nerve II | 3.28e-23 | 1 |
cranial nerve | 3.28e-23 | 1 |
nerve trunk | 3.28e-23 | 1 |
nerve connecting eye with brain | 3.28e-23 | 1 |
nerve | 3.28e-23 | 1 |
retinal neural layer | 3.28e-23 | 1 |
presumptive neural retina | 3.28e-23 | 1 |
multi cell component structure | 2.59e-12 | 2 |
neuron projection bundle | 2.59e-12 | 2 |
peripheral nervous system | 1.12e-10 | 8 |
layer of retina | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.95e-55 | 10 |
germ cell and embryonal cancer | 3.74e-25 | 22 |
germ cell cancer | 3.74e-25 | 22 |
peripheral nerve sheath neoplasm | 3.62e-12 | 2 |
neurofibroma | 3.62e-12 | 2 |
peripheral nervous system neoplasm | 1.51e-08 | 3 |