FFCP PHASE1:Hg19::chr9:79320626..79320636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158471 | |EntrezGene=158471 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25209 | |HGNC=25209 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCH2 | |UniProt=E9PCH2 | ||
|association_with_transcript=-229bp_to_ENST00000441554_5end | |association_with_transcript=-229bp_to_ENST00000441554_5end | ||
|cluster_id=chr9:79320626..79320636,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_23_at_PRUNE2_5end | |description=CAGE_peak_23_at_PRUNE2_5end | ||
|id=chr9:79320626..79320636,- | |id=chr9:79320626..79320636,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.52e-87;3 | |||
|ontology_enrichment_disease=DOID:3371!8.62e-12!1;DOID:4549!8.62e-12!1;DOID:5861!8.62e-12!1;DOID:6496!8.62e-12!1 | |ontology_enrichment_disease=DOID:3371!8.62e-12!1;DOID:4549!8.62e-12!1;DOID:5861!8.62e-12!1;DOID:6496!8.62e-12!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0004733!6.28e-40!12;UBERON:0002028!6.28e-40!12;UBERON:0007277!6.28e-40!12;UBERON:0004732!8.09e-37!13;UBERON:0003076!7.69e-32!15;UBERON:0003057!7.69e-32!15;UBERON:0002298!1.33e-30!8;UBERON:0000988!3.35e-30!3;UBERON:0002680!7.80e-28!9;UBERON:0001895!7.80e-28!9;UBERON:0010092!7.80e-28!9;UBERON:0002148!1.05e-20!2;UBERON:0009662!1.05e-20!2;UBERON:0001049!1.21e-15!57;UBERON:0005068!1.21e-15!57;UBERON:0006241!1.21e-15!57;UBERON:0007135!1.21e-15!57;UBERON:0002616!4.46e-15!59;UBERON:0006331!3.87e-14!3;UBERON:0001896!5.05e-14!3;UBERON:0005290!5.05e-14!3;UBERON:0010096!5.05e-14!3;UBERON:0007023!1.25e-12!115;UBERON:0000955!1.59e-12!69;UBERON:0006238!1.59e-12!69;UBERON:0002079!1.18e-11!1;UBERON:0001000!1.31e-11!1;UBERON:0005352!1.31e-11!1;UBERON:0002902!5.43e-11!1;UBERON:0009899!5.43e-11!1;UBERON:0001017!2.29e-10!82;UBERON:0003075!5.84e-10!86;UBERON:0007284!5.84e-10!86;UBERON:0005743!7.87e-10!86;UBERON:0002346!1.85e-09!90;UBERON:0000073!8.72e-09!94;UBERON:0001016!8.72e-09!94;UBERON:0000033!5.87e-08!123;UBERON:0002037!7.83e-08!6;UBERON:0006215!7.83e-08!6;UBERON:0000153!1.62e-07!129;UBERON:0007811!1.62e-07!129 | |ontology_enrichment_uberon=UBERON:0004733!6.28e-40!12;UBERON:0002028!6.28e-40!12;UBERON:0007277!6.28e-40!12;UBERON:0004732!8.09e-37!13;UBERON:0003076!7.69e-32!15;UBERON:0003057!7.69e-32!15;UBERON:0002298!1.33e-30!8;UBERON:0000988!3.35e-30!3;UBERON:0002680!7.80e-28!9;UBERON:0001895!7.80e-28!9;UBERON:0010092!7.80e-28!9;UBERON:0002148!1.05e-20!2;UBERON:0009662!1.05e-20!2;UBERON:0001049!1.21e-15!57;UBERON:0005068!1.21e-15!57;UBERON:0006241!1.21e-15!57;UBERON:0007135!1.21e-15!57;UBERON:0002616!4.46e-15!59;UBERON:0006331!3.87e-14!3;UBERON:0001896!5.05e-14!3;UBERON:0005290!5.05e-14!3;UBERON:0010096!5.05e-14!3;UBERON:0007023!1.25e-12!115;UBERON:0000955!1.59e-12!69;UBERON:0006238!1.59e-12!69;UBERON:0002079!1.18e-11!1;UBERON:0001000!1.31e-11!1;UBERON:0005352!1.31e-11!1;UBERON:0002902!5.43e-11!1;UBERON:0009899!5.43e-11!1;UBERON:0001017!2.29e-10!82;UBERON:0003075!5.84e-10!86;UBERON:0007284!5.84e-10!86;UBERON:0005743!7.87e-10!86;UBERON:0002346!1.85e-09!90;UBERON:0000073!8.72e-09!94;UBERON:0001016!8.72e-09!94;UBERON:0000033!5.87e-08!123;UBERON:0002037!7.83e-08!6;UBERON:0006215!7.83e-08!6;UBERON:0000153!1.62e-07!129;UBERON:0007811!1.62e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.52e-44;6!UBERON:0002680;3.59e-30;9!UBERON:0001895;3.59e-30;9!UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0004733;5.74e-23;12!UBERON:0002028;5.74e-23;12!UBERON:0004732;2.66e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.52e-44,6;UBERON:0006215,1.52e-44,6;UBERON:0002680,3.59e-30,9;UBERON:0001895,3.59e-30,9;UBERON:0010092,3.59e-30,9;UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0004733,5.74e-23,12;UBERON:0002028,5.74e-23,12;UBERON:0007277,5.74e-23,12;UBERON:0004732,2.66e-21,13;UBERON:0003076,1.24e-18,15;UBERON:0003057,1.24e-18,15 | |||
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|short_description=p23@PRUNE2 | |short_description=p23@PRUNE2 | ||
}} | }} |
Latest revision as of 22:00, 17 September 2015
Short description: | p23@PRUNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PRUNE2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -229bp_to_ENST00000441554_5end |
EntrezGene: | PRUNE2 |
HGNC: | 25209 |
UniProt: | E9PCH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.52e-44 | 6 |
rhombic lip | 1.52e-44 | 6 |
regional part of metencephalon | 3.59e-30 | 9 |
metencephalon | 3.59e-30 | 9 |
future metencephalon | 3.59e-30 | 9 |
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
segmental subdivision of hindbrain | 5.74e-23 | 12 |
hindbrain | 5.74e-23 | 12 |
presumptive hindbrain | 5.74e-23 | 12 |
segmental subdivision of nervous system | 2.66e-21 | 13 |
posterior neural tube | 1.24e-18 | 15 |
chordal neural plate | 1.24e-18 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |